Experiment set1H13 for Dechlorosoma suillum PS

Compare to:

rich media

200 most important genes:

  gene name fitness t score description  
Dsui_0401 -3.9 -2.7 nucleoside-diphosphate-sugar epimerase compare
Dsui_3290 -2.8 -2.6 4-hydroxybenzoate synthetase (chorismate lyase) compare
Dsui_0465 -2.5 -2.9 ADP-heptose:LPS heptosyltransferase compare
Dsui_0990 -2.4 -1.3 putative P-loop-containing kinase compare
Dsui_2981 -2.4 -1.6 electron transport complex, RnfABCDGE type, C subunit compare
Dsui_3080 -2.3 -1.8 molecular chaperone GrpE (heat shock protein) compare
Dsui_2562 -2.2 -2.4 hypothetical protein compare
Dsui_1578 -2.1 -4.4 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_3508 -2.1 -1.4 exodeoxyribonuclease VII, small subunit compare
Dsui_1381 -2.0 -1.3 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family compare
Dsui_1581 -1.9 -2.2 response regulator compare
Dsui_0706 -1.9 -1.8 hypothetical protein compare
Dsui_2265 -1.8 -2.9 DNA-directed DNA polymerase III PolC compare
Dsui_3484 -1.8 -1.7 putative permease compare
Dsui_0175 -1.8 -2.7 hypothetical protein compare
Dsui_1827 -1.8 -1.5 hypothetical protein compare
Dsui_2466 -1.7 -2.2 ATP dependent DNA ligase-like protein compare
Dsui_1970 -1.7 -3.7 metalloendopeptidase-like membrane protein compare
Dsui_0745 -1.7 -1.9 membrane-associated lipoprotein involved in thiamine biosynthesis compare
Dsui_0025 -1.7 -1.7 hypothetical protein compare
Dsui_3081 -1.6 -1.5 chaperone protein DnaK compare
Dsui_1004 -1.6 -1.0 conserved protein of DIM6/NTAB family compare
Dsui_3181 -1.6 -1.2 RND family efflux transporter, MFP subunit compare
Dsui_0725 -1.6 -2.9 putative hydrolase of the alpha/beta superfamily compare
Dsui_0469 -1.5 -1.7 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_0613 -1.5 -1.1 uncharacterized protein SCO1/SenC/PrrC compare
Dsui_2617 -1.4 -1.7 DNA recombination-dependent growth factor C compare
Dsui_0255 -1.4 -1.3 hypothetical protein compare
Dsui_2867 -1.4 -2.1 surface antigen family protein compare
Dsui_0747 -1.4 -2.8 glutamate--cysteine ligase compare
Dsui_0173 -1.4 -2.4 site-specific DNA methylase compare
Dsui_1325 -1.4 -3.3 ADP-ribose pyrophosphatase compare
Dsui_2556 -1.4 -3.3 hypothetical protein compare
Dsui_2123 -1.4 -2.0 EAL domain-containing protein compare
Dsui_0543 -1.3 -4.5 malic enzyme compare
Dsui_2304 -1.3 -3.9 electron transfer flavoprotein, alpha subunit compare
Dsui_1682 -1.3 -2.1 biopolymer transport protein compare
Dsui_2443 -1.3 -2.0 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_0992 -1.3 -1.9 putative membrane protein compare
Dsui_3133 -1.3 -1.2 hypothetical protein compare
Dsui_2151 -1.2 -2.7 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
Dsui_1835 -1.2 -2.5 glycosyltransferase compare
Dsui_1897 -1.2 -1.8 hypothetical protein compare
Dsui_1670 -1.2 -1.8 cytochrome c peroxidase compare
Dsui_2933 -1.2 -2.0 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_3351 -1.2 -1.8 cytochrome c peroxidase compare
Dsui_1392 -1.2 -2.6 type II secretory pathway, component PulF compare
Dsui_1947 -1.1 -1.5 nucleotide sugar dehydrogenase compare
Dsui_3352 -1.1 -2.0 cAMP-binding protein compare
Dsui_2043 -1.1 -2.3 cysteine synthase compare
Dsui_2887 -1.1 -2.7 hypothetical protein compare
Dsui_2053 -1.1 -1.7 HNH endonuclease compare
Dsui_0425 -1.1 -2.8 putative Fe-S oxidoreductase compare
Dsui_2703 -1.1 -2.4 chromosome segregation protein SMC compare
Dsui_2355 -1.1 -1.6 cytochrome B561 compare
Dsui_1605 -1.1 -2.6 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II compare
Dsui_0675 -1.1 -1.3 putative dithiol-disulfide isomerase involved in polyketide biosynthesis compare
Dsui_0434 -1.1 -2.4 ribonuclease, Rne/Rng family compare
Dsui_0500 -1.1 -2.7 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_2609 -1.1 -1.8 hypothetical protein compare
Dsui_0499 -1.1 -1.5 DNA-directed RNA polymerase, omega subunit compare
Dsui_1119 -1.1 -3.8 glutathione peroxidase compare
Dsui_1644 -1.0 -2.3 hypothetical protein compare
Dsui_1356 -1.0 -1.4 hypothetical protein compare
Dsui_2080 -1.0 -1.6 response regulator compare
Dsui_3150 -1.0 -2.1 electron transfer flavoprotein, beta subunit compare
Dsui_3231 -1.0 -2.9 hypothetical protein compare
Dsui_0007 -1.0 -1.1 cold shock protein compare
Dsui_0901 -1.0 -2.9 hypothetical protein compare
Dsui_0552 -1.0 -1.9 nitrogen fixation protein NifX compare
Dsui_3349 -1.0 -1.9 hypothetical protein compare
Dsui_2752 -1.0 -1.5 ABC-type multidrug transport system, ATPase and permease component compare
Dsui_1955 -1.0 -2.9 3'-5' exonuclease compare
Dsui_0981 -1.0 -3.3 enoyl-CoA hydratase/carnithine racemase compare
Dsui_1304 -1.0 -2.6 cytochrome c553 compare
Dsui_2025 -0.9 -2.2 RND family efflux transporter, MFP subunit compare
Dsui_3240 -0.9 -4.6 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_1523 -0.9 -2.5 drug resistance transporter, EmrB/QacA subfamily compare
Dsui_1025 -0.9 -3.1 putative Zn-dependent peptidase compare
Dsui_0252 -0.9 -1.2 TIGR00252 family protein compare
Dsui_1577 -0.9 -1.0 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_2919 -0.9 -1.2 addiction module antidote protein, HigA family compare
Dsui_0477 -0.9 -1.1 tol-pal system protein YbgF compare
Dsui_0259 -0.9 -2.5 sulfate ABC transporter, permease protein CysW compare
Dsui_2560 -0.9 -1.5 zonula occludens toxin compare
Dsui_1894 -0.8 -2.1 E3 Ubiquitin ligase compare
Dsui_2126 -0.8 -1.2 alanine dehydrogenase compare
Dsui_0744 -0.8 -1.7 phosphotransferase system, mannose/fructose-specific component IIA compare
Dsui_2429 -0.8 -2.4 putative permease compare
Dsui_2348 -0.8 -1.9 hypothetical protein compare
Dsui_2935 -0.8 -1.5 NAD/NADP transhydrogenase alpha subunit compare
Dsui_3382 -0.8 -2.0 universal stress protein UspA-like protein compare
Dsui_2600 -0.8 -2.0 hypothetical protein compare
Dsui_0021 -0.8 -1.3 putative metalloendopeptidase compare
Dsui_1442 -0.8 -1.5 putative efflux protein, MATE family compare
Dsui_2999 -0.8 -2.8 histidine kinase,HAMP domain-containing protein,histidine kinase compare
Dsui_3504 -0.8 -2.2 rhodanese-related sulfurtransferase compare
Dsui_2567 -0.8 -6.7 hypothetical protein compare
Dsui_1702 -0.8 -1.6 TonB family protein compare
Dsui_1599 -0.8 -2.8 putative enzyme of heme biosynthesis compare
Dsui_3436 -0.8 -1.4 beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase compare
Dsui_1530 -0.8 -1.5 hypothetical protein compare
Dsui_2430 -0.8 -1.8 tRNA-Asn compare
Dsui_0032 -0.8 -1.1 NAD-dependent protein deacetylase, SIR2 family compare
Dsui_2191 -0.8 -1.3 squalene-associated FAD-dependent desaturase compare
Dsui_2586 -0.8 -1.8 type IV secretory pathway, VirB9 component compare
Dsui_0660 -0.8 -2.5 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0520 -0.8 -4.8 transcriptional regulator compare
Dsui_3467 -0.8 -1.4 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_2768 -0.8 -2.1 uncharacterized protein involved in outer membrane biogenesis compare
Dsui_0656 -0.8 -4.9 chemotaxis protein histidine kinase-like protein compare
Dsui_0537 -0.8 -1.4 conserved protein of DIM6/NTAB family compare
Dsui_2032 -0.8 -1.4 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3442 -0.7 -2.4 NADH dehydrogenase, FAD-containing subunit compare
Dsui_2137 -0.7 -0.8 queuosine biosynthesis protein QueD compare
Dsui_3063 -0.7 -1.3 transcription elongation factor GreA compare
Dsui_2594 -0.7 -3.1 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_0223 -0.7 -3.9 methylase involved in ubiquinone/menaquinone biosynthesis compare
Dsui_2601 -0.7 -2.0 hypothetical protein compare
Dsui_1040 -0.7 -3.3 glutamyl-queuosine tRNA(Asp) synthetase compare
Dsui_2150 -0.7 -2.3 hypothetical protein compare
Dsui_3532 -0.7 -2.3 Protein of unknown function (DUF3106) compare
Dsui_2745 -0.7 -1.4 methyl-accepting chemotaxis protein compare
Dsui_0177 -0.7 -1.8 hypothetical protein compare
Dsui_2666 -0.7 -1.5 putative transcriptional regulator compare
Dsui_1125 -0.7 -3.2 Malonyl-CoA decarboxylase (MCD) compare
Dsui_1275 -0.7 -1.5 protein-export chaperone SecB compare
Dsui_2368 -0.7 -2.2 serine O-acetyltransferase compare
Dsui_0648 -0.7 -2.5 acetyltransferase compare
Dsui_1928 -0.7 -1.8 cytochrome c, mono- and diheme variants family compare
Dsui_0538 -0.7 -1.2 hypothetical protein compare
Dsui_2305 -0.7 -3.2 electron transfer flavoprotein, beta subunit compare
Dsui_2189 -0.7 -1.6 acyl-CoA synthetase (NDP forming) compare
Dsui_3054 -0.7 -1.0 phosphate ABC transporter, permease protein PstA compare
Dsui_2585 -0.7 -3.2 type IV secretory pathway, component VirB8 compare
Dsui_3424 -0.7 -1.4 ATP:cob(I)alamin adenosyltransferase compare
Dsui_0001 -0.7 -2.8 aminodeoxychorismate synthase, component I compare
Dsui_0530 -0.7 -2.3 ABC-type Fe3+-siderophore transport system, permease component compare
Dsui_0003 -0.7 -1.8 putative Zn-dependent protease compare
Dsui_2295 -0.7 -1.2 transcriptional regulator compare
Dsui_1221 -0.7 -2.4 hypothetical protein compare
Dsui_1609 -0.7 -1.1 Thiopurine S-methyltransferase (TPMT) compare
Dsui_3163 -0.7 -3.3 putative membrane protein compare
Dsui_0549 -0.7 -2.0 queuosine biosynthesis protein QueC compare
Dsui_1409 -0.7 -3.1 cation diffusion facilitator family transporter compare
Dsui_3257 -0.7 -3.3 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities compare
Dsui_0998 -0.7 -1.5 A/G-specific adenine glycosylase compare
Dsui_1482 -0.7 -1.8 hypothetical protein compare
Dsui_3457 -0.7 -0.6 K+ transporter compare
Dsui_0492 -0.7 -1.8 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family compare
Dsui_2230 -0.7 -1.7 conserved hypothetical integral membrane protein compare
Dsui_3127 -0.7 -2.2 23S RNA-specific pseudouridylate synthase compare
Dsui_1855 -0.7 -1.1 hypothetical protein compare
Dsui_3072 -0.7 -1.7 DNA repair protein RecN compare
Dsui_1624 -0.7 -3.1 dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein compare
Dsui_2615 -0.7 -2.5 hypothetical protein compare
Dsui_2908 -0.7 -1.5 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_0726 -0.7 -2.5 ferredoxin compare
Dsui_2327 -0.6 -2.3 putative toxin-antitoxin system toxin component, PIN family compare
Dsui_2454 -0.6 -2.1 Positive regulator of sigma E activity compare
Dsui_2592 -0.6 -2.7 type II secretory pathway, component PulF compare
Dsui_1251 -0.6 -1.4 acylphosphatase compare
Dsui_1271 -0.6 -3.3 membrane-bound metallopeptidase compare
Dsui_0412 -0.6 -1.5 ABC-type dipeptide/oligopeptide/nickel transport system, permease component compare
Dsui_1891 -0.6 -1.3 enolase superfamily enzyme related to L-alanine-DL-glutamate epimerase compare
Dsui_1206 -0.6 -2.5 hypothetical protein compare
Dsui_0275 -0.6 -1.6 conserved hypothetical protein, proteobacterial compare
Dsui_1882 -0.6 -2.4 hypothetical protein compare
Dsui_3151 -0.6 -1.2 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3208 -0.6 -2.6 cysteine synthase A compare
Dsui_0024 -0.6 -1.2 cytochrome c556 compare
Dsui_1463 -0.6 -1.7 transcriptional activator of acetoin/glycerol metabolism compare
Dsui_1413 -0.6 -2.1 chromate transport protein ChrA compare
Dsui_2599 -0.6 -1.0 hypothetical protein compare
Dsui_2578 -0.6 -1.2 hypothetical protein compare
Dsui_2398 -0.6 -1.3 hypothetical protein compare
Dsui_2603 -0.6 -2.5 hypothetical protein compare
Dsui_2893 -0.6 -2.3 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_0740 -0.6 -3.1 methionine biosynthesis protein MetW compare
Dsui_2781 -0.6 -1.2 PAS domain S-box compare
Dsui_0558 -0.6 -1.9 tetratricopeptide repeat protein compare
Dsui_0811 -0.6 -2.4 hypothetical protein compare
Dsui_3179 -0.6 -1.5 signal transduction histidine kinase compare
Dsui_0954 -0.6 -1.5 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) compare
Dsui_0651 -0.6 -1.2 tyrosine recombinase XerC compare
Dsui_0476 -0.6 -1.6 organic radical activating enzyme compare
Dsui_0671 -0.6 -2.4 arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase compare
Dsui_2083 -0.6 -2.2 hypothetical protein compare
Dsui_3099 -0.6 -0.9 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase compare
Dsui_0860 -0.6 -1.6 hypothetical protein compare
Dsui_3415 -0.6 -3.1 FAD/FMN-dependent dehydrogenase compare
Dsui_1658 -0.6 -1.2 uncharacterized protein probably involved in high-affinity Fe2+ transport compare
Dsui_0797 -0.6 -1.6 protein of unknown function (DUF1840) compare
Dsui_0087 -0.6 -3.5 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
Dsui_1879 -0.6 -1.3 luciferase family oxidoreductase, group 1 compare
Dsui_1669 -0.6 -0.7 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_0978 -0.6 -1.1 2-hydroxychromene-2-carboxylate isomerase compare
Dsui_0900 -0.6 -2.9 branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase compare
Dsui_1494 -0.6 -3.2 ATP-dependent metalloprotease FtsH compare
Dsui_1401 -0.6 -1.9 surface lipoprotein compare


Specific Phenotypes

None in this experiment

For Dechlorosoma suillum PS in alp rich experiments