Experiment set1H12 for Dechlorosoma suillum PS

Compare to:

rich media with sodium chlorite 0.16 mM

200 most important genes:

  gene name fitness t score description  
Dsui_1321 -5.4 -7.4 ABC-type uncharacterized transport system, permease component compare
Dsui_1653 -4.8 -5.7 ferrous iron transporter FeoB compare
Dsui_3457 -3.5 -2.4 K+ transporter compare
Dsui_1652 -3.2 -2.1 FeoA-like protein compare
Dsui_0859 -3.0 -2.8 hypothetical protein compare
Dsui_0401 -2.9 -2.7 nucleoside-diphosphate-sugar epimerase compare
Dsui_1970 -2.7 -5.2 metalloendopeptidase-like membrane protein compare
Dsui_0990 -2.6 -1.3 putative P-loop-containing kinase compare
Dsui_3080 -2.6 -1.9 molecular chaperone GrpE (heat shock protein) compare
Dsui_1529 -2.6 -4.0 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_3520 -2.4 -13.0 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_3521 -2.4 -6.8 membrane-fusion protein compare
Dsui_1578 -2.4 -5.0 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_1304 -2.3 -4.8 cytochrome c553 compare
Dsui_1577 -2.1 -1.9 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_1947 -1.9 -2.2 nucleotide sugar dehydrogenase compare
Dsui_3524 -1.9 -5.0 signal transduction histidine kinase compare
Dsui_2466 -1.8 -2.7 ATP dependent DNA ligase-like protein compare
Dsui_2152 -1.8 -3.9 molybdenum cofactor synthesis domain protein compare
Dsui_0469 -1.8 -2.3 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_2137 -1.7 -2.7 queuosine biosynthesis protein QueD compare
Dsui_1894 -1.4 -3.3 E3 Ubiquitin ligase compare
Dsui_3484 -1.4 -1.5 putative permease compare
Dsui_3531 -1.4 -2.0 Protein of unknown function (DUF3619) compare
Dsui_0465 -1.3 -2.3 ADP-heptose:LPS heptosyltransferase compare
Dsui_1893 -1.3 -2.2 putative membrane protein compare
Dsui_0153 -1.3 -13.2 cupin domain-containing protein compare
Dsui_0255 -1.2 -1.1 hypothetical protein compare
Dsui_0860 -1.2 -3.1 hypothetical protein compare
Dsui_0992 -1.2 -1.8 putative membrane protein compare
Dsui_1445 -1.2 -2.9 succinyl-CoA synthetase, beta subunit compare
Dsui_2306 -1.2 -1.9 transcriptional regulator compare
Dsui_2781 -1.2 -1.9 PAS domain S-box compare
Dsui_0398 -1.2 -4.7 UDP-glucose-4-epimerase compare
Dsui_3464 -1.2 -2.3 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component compare
Dsui_0409 -1.2 -3.3 RND family efflux transporter, MFP subunit compare
Dsui_1860 -1.1 -2.6 methyl-accepting chemotaxis protein compare
Dsui_0552 -1.1 -2.4 nitrogen fixation protein NifX compare
Dsui_3532 -1.1 -3.3 Protein of unknown function (DUF3106) compare
Dsui_1381 -1.1 -1.0 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family compare
Dsui_2560 -1.1 -1.8 zonula occludens toxin compare
Dsui_0621 -1.1 -2.0 RNA polymerase sigma factor, sigma-70 family compare
Dsui_2651 -1.1 -1.6 ankyrin repeat-containing protein compare
Dsui_2226 -1.1 -2.3 DNA-binding domain-containing protein, AraC-type compare
Dsui_1827 -1.1 -1.3 hypothetical protein compare
Dsui_3139 -1.1 -2.8 outer membrane assembly lipoprotein YfgL compare
Dsui_2327 -1.1 -3.6 putative toxin-antitoxin system toxin component, PIN family compare
Dsui_0099 -1.1 -1.4 putative periplasmic or secreted lipoprotein compare
Dsui_2265 -1.1 -2.1 DNA-directed DNA polymerase III PolC compare
Dsui_0880 -1.0 -2.6 Bacterial regulatory protein, Fis family compare
Dsui_0744 -1.0 -2.5 phosphotransferase system, mannose/fructose-specific component IIA compare
Dsui_3416 -1.0 -1.3 transcriptional regulator compare
Dsui_2498 -1.0 -2.4 mercuric resistance transcriptional repressor protein MerD compare
Dsui_0520 -1.0 -5.1 transcriptional regulator compare
Dsui_2305 -1.0 -4.8 electron transfer flavoprotein, beta subunit compare
Dsui_1553 -1.0 -1.6 regulator of competence-specific genes compare
Dsui_2703 -1.0 -2.5 chromosome segregation protein SMC compare
Dsui_2590 -1.0 -3.1 Pilin accessory protein (PilO) compare
Dsui_1462 -1.0 -1.8 ABC-type antimicrobial peptide transport system, ATPase component compare
Dsui_2443 -1.0 -1.8 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_0685 -1.0 -1.9 glutathione S-transferase compare
Dsui_2153 -1.0 -4.8 molybdopterin converting factor, subunit 1 compare
Dsui_0540 -1.0 -1.8 L-threonine-O-3-phosphate decarboxylase compare
Dsui_0007 -0.9 -0.9 cold shock protein compare
Dsui_2154 -0.9 -1.3 molybdopterin converting factor, large subunit compare
Dsui_0425 -0.9 -2.8 putative Fe-S oxidoreductase compare
Dsui_2614 -0.9 -2.0 hypothetical protein compare
Dsui_1609 -0.9 -1.5 Thiopurine S-methyltransferase (TPMT) compare
Dsui_1391 -0.9 -2.1 hypothetical protein compare
Dsui_2127 -0.9 -1.3 flavodoxin reductase family protein compare
Dsui_3522 -0.9 -3.8 outer membrane protein compare
Dsui_1042 -0.9 -2.0 metal-dependent hydrolase compare
Dsui_0901 -0.9 -3.1 hypothetical protein compare
Dsui_1094 -0.9 -1.6 shikimate kinase compare
Dsui_0660 -0.9 -2.0 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2027 -0.9 -1.7 efflux transporter, outer membrane factor lipoprotein, NodT family compare
Dsui_1955 -0.9 -3.0 3'-5' exonuclease compare
Dsui_2745 -0.9 -1.7 methyl-accepting chemotaxis protein compare
Dsui_2348 -0.8 -1.6 hypothetical protein compare
Dsui_0500 -0.8 -2.1 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_2563 -0.8 -2.0 hypothetical protein compare
Dsui_2402 -0.8 -0.8 hypothetical protein compare
Dsui_2533 -0.8 -1.6 TRAP-type C4-dicarboxylate transport system, small permease component compare
Dsui_0651 -0.8 -2.0 tyrosine recombinase XerC compare
Dsui_3017 -0.8 -1.8 uncharacterized conserved small protein containing a coiled-coil domain compare
Dsui_1915 -0.8 -2.2 cytochrome bd-type quinol oxidase, subunit 1 compare
Dsui_1797 -0.8 -3.1 putative phage-type endonuclease compare
Dsui_0603 -0.8 -2.3 pyridoxal phosphate enzyme, YggS family compare
Dsui_1584 -0.8 -2.4 hypothetical protein compare
Dsui_3352 -0.8 -1.6 cAMP-binding protein compare
Dsui_0192 -0.8 -2.0 hypothetical protein compare
Dsui_1579 -0.8 -3.8 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_0122 -0.8 -2.7 D-tyrosyl-tRNA(Tyr) deacylase compare
Dsui_2617 -0.8 -1.2 DNA recombination-dependent growth factor C compare
Dsui_3523 -0.8 -1.9 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2123 -0.8 -1.5 EAL domain-containing protein compare
Dsui_2500 -0.8 -2.7 site-specific recombinase, DNA invertase Pin compare
Dsui_2519 -0.8 -4.8 methyl-accepting chemotaxis protein compare
Dsui_2767 -0.8 -1.2 glutaredoxin-like protein compare
Dsui_1004 -0.8 -0.6 conserved protein of DIM6/NTAB family compare
Dsui_2378 -0.7 -1.3 hypothetical protein compare
Dsui_0223 -0.7 -3.6 methylase involved in ubiquinone/menaquinone biosynthesis compare
Dsui_2304 -0.7 -2.8 electron transfer flavoprotein, alpha subunit compare
Dsui_2037 -0.7 -3.8 putative alpha/beta hydrolase compare
Dsui_2496 -0.7 -1.1 Membrane transport protein MerF compare
Dsui_0554 -0.7 -1.4 uncharacterized conserved small protein containing a coiled-coil domain compare
Dsui_2698 -0.7 -2.1 purine nucleoside phosphorylase compare
Dsui_3508 -0.7 -0.7 exodeoxyribonuclease VII, small subunit compare
Dsui_2783 -0.7 -1.3 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0650 -0.7 -1.7 hypothetical protein compare
Dsui_2809 -0.7 -1.3 ABC-type uncharacterized transport system, auxiliary component compare
Dsui_1515 -0.7 -2.1 poly(A) polymerase compare
Dsui_2369 -0.7 -2.3 iron-sulfur cluster assembly transcription factor IscR compare
Dsui_2033 -0.7 -2.1 transcriptional regulator compare
Dsui_2454 -0.7 -2.4 Positive regulator of sigma E activity compare
Dsui_2086 -0.7 -1.4 cytochrome c compare
Dsui_1235 -0.7 -1.5 hypothetical protein compare
Dsui_0927 -0.7 -2.1 cytochrome c551/c552 compare
Dsui_2586 -0.7 -2.2 type IV secretory pathway, VirB9 component compare
Dsui_0004 -0.7 -3.1 molybdenum cofactor biosynthesis protein MoaC compare
Dsui_1702 -0.7 -1.0 TonB family protein compare
Dsui_3151 -0.7 -1.3 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2277 -0.7 -1.5 Rhs element Vgr protein compare
Dsui_2867 -0.7 -1.0 surface antigen family protein compare
Dsui_2238 -0.7 -2.1 ABC-type dipeptide transport system, periplasmic component compare
Dsui_1494 -0.7 -3.5 ATP-dependent metalloprotease FtsH compare
Dsui_0252 -0.7 -1.3 TIGR00252 family protein compare
Dsui_0745 -0.7 -1.2 membrane-associated lipoprotein involved in thiamine biosynthesis compare
Dsui_2773 -0.7 -1.9 putative enzyme involved in biosynthesis of extracellular polysaccharides compare
Dsui_1589 -0.7 -1.4 Nucleoside-diphosphate-sugar pyrophosphorylase family protein compare
Dsui_1629 -0.7 -1.1 Cbb3-type cytochrome oxidase, subunit 3 compare
Dsui_2043 -0.7 -1.4 cysteine synthase compare
Dsui_3257 -0.7 -3.2 bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities compare
Dsui_1312 -0.7 -2.1 NTP pyrophosphohydrolase compare
Dsui_0981 -0.7 -2.3 enoyl-CoA hydratase/carnithine racemase compare
Dsui_0399 -0.7 -1.8 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
Dsui_1730 -0.7 -1.4 flagellar biosynthesis anti-sigma factor FlgM compare
Dsui_0193 -0.7 -3.6 putative phage protein, putative large terminase compare
Dsui_3240 -0.7 -3.8 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_1430 -0.7 -2.5 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2562 -0.7 -1.2 hypothetical protein compare
Dsui_3130 -0.7 -0.8 tRNA-Leu compare
Dsui_0935 -0.7 -1.6 cytochrome c5 compare
Dsui_1117 -0.6 -2.6 hemerythrin-like metal-binding domain-containing protein compare
Dsui_1650 -0.6 -4.1 copper/silver-translocating P-type ATPase compare
Dsui_0385 -0.6 -3.6 hypothetical protein compare
Dsui_3006 -0.6 -1.4 (NiFe) hydrogenase assembly chaperone, HybE family compare
Dsui_3178 -0.6 -1.6 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_3161 -0.6 -1.9 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_2741 -0.6 -1.3 PAS domain S-box compare
Dsui_2034 -0.6 -1.5 DNA gyrase inhibitor compare
Dsui_1857 -0.6 -1.1 putative permease, DMT superfamily compare
Dsui_1968 -0.6 -4.0 5''/3''-nucleotidase SurE compare
Dsui_1620 -0.6 -2.0 PAP2 (acid phosphatase) superfamily protein compare
Dsui_1275 -0.6 -1.9 protein-export chaperone SecB compare
Dsui_2559 -0.6 -1.8 Protein of unknown function (DUF2523) compare
Dsui_2191 -0.6 -0.9 squalene-associated FAD-dependent desaturase compare
Dsui_3349 -0.6 -2.2 hypothetical protein compare
Dsui_1203 -0.6 -3.0 putative metal-dependent hydrolase compare
Dsui_0810 -0.6 -2.8 signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation compare
Dsui_0893 -0.6 -1.6 rare lipoprotein A compare
Dsui_2699 -0.6 -1.8 hypoxanthine-guanine phosphoribosyltransferase compare
Dsui_0725 -0.6 -1.6 putative hydrolase of the alpha/beta superfamily compare
Dsui_2556 -0.6 -1.9 hypothetical protein compare
Dsui_1118 -0.6 -3.3 putative permease compare
Dsui_1370 -0.6 -1.8 putative permease, DMT superfamily compare
Dsui_0656 -0.6 -4.0 chemotaxis protein histidine kinase-like protein compare
Dsui_1980 -0.6 -2.4 hypothetical protein compare
Dsui_3441 -0.6 -2.6 cation/multidrug efflux pump compare
Dsui_2080 -0.6 -1.0 response regulator compare
Dsui_3090 -0.6 -2.0 hypothetical protein compare
Dsui_3485 -0.6 -3.2 signal transduction histidine kinase regulating C4-dicarboxylate transport system compare
Dsui_2567 -0.6 -5.2 hypothetical protein compare
Dsui_1273 -0.6 -2.0 Rhodanese-related sulfurtransferase compare
Dsui_2752 -0.6 -1.1 ABC-type multidrug transport system, ATPase and permease component compare
Dsui_2301 -0.6 -3.2 diguanylate cyclase (GGDEF) domain-containing protein compare
Dsui_3030 -0.6 -2.8 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit compare
Dsui_0439 -0.6 -2.5 2-nitropropane dioxygenase-like enzyme compare
Dsui_1877 -0.6 -2.2 NADH:flavin oxidoreductase compare
Dsui_2551 -0.6 -2.6 Helix-destabilising protein compare
Dsui_2243 -0.6 -1.3 hypothetical protein compare
Dsui_2601 -0.6 -1.3 hypothetical protein compare
Dsui_0139 -0.6 -5.6 hypothetical protein compare
Dsui_1221 -0.6 -1.8 hypothetical protein compare
Dsui_0379 -0.6 -4.1 indolepyruvate ferredoxin oxidreductase, alpha/beta subunit compare
Dsui_2615 -0.6 -2.5 hypothetical protein compare
Dsui_1175 -0.6 -2.5 cytochrome c-type biogenesis protein CcmI compare
Dsui_0259 -0.6 -2.3 sulfate ABC transporter, permease protein CysW compare
Dsui_3072 -0.6 -2.4 DNA repair protein RecN compare
Dsui_2887 -0.6 -1.8 hypothetical protein compare
Dsui_0557 -0.6 -1.3 NifQ compare
Dsui_2150 -0.6 -1.8 hypothetical protein compare
Dsui_2295 -0.6 -1.0 transcriptional regulator compare
Dsui_1448 -0.6 -3.0 putative ornithine cyclodeaminase, mu-crystallin compare
Dsui_2054 -0.6 -1.8 hypothetical protein compare
Dsui_3323 -0.6 -1.7 tRNA-guanine transglycosylase, queuosine-34-forming compare
Dsui_0492 -0.6 -1.5 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family compare
Dsui_2070 -0.6 -2.3 transcriptional regulator compare
Dsui_3306 -0.6 -4.1 hypothetical protein compare
Dsui_2697 -0.6 -2.9 peptide deformylase compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sodium Chlorite in Dechlorosoma suillum PS

For stress Sodium Chlorite across organisms