Experiment set1H15 for Dechlorosoma suillum PS

Compare to:

rich media

200 most important genes:

  gene name fitness t score description  
Dsui_0401 -4.2 -2.9 nucleoside-diphosphate-sugar epimerase compare
Dsui_3457 -3.6 -2.4 K+ transporter compare
Dsui_0600 -3.0 -2.0 TIGR00251 family protein compare
Dsui_2981 -2.7 -1.8 electron transport complex, RnfABCDGE type, C subunit compare
Dsui_1827 -2.6 -2.4 hypothetical protein compare
Dsui_0039 -2.4 -3.2 dimethyladenosine transferase compare
Dsui_3484 -2.1 -2.0 putative permease compare
Dsui_3081 -1.9 -1.8 chaperone protein DnaK compare
Dsui_3130 -1.9 -1.7 tRNA-Leu compare
Dsui_1577 -1.9 -1.8 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_3220 -1.9 -2.2 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_0992 -1.8 -2.4 putative membrane protein compare
Dsui_1578 -1.7 -4.3 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_1947 -1.7 -2.2 nucleotide sugar dehydrogenase compare
Dsui_0500 -1.7 -3.2 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_0007 -1.7 -1.9 cold shock protein compare
Dsui_1002 -1.5 -1.4 prolyl oligopeptidase family protein compare
Dsui_2610 -1.5 -3.4 single-stranded DNA-binding protein compare
Dsui_2098 -1.5 -1.3 hypothetical protein compare
Dsui_2554 -1.5 -2.3 hypothetical protein compare
Dsui_1445 -1.5 -3.1 succinyl-CoA synthetase, beta subunit compare
Dsui_2556 -1.4 -3.2 hypothetical protein compare
Dsui_2272 -1.4 -2.3 hypothetical protein compare
Dsui_0469 -1.4 -1.9 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_3054 -1.4 -1.9 phosphate ABC transporter, permease protein PstA compare
Dsui_0465 -1.4 -2.3 ADP-heptose:LPS heptosyltransferase compare
Dsui_0651 -1.4 -2.4 tyrosine recombinase XerC compare
Dsui_3240 -1.4 -6.1 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_2606 -1.4 -3.0 soluble lytic murein transglycosylase-like protein compare
Dsui_2086 -1.4 -1.6 cytochrome c compare
Dsui_0685 -1.4 -2.0 glutathione S-transferase compare
Dsui_3467 -1.4 -2.3 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_2611 -1.4 -2.8 hypothetical protein compare
Dsui_0725 -1.3 -2.6 putative hydrolase of the alpha/beta superfamily compare
Dsui_2189 -1.3 -2.9 acyl-CoA synthetase (NDP forming) compare
Dsui_3156 -1.3 -2.7 putative permease compare
Dsui_0862 -1.3 -2.1 hypothetical protein compare
Dsui_2642 -1.3 -2.7 outer membrane protein compare
Dsui_2599 -1.3 -2.2 hypothetical protein compare
Dsui_2563 -1.3 -2.6 hypothetical protein compare
Dsui_3080 -1.2 -1.2 molecular chaperone GrpE (heat shock protein) compare
Dsui_2614 -1.2 -2.8 hypothetical protein compare
Dsui_0099 -1.2 -3.0 putative periplasmic or secreted lipoprotein compare
Dsui_0747 -1.2 -2.4 glutamate--cysteine ligase compare
Dsui_2781 -1.2 -2.3 PAS domain S-box compare
Dsui_0859 -1.2 -1.3 hypothetical protein compare
Dsui_1275 -1.1 -2.7 protein-export chaperone SecB compare
Dsui_2567 -1.1 -9.3 hypothetical protein compare
Dsui_1581 -1.1 -2.2 response regulator compare
Dsui_2608 -1.1 -4.5 topoisomerase IA compare
Dsui_2593 -1.1 -4.1 PilS N terminal protein compare
Dsui_2585 -1.1 -4.3 type IV secretory pathway, component VirB8 compare
Dsui_0554 -1.1 -1.6 uncharacterized conserved small protein containing a coiled-coil domain compare
Dsui_3377 -1.1 -1.4 Uncharacterized protein conserved in bacteria (DUF2325) compare
Dsui_1891 -1.1 -1.9 enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase compare
Dsui_3295 -1.1 -2.9 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Dsui_1266 -1.1 -2.1 transcriptional regulator NrdR compare
Dsui_1629 -1.1 -1.5 Cbb3-type cytochrome oxidase, subunit 3 compare
Dsui_2030 -1.1 -1.9 branched-chain amino acid aminotransferase, group I compare
Dsui_0477 -1.1 -2.5 tol-pal system protein YbgF compare
Dsui_2295 -1.0 -1.6 transcriptional regulator compare
Dsui_1325 -1.0 -2.8 ADP-ribose pyrophosphatase compare
Dsui_2604 -1.0 -2.0 hypothetical protein compare
Dsui_3495 -1.0 -1.2 FKBP-type peptidyl-prolyl cis-trans isomerase compare
Dsui_0744 -1.0 -2.5 phosphotransferase system, mannose/fructose-specific component IIA compare
Dsui_1970 -1.0 -2.6 metalloendopeptidase-like membrane protein compare
Dsui_0434 -1.0 -2.1 ribonuclease, Rne/Rng family compare
Dsui_0255 -0.9 -1.0 hypothetical protein compare
Dsui_0811 -0.9 -3.5 hypothetical protein compare
Dsui_1955 -0.9 -2.9 3'-5' exonuclease compare
Dsui_2873 -0.9 -1.2 Peroxiredoxin compare
Dsui_3118 -0.9 -1.9 polyferredoxin compare
Dsui_2577 -0.9 -5.0 type IV secretory pathway, VirB4 component compare
Dsui_1235 -0.9 -1.2 hypothetical protein compare
Dsui_3474 -0.9 -2.3 chemotaxis protein histidine kinase-like protein compare
Dsui_2298 -0.8 -2.4 putative thioesterase compare
Dsui_3239 -0.8 -5.7 acetyl-CoA acetyltransferase compare
Dsui_2269 -0.8 -2.3 SOS regulatory protein LexA compare
Dsui_0745 -0.8 -1.0 membrane-associated lipoprotein involved in thiamine biosynthesis compare
Dsui_1530 -0.8 -1.3 hypothetical protein compare
Dsui_2576 -0.8 -3.0 hypothetical protein compare
Dsui_2631 -0.8 -2.4 hypothetical protein compare
Dsui_2590 -0.8 -2.0 Pilin accessory protein (PilO) compare
Dsui_2579 -0.8 -4.0 Flp pilus assembly protein, ATPase CpaF compare
Dsui_2342 -0.8 -1.9 multidrug resistance efflux pump compare
Dsui_2651 -0.8 -1.4 ankyrin repeat-containing protein compare
Dsui_2634 -0.8 -1.7 cytochrome c, mono- and diheme variants family compare
Dsui_2615 -0.8 -2.9 hypothetical protein compare
Dsui_2305 -0.8 -3.5 electron transfer flavoprotein, beta subunit compare
Dsui_0260 -0.8 -3.5 sulfate ABC transporter, permease protein CysT compare
Dsui_0704 -0.8 -3.9 RNA polymerase sigma-54 factor compare
Dsui_0978 -0.8 -2.3 2-hydroxychromene-2-carboxylate isomerase compare
Dsui_2443 -0.8 -0.8 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_1525 -0.8 -3.6 sulfate/thiosulfate-binding protein compare
Dsui_2240 -0.8 -2.0 PAS domain S-box compare
Dsui_2745 -0.8 -1.5 methyl-accepting chemotaxis protein compare
Dsui_1771 -0.8 -4.2 hypothetical protein compare
Dsui_1084 -0.8 -4.4 bacteriophage protein gp37 compare
Dsui_2304 -0.7 -2.6 electron transfer flavoprotein, alpha subunit compare
Dsui_0174 -0.7 -1.1 hypothetical protein compare
Dsui_0656 -0.7 -4.6 chemotaxis protein histidine kinase-like protein compare
Dsui_1316 -0.7 -1.4 hypothetical protein compare
Dsui_2600 -0.7 -1.3 hypothetical protein compare
Dsui_2592 -0.7 -3.5 type II secretory pathway, component PulF compare
Dsui_0569 -0.7 -1.4 hypothetical protein compare
Dsui_1702 -0.7 -1.4 TonB family protein compare
Dsui_2605 -0.7 -4.3 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3424 -0.7 -1.5 ATP:cob(I)alamin adenosyltransferase compare
Dsui_0435 -0.7 -1.5 Sel1 repeat protein compare
Dsui_1796 -0.7 -4.0 phage/plasmid-related protein TIGR03299 compare
Dsui_0543 -0.7 -2.5 malic enzyme compare
Dsui_2621 -0.7 -4.4 ATPase involved in chromosome partitioning compare
Dsui_2333 -0.7 -1.4 uracil phosphoribosyltransferase compare
Dsui_2137 -0.7 -1.4 queuosine biosynthesis protein QueD compare
Dsui_3455 -0.7 -2.2 HD-GYP domain-containing protein compare
Dsui_3415 -0.7 -3.3 FAD/FMN-dependent dehydrogenase compare
Dsui_2177 -0.7 -1.0 methyltransferase family protein compare
Dsui_1833 -0.7 -1.9 nitrate transport ATP-binding subunits C and D compare
Dsui_2601 -0.7 -1.7 hypothetical protein compare
Dsui_2603 -0.7 -2.6 hypothetical protein compare
Dsui_2122 -0.7 -2.1 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component compare
Dsui_2560 -0.7 -1.5 zonula occludens toxin compare
Dsui_2846 -0.7 -4.6 ATPase compare
Dsui_3102 -0.7 -1.3 molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial compare
Dsui_0549 -0.7 -2.2 queuosine biosynthesis protein QueC compare
Dsui_1495 -0.7 -1.9 molecular chaperone (small heat shock protein) compare
Dsui_3352 -0.7 -1.2 cAMP-binding protein compare
Dsui_2752 -0.7 -1.1 ABC-type multidrug transport system, ATPase and permease component compare
Dsui_2535 -0.7 -2.5 putative divalent heavy-metal cations transporter compare
Dsui_2594 -0.7 -2.5 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_2575 -0.7 -3.7 hypothetical protein compare
Dsui_3210 -0.7 -1.7 hypothetical protein compare
Dsui_2583 -0.7 -2.1 hypothetical protein compare
Dsui_0901 -0.7 -2.4 hypothetical protein compare
Dsui_0259 -0.7 -2.5 sulfate ABC transporter, permease protein CysW compare
Dsui_2101 -0.7 -1.9 hypothetical protein compare
Dsui_2908 -0.7 -1.9 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_1391 -0.6 -1.5 hypothetical protein compare
Dsui_1609 -0.6 -1.2 Thiopurine S-methyltransferase (TPMT) compare
Dsui_0044 -0.6 -1.3 exodeoxyribonuclease III compare
Dsui_3231 -0.6 -1.8 hypothetical protein compare
Dsui_0085 -0.6 -5.1 GDP-mannose 4,6-dehydratase compare
Dsui_1646 -0.6 -1.3 cAMP-binding protein compare
Dsui_0398 -0.6 -2.6 UDP-glucose-4-epimerase compare
Dsui_1579 -0.6 -3.4 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_2828 -0.6 -1.8 hypothetical protein compare
Dsui_2668 -0.6 -1.1 putative phosphatase compare
Dsui_0520 -0.6 -3.3 transcriptional regulator compare
Dsui_1797 -0.6 -2.1 putative phage-type endonuclease compare
Dsui_3270 -0.6 -1.9 2'-5' RNA ligase compare
Dsui_1669 -0.6 -1.2 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_2559 -0.6 -1.4 Protein of unknown function (DUF2523) compare
Dsui_2484 -0.6 -1.1 hydroxyacylglutathione hydrolase compare
Dsui_1446 -0.6 -1.1 succinyl-CoA synthetase, alpha subunit compare
Dsui_0476 -0.6 -1.8 organic radical activating enzyme compare
Dsui_2571 -0.6 -3.5 hypothetical protein compare
Dsui_2589 -0.6 -2.8 type II secretory pathway, component PulD compare
Dsui_0734 -0.6 -1.4 acetyltransferase compare
Dsui_3414 -0.6 -2.8 FAD/FMN-dependent dehydrogenase compare
Dsui_1818 -0.6 -2.1 anthranilate phosphoribosyltransferase compare
Dsui_2587 -0.6 -3.5 type IV secretory pathway, VirB10 component compare
Dsui_0657 -0.6 -3.3 methyl-accepting chemotaxis protein compare
Dsui_1037 -0.6 -0.6 ribosomal protein L25, Ctc-form compare
Dsui_2644 -0.6 -1.7 heavy metal response regulator compare
Dsui_1675 -0.6 -0.8 hypothetical protein compare
Dsui_1641 -0.6 -2.2 SirA-like protein compare
Dsui_2355 -0.6 -1.1 cytochrome B561 compare
Dsui_3133 -0.6 -0.6 hypothetical protein compare
Dsui_2256 -0.6 -1.6 flavodoxin reductase family protein compare
Dsui_2629 -0.6 -3.6 HD-GYP domain-containing protein compare
Dsui_0707 -0.6 -1.4 protein RecA compare
Dsui_2597 -0.6 -3.4 tyrosine recombinase XerD compare
Dsui_2167 -0.6 -1.5 TonB-dependent siderophore receptor compare
Dsui_2620 -0.6 -3.0 hypothetical protein compare
Dsui_0087 -0.6 -4.3 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
Dsui_2783 -0.6 -1.1 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2591 -0.5 -1.8 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_3069 -0.5 -1.4 putative membrane protein compare
Dsui_2042 -0.5 -1.0 cystathionine beta-lyase/cystathionine gamma-synthase compare
Dsui_3524 -0.5 -1.9 signal transduction histidine kinase compare
Dsui_1770 -0.5 -3.4 hypothetical protein compare
Dsui_0176 -0.5 -1.6 ribosome modulation factor compare
Dsui_2238 -0.5 -1.4 ABC-type dipeptide transport system, periplasmic component compare
Dsui_2641 -0.5 -2.0 putative multicopper oxidase compare
Dsui_3394 -0.5 -2.3 P-type ATPase, translocating compare
Dsui_2553 -0.5 -1.7 Phage X family/Phage replication protein CRI compare
Dsui_0658 -0.5 -1.5 chemotaxis signal transduction protein compare
Dsui_3009 -0.5 -1.5 Ni,Fe-hydrogenase I large subunit compare
Dsui_1388 -0.5 -1.3 hypothetical protein compare
Dsui_1643 -0.5 -1.4 uncharacterized protein involved in response to NO compare
Dsui_0953 -0.5 -1.4 ADP-ribosyl-(dinitrogen reductase) hydrolase compare
Dsui_0687 -0.5 -1.0 Protein of unknown function (DUF2905) compare
Dsui_1828 -0.5 -1.7 response regulator with putative antiterminator output domain compare
Dsui_2433 -0.5 -2.6 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_0021 -0.5 -1.1 putative metalloendopeptidase compare
Dsui_0505 -0.5 -2.6 7-cyano-7-deazaguanine reductase compare
Dsui_0292 -0.5 -1.2 putative signal transduction protein containing EAL and modified HD-GYP domains compare
Dsui_1606 -0.5 -1.7 periplasmic serine protease, Do/DeqQ family compare
Dsui_2454 -0.5 -1.9 Positive regulator of sigma E activity compare
Dsui_2853 -0.5 -1.7 PPIC-type PPIASE family protein compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in alp rich experiments