Experiment set1H10 for Dechlorosoma suillum PS

Compare to:

rich media with sodium chlorite 0.16 mM

200 most important genes:

  gene name fitness t score description  
Dsui_1321 -5.4 -7.5 ABC-type uncharacterized transport system, permease component compare
Dsui_1653 -4.9 -5.8 ferrous iron transporter FeoB compare
Dsui_1827 -4.1 -2.8 hypothetical protein compare
Dsui_1304 -3.5 -4.7 cytochrome c553 compare
Dsui_1652 -3.2 -2.2 FeoA-like protein compare
Dsui_1970 -3.2 -5.2 metalloendopeptidase-like membrane protein compare
Dsui_3054 -2.6 -2.7 phosphate ABC transporter, permease protein PstA compare
Dsui_1577 -2.3 -1.8 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form compare
Dsui_1381 -2.3 -1.6 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family compare
Dsui_3521 -2.3 -6.9 membrane-fusion protein compare
Dsui_3520 -2.0 -10.7 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_1947 -1.9 -1.4 nucleotide sugar dehydrogenase compare
Dsui_3524 -1.9 -5.0 signal transduction histidine kinase compare
Dsui_3457 -1.9 -1.8 K+ transporter compare
Dsui_1529 -1.9 -3.9 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_0434 -1.9 -3.9 ribonuclease, Rne/Rng family compare
Dsui_2981 -1.8 -1.6 electron transport complex, RnfABCDGE type, C subunit compare
Dsui_3351 -1.7 -2.6 cytochrome c peroxidase compare
Dsui_2117 -1.7 -2.2 acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit compare
Dsui_1534 -1.7 -1.5 ribosomal protein L33 compare
Dsui_0747 -1.7 -3.4 glutamate--cysteine ligase compare
Dsui_0255 -1.7 -1.5 hypothetical protein compare
Dsui_2867 -1.7 -2.7 surface antigen family protein compare
Dsui_2355 -1.6 -2.4 cytochrome B561 compare
Dsui_1578 -1.6 -4.2 pyruvate dehydrogenase E1 component, homodimeric type compare
Dsui_0707 -1.6 -3.3 protein RecA compare
Dsui_2752 -1.6 -2.1 ABC-type multidrug transport system, ATPase and permease component compare
Dsui_0099 -1.6 -1.5 putative periplasmic or secreted lipoprotein compare
Dsui_0745 -1.5 -2.1 membrane-associated lipoprotein involved in thiamine biosynthesis compare
Dsui_3080 -1.5 -1.5 molecular chaperone GrpE (heat shock protein) compare
Dsui_0153 -1.4 -14.2 cupin domain-containing protein compare
Dsui_3523 -1.4 -2.9 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2556 -1.4 -3.7 hypothetical protein compare
Dsui_2617 -1.4 -1.9 DNA recombination-dependent growth factor C compare
Dsui_0859 -1.4 -1.1 hypothetical protein compare
Dsui_0500 -1.4 -3.1 (p)ppGpp synthetase, RelA/SpoT family compare
Dsui_0007 -1.3 -1.8 cold shock protein compare
Dsui_1669 -1.3 -1.9 trypsin-like serine protease with C-terminal PDZ domain compare
Dsui_2034 -1.3 -2.6 DNA gyrase inhibitor compare
Dsui_1097 -1.2 -3.3 NADH/NADPH-dependent glutamate synthase small subunit compare
Dsui_2604 -1.2 -3.2 hypothetical protein compare
Dsui_0401 -1.2 -1.0 nucleoside-diphosphate-sugar epimerase compare
Dsui_0477 -1.2 -2.9 tol-pal system protein YbgF compare
Dsui_1581 -1.2 -2.1 response regulator compare
Dsui_1530 -1.2 -2.2 hypothetical protein compare
Dsui_2560 -1.1 -2.4 zonula occludens toxin compare
Dsui_2614 -1.1 -2.9 hypothetical protein compare
Dsui_1855 -1.1 -1.9 hypothetical protein compare
Dsui_0275 -1.1 -2.6 conserved hypothetical protein, proteobacterial compare
Dsui_0552 -1.1 -2.4 nitrogen fixation protein NifX compare
Dsui_3139 -1.1 -2.9 outer membrane assembly lipoprotein YfgL compare
Dsui_2330 -1.1 -2.7 3-hydroxyacyl-CoA dehydrogenase compare
Dsui_2443 -1.1 -1.9 putative metal-binding protein, possibly nucleic-acid binding protein compare
Dsui_0549 -1.1 -3.6 queuosine biosynthesis protein QueC compare
Dsui_3220 -1.0 -0.9 PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase compare
Dsui_1094 -1.0 -1.9 shikimate kinase compare
Dsui_0469 -1.0 -1.6 lipopolysaccharide heptosyltransferase III, putative compare
Dsui_2386 -1.0 -1.8 pyruvate-formate lyase-activating enzyme compare
Dsui_0399 -1.0 -2.2 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
Dsui_2286 -1.0 -1.7 putative hydrolase or acyltransferase of alpha/beta superfamily compare
Dsui_2640 -1.0 -3.7 Cytochrome c compare
Dsui_2554 -1.0 -2.2 hypothetical protein compare
Dsui_0465 -0.9 -1.9 ADP-heptose:LPS heptosyltransferase compare
Dsui_2145 -0.9 -2.3 FtsH-interacting integral membrane protein compare
Dsui_2152 -0.9 -2.3 molybdenum cofactor synthesis domain protein compare
Dsui_3240 -0.9 -5.7 cobalamin biosynthesis protein cobD/CbiB compare
Dsui_0398 -0.9 -3.9 UDP-glucose-4-epimerase compare
Dsui_1393 -0.9 -2.1 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_0862 -0.9 -1.7 hypothetical protein compare
Dsui_1170 -0.9 -0.9 heme exporter protein CcmD compare
Dsui_2095 -0.9 -2.0 methylase involved in ubiquinone/menaquinone biosynthesis compare
Dsui_2086 -0.9 -1.6 cytochrome c compare
Dsui_3467 -0.8 -1.7 response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Dsui_2615 -0.8 -3.5 hypothetical protein compare
Dsui_2454 -0.8 -1.9 Positive regulator of sigma E activity compare
Dsui_2553 -0.8 -2.5 Phage X family/Phage replication protein CRI compare
Dsui_1445 -0.8 -2.4 succinyl-CoA synthetase, beta subunit compare
Dsui_2304 -0.8 -2.8 electron transfer flavoprotein, alpha subunit compare
Dsui_1427 -0.8 -2.1 dinuclear metal center protein, YbgI/SA1388 family compare
Dsui_1839 -0.8 -1.8 hypothetical protein compare
Dsui_1004 -0.8 -0.7 conserved protein of DIM6/NTAB family compare
Dsui_3072 -0.8 -2.7 DNA repair protein RecN compare
Dsui_0520 -0.8 -4.7 transcriptional regulator compare
Dsui_3009 -0.8 -1.8 Ni,Fe-hydrogenase I large subunit compare
Dsui_0631 -0.8 -2.0 cytochrome c551/c552 compare
Dsui_3474 -0.8 -2.5 chemotaxis protein histidine kinase-like protein compare
Dsui_2562 -0.8 -1.5 hypothetical protein compare
Dsui_1316 -0.8 -2.0 hypothetical protein compare
Dsui_0176 -0.8 -1.5 ribosome modulation factor compare
Dsui_0174 -0.8 -1.1 hypothetical protein compare
Dsui_2220 -0.8 -1.2 hypothetical protein compare
Dsui_2567 -0.8 -6.4 hypothetical protein compare
Dsui_0901 -0.7 -2.3 hypothetical protein compare
Dsui_0252 -0.7 -1.5 TIGR00252 family protein compare
Dsui_0920 -0.7 -1.9 fructose-2,6-bisphosphatase compare
Dsui_2590 -0.7 -2.4 Pilin accessory protein (PilO) compare
Dsui_2673 -0.7 -1.6 hypothetical protein compare
Dsui_0543 -0.7 -3.0 malic enzyme compare
Dsui_2306 -0.7 -1.6 transcriptional regulator compare
Dsui_2043 -0.7 -1.7 cysteine synthase compare
Dsui_2606 -0.7 -2.2 soluble lytic murein transglycosylase-like protein compare
Dsui_3416 -0.7 -1.1 transcriptional regulator compare
Dsui_2933 -0.7 -1.9 heavy metal efflux pump, cobalt-zinc-cadmium compare
Dsui_1084 -0.7 -4.9 bacteriophage protein gp37 compare
Dsui_2559 -0.7 -1.9 Protein of unknown function (DUF2523) compare
Dsui_2457 -0.7 -2.8 GTP-binding protein LepA compare
Dsui_2828 -0.7 -2.4 hypothetical protein compare
Dsui_0391 -0.7 -1.2 Protein of unknown function (DUF3426) compare
Dsui_3181 -0.7 -0.7 RND family efflux transporter, MFP subunit compare
Dsui_2191 -0.7 -1.0 squalene-associated FAD-dependent desaturase compare
Dsui_2102 -0.7 -1.7 hypothetical protein compare
Dsui_1915 -0.7 -1.6 cytochrome bd-type quinol oxidase, subunit 1 compare
Dsui_2154 -0.7 -1.2 molybdopterin converting factor, large subunit compare
Dsui_2642 -0.7 -1.8 outer membrane protein compare
Dsui_3411 -0.7 -2.2 hypothetical protein compare
Dsui_2586 -0.7 -1.8 type IV secretory pathway, VirB9 component compare
Dsui_0457 -0.7 -1.5 Protein of unknown function (DUF2782) compare
Dsui_0003 -0.7 -1.9 putative Zn-dependent protease compare
Dsui_2551 -0.7 -2.6 Helix-destabilising protein compare
Dsui_0744 -0.6 -1.8 phosphotransferase system, mannose/fructose-specific component IIA compare
Dsui_0259 -0.6 -2.4 sulfate ABC transporter, permease protein CysW compare
Dsui_2811 -0.6 -1.3 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Dsui_2578 -0.6 -1.0 hypothetical protein compare
Dsui_0650 -0.6 -1.6 hypothetical protein compare
Dsui_0260 -0.6 -2.7 sulfate ABC transporter, permease protein CysT compare
Dsui_2745 -0.6 -1.0 methyl-accepting chemotaxis protein compare
Dsui_3290 -0.6 -1.1 4-hydroxybenzoate synthetase (chorismate lyase) compare
Dsui_3270 -0.6 -2.0 2'-5' RNA ligase compare
Dsui_1251 -0.6 -1.3 acylphosphatase compare
Dsui_1457 -0.6 -1.1 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
Dsui_3522 -0.6 -2.3 outer membrane protein compare
Dsui_0292 -0.6 -1.4 putative signal transduction protein containing EAL and modified HD-GYP domains compare
Dsui_2601 -0.6 -1.8 hypothetical protein compare
Dsui_3030 -0.6 -3.1 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit compare
Dsui_2599 -0.6 -1.6 hypothetical protein compare
Dsui_1465 -0.6 -2.2 hypothetical protein compare
Dsui_1266 -0.6 -1.4 transcriptional regulator NrdR compare
Dsui_3067 -0.6 -1.4 small protein A (tmRNA-binding) compare
Dsui_2717 -0.6 -1.1 RNA polymerase-binding protein DksA compare
Dsui_0811 -0.6 -2.4 hypothetical protein compare
Dsui_3532 -0.6 -1.6 Protein of unknown function (DUF3106) compare
Dsui_2921 -0.6 -1.1 isochorismate synthase family protein compare
Dsui_2402 -0.6 -0.6 hypothetical protein compare
Dsui_3081 -0.6 -0.7 chaperone protein DnaK compare
Dsui_2641 -0.6 -2.4 putative multicopper oxidase compare
Dsui_3531 -0.5 -1.2 Protein of unknown function (DUF3619) compare
Dsui_0245 -0.5 -1.6 S-adenosyl-methyltransferase MraW compare
Dsui_0810 -0.5 -2.7 signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation compare
Dsui_1579 -0.5 -2.7 ABC-type branched-chain amino acid transport system, periplasmic component compare
Dsui_2563 -0.5 -1.4 hypothetical protein compare
Dsui_0998 -0.5 -1.5 A/G-specific adenine glycosylase compare
Dsui_0656 -0.5 -3.6 chemotaxis protein histidine kinase-like protein compare
Dsui_2609 -0.5 -1.3 hypothetical protein compare
Dsui_1831 -0.5 -2.3 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component compare
Dsui_1356 -0.5 -0.7 hypothetical protein compare
Dsui_3239 -0.5 -4.1 acetyl-CoA acetyltransferase compare
Dsui_0258 -0.5 -2.0 sulfate ABC transporter, ATP-binding protein compare
Dsui_0860 -0.5 -2.2 hypothetical protein compare
Dsui_2466 -0.5 -1.2 ATP dependent DNA ligase-like protein compare
Dsui_2900 -0.5 -2.4 glutamate synthase family protein compare
Dsui_2842 -0.5 -2.4 radical SAM pair-associated protein compare
Dsui_1566 -0.5 -1.9 inositol monophosphatase/fructose-1,6-bisphosphatase family protein compare
Dsui_2172 -0.5 -0.8 transcriptional regulator compare
Dsui_2305 -0.5 -2.7 electron transfer flavoprotein, beta subunit compare
Dsui_2608 -0.5 -2.6 topoisomerase IA compare
Dsui_0675 -0.5 -1.0 putative dithiol-disulfide isomerase involved in polyketide biosynthesis compare
Dsui_2593 -0.5 -2.5 PilS N terminal protein compare
Dsui_0657 -0.5 -3.1 methyl-accepting chemotaxis protein compare
Dsui_2951 -0.5 -1.9 putative iron-regulated membrane protein compare
Dsui_2908 -0.5 -2.0 aspartate/tyrosine/aromatic aminotransferase compare
Dsui_2151 -0.5 -1.3 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
Dsui_0734 -0.5 -0.9 acetyltransferase compare
Dsui_0505 -0.5 -3.1 7-cyano-7-deazaguanine reductase compare
Dsui_1525 -0.5 -2.9 sulfate/thiosulfate-binding protein compare
Dsui_1840 -0.5 -1.6 hypothetical protein compare
Dsui_2123 -0.5 -0.9 EAL domain-containing protein compare
Dsui_2703 -0.5 -1.4 chromosome segregation protein SMC compare
Dsui_3414 -0.5 -2.4 FAD/FMN-dependent dehydrogenase compare
Dsui_2694 -0.5 -1.0 ribosomal protein S2 compare
Dsui_0175 -0.5 -0.9 hypothetical protein compare
Dsui_2555 -0.5 -0.7 Bacteriophage coat protein B compare
Dsui_1796 -0.5 -3.0 phage/plasmid-related protein TIGR03299 compare
Dsui_1582 -0.5 -2.3 Fe-S oxidoreductase compare
Dsui_0846 -0.5 -2.2 glucose-inhibited division protein A compare
Dsui_2902 -0.5 -0.6 hypothetical protein compare
Dsui_1391 -0.5 -1.0 hypothetical protein compare
Dsui_2594 -0.5 -2.1 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Dsui_2436 -0.5 -1.8 ribonuclease, Rne/Rng family compare
Dsui_2887 -0.5 -1.8 hypothetical protein compare
Dsui_0660 -0.5 -2.4 response regulator with CheY-like receiver domain and winged-helix DNA-binding domain compare
Dsui_2846 -0.5 -2.9 ATPase compare
Dsui_1227 -0.5 -1.5 DNA/RNA helicase, superfamily I compare
Dsui_1235 -0.5 -1.0 hypothetical protein compare
Dsui_1175 -0.5 -1.3 cytochrome c-type biogenesis protein CcmI compare
Dsui_2878 -0.5 -2.0 ABC-type antimicrobial peptide transport system, permease component compare
Dsui_0704 -0.5 -2.7 RNA polymerase sigma-54 factor compare
Dsui_2265 -0.5 -1.1 DNA-directed DNA polymerase III PolC compare
Dsui_1351 -0.5 -1.7 DNA/RNA helicase, superfamily II compare
Dsui_2033 -0.4 -1.8 transcriptional regulator compare
Dsui_2945 -0.4 -1.5 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sodium Chlorite in Dechlorosoma suillum PS

For stress Sodium Chlorite across organisms