Experiment set19S244 for Sinorhizobium meliloti 1021

Compare to:

LB with 3-octanone 2.655166667 mM

200 most important genes:

  gene name fitness t score description  
SMc02767 -5.1 -7.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00236 -4.9 -3.3 Indole-3-glycerol phosphate synthase compare
SMc00235 -4.7 -3.3 anthranilate phosphoribosyltransferase compare
SMa1635 -4.5 -2.1 hypothetical protein compare
SMc02725 -4.5 -11.5 anthranilate synthase compare
SMc02766 -4.3 -13.2 tryptophan synthase subunit beta compare
SMc02765 -3.8 -10.0 tryptophan synthase subunit alpha compare
SMc01242 -3.8 -3.4 signal peptide protein compare
SMa0846 -2.9 -1.3 transposase, fragment compare
SMc01207 -2.8 -2.7 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc01800 -2.6 -1.6 cytochrome C oxidase assembly transmembrane protein compare
SMc02897 -2.4 -2.3 cytochrome C transmembrane protein compare
SMc00013 -2.4 -2.7 cytochrome C oxidase subunit III transmembrane protein compare
SMc03069 -2.3 -2.2 6-phosphogluconolactonase compare
SMc02107 -2.3 -1.5 hypothetical protein compare
SMc03900 -2.3 -7.7 cyclic beta-1,2-glucan ABc transporter compare
SMc03935 -2.2 -4.9 hypothetical protein compare
SMc02245 -2.1 -1.5 dihydroorotate dehydrogenase 2 compare
SMc03763 -2.1 -1.4 cytosine-specific methyltransferase compare
SMc02906 -2.1 -0.9 hypothetical protein compare
SMc04005 -1.9 -7.0 pyruvate kinase compare
SMc04245 -1.9 -8.7 high-affinity zinc uptake system ABC transporter protein compare
SMa0144 -1.9 -1.5 hypothetical protein compare
SMc04243 -1.8 -4.0 high-affinity zinc uptake system membrane ABC transporter protein compare
SM_b20897 -1.8 -1.9 hypothetical protein compare
SMc03930 -1.8 -1.6 sarcosine oxidase subunit gamma compare
SMc00963 -1.8 -1.2 hypothetical protein compare
SMc00505 -1.7 -2.6 hypothetical protein compare
SMc03184 -1.7 -1.0 PH adaptation potassium efflux system G transmembrane protein compare
SMc04001 -1.7 -1.3 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc00876 -1.7 -3.4 ATP-binding MRP protein compare
SMc02362 -1.7 -1.6 cytochrome c-type biogenesis protein CcmE compare
SMc00053 -1.7 -1.1 monovalent cation/H+ antiporter subunit C compare
SMc00760 -1.7 -3.1 recombinase A compare
SMc04085 -1.7 -2.0 hypothetical protein compare
SMa1099 -1.7 -2.4 CycB1 cytochrome c-552 precursor compare
SM_b22001 -1.7 -1.9 hypothetical protein compare
SMc00427 -1.6 -1.9 peptide chain release factor RF-3 protein compare
SMc02077 -1.6 -2.0 exodeoxyribonuclease III protein compare
SMc02114 -1.6 -1.8 hypothetical protein compare
SM_b21633 -1.6 -1.7 enoyl-CoA hydratase compare
SMc00982 -1.6 -2.1 dioxygenase compare
SMc03795 -1.6 -1.7 isopropylmalate isomerase small subunit compare
SMc03967 -1.5 -1.0 Holliday junction resolvase compare
SMc03070 -1.5 -2.3 glucose-6-phosphate 1-dehydrogenase compare
SMc03050 -1.5 -2.2 flagellar biosynthesis regulatory protein FlaF compare
SM_b21454 -1.5 -1.5 hypothetical protein compare
SMc03181 -1.5 -6.5 monovalent cation/H+ antiporter subunit D compare
SMc00458 -1.5 -6.7 transcriptional regulator compare
SMc03850 -1.4 -0.8 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc00514 -1.4 -2.1 monooxygenase compare
SMa0771 -1.4 -1.4 hypothetical protein compare
SMc03863 -1.4 -2.0 50S ribosomal protein L19 compare
SMc00349 -1.4 -4.5 GTP-binding protein LepA compare
SMc01850 -1.4 -1.3 hypothetical protein compare
SM_b21551 -1.4 -1.5 hypothetical protein compare
SMc00189 -1.4 -3.4 cytochrome C1 protein compare
SMc03127 -1.4 -1.8 ABC transporter permease compare
SMc02055 -1.4 -1.3 phytoene synthase compare
SMc03183 -1.4 -5.2 monovalent cation/H+ antiporter subunit F compare
SMc02234 -1.4 -1.3 hypothetical protein compare
SMc02850 -1.3 -2.2 DNA polymerase I compare
SMc02695 -1.3 -3.0 GTP-dependent nucleic acid-binding protein EngD compare
SMc04385 -1.3 -3.4 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc00419 -1.3 -2.1 glutathione synthetase compare
SMc00619 -1.3 -1.2 hypothetical protein compare
SMa1170 -1.3 -2.7 hypothetical protein compare
SMa0674 -1.3 -1.1 hypothetical protein compare
SMc02985 -1.3 -0.9 hypothetical protein compare
SMc00450 -1.3 -0.8 protoheme IX farnesyltransferase compare
SMc04244 -1.3 -2.7 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMc00981 -1.3 -2.8 ferredoxin protein compare
SMc00329 -1.3 -2.0 iron response regulator protein compare
SMc02983 -1.3 -3.3 ornithine, DAP, or arginine decarboxylase compare
SMc00412 -1.3 -0.8 orotidine 5'-phosphate decarboxylase compare
SMc02647 -1.2 -1.1 transcriptional regulator compare
SMc01124 -1.2 -5.6 PII uridylyl-transferase compare
SMc03180 -1.2 -3.4 monovalent cation/H+ antiporter subunit C compare
SMc02484 -1.2 -3.4 amino acid efflux transmembrane protein compare
SMc01769 -1.2 -6.1 hypothetical protein compare
SMc02149 -1.2 -1.8 hypothetical protein compare
SMc02165 -1.2 -1.1 orotate phosphoribosyltransferase compare
SMc00012 -1.2 -1.7 cytochrome C oxidase assembly protein compare
SMc00029 -1.2 -1.6 hypothetical protein compare
SMc03182 -1.2 -3.6 pH adaptation potassium efflux system E transmembrane protein compare
SMc04221 -1.2 -2.0 hypothetical protein compare
SM_b21177 -1.2 -4.1 phosphate uptake ABC transporter ATP-binding protein compare
SMc02659 -1.2 -2.4 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc02833 -1.1 -1.1 penicillin-insensitive murein endopeptidase compare
SMc02799 -1.1 -1.3 16S rRNA methyltransferase GidB compare
SMa1239 -1.1 -1.5 NapD component of periplasmic nitrate reductase compare
SMc04242 -1.1 -0.9 zinc uptake regulation protein compare
SMa0326 -1.1 -1.9 short chain alcohol dehydrogenase-related dehydrogenase compare
SMa1367 -1.1 -1.3 short chain alcohol dehydrogenase-related dehydrogenase compare
SM_b21175 -1.1 -2.4 phosphate uptake ABC transporter permease compare
SMc00188 -1.1 -3.8 cytochrome B transmembrane protein compare
SMc02861 -1.1 -2.1 phosphate transporter compare
SMc03229 -1.1 -0.9 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMc03878 -1.1 -2.2 acetoacetyl-CoA reductase compare
SMc00175 -1.0 -3.4 ABC transporter ATP-binding protein compare
SM_b20105 -1.0 -0.9 transcriptional regulator compare
SMc03179 -1.0 -5.8 monovalent cation/H+ antiporter subunit A compare
SM_b20810 -1.0 -3.8 membrane-located cell surface saccharide acetylase compare
SMc00576 -1.0 -2.0 hypothetical protein compare
SMc02901 -1.0 -1.1 hypothetical protein compare
SMc00838 -1.0 -3.2 hypothetical protein compare
SMc01595 -1.0 -0.9 sensor histidine kinase transmembrane protein compare
SMc04382 -1.0 -8.2 beta-(1,2)-glucan production associated transmembrane protein compare
SM_b20725 -1.0 -1.8 hypothetical protein compare
SMc00293 -1.0 -3.7 homoserine dehydrogenase compare
SMa0757 -1.0 -3.0 NodD2 nod box-dependent transcription activator compare
SMc02166 -1.0 -2.6 dihydroorotase compare
SMc04266 -1.0 -2.0 hypothetical protein compare
SMa1921 -1.0 -1.0 hypothetical protein compare
SMc01765 -1.0 -0.7 hypothetical protein compare
SMc03157 -1.0 -4.6 outer membrane lipoprotein transmembrane compare
SMc03800 -1.0 -2.7 hypothetical protein compare
SMc00565 -1.0 -1.5 50S ribosomal protein L9 compare
SMa0734 -0.9 -1.2 hypothetical protein compare
SMc03046 -0.9 -3.2 transcriptional regulator compare
SMa0848 -0.9 -2.0 hypothetical protein compare
SMc04174 -0.9 -1.5 signal peptide protein compare
SMc01206 -0.9 -0.6 queuine tRNA-ribosyltransferase compare
SMc03158 -0.9 -2.2 ABC transporter permease compare
SMc00554 -0.9 -3.9 amidophosphoribosyltransferase compare
SMc00711 -0.9 -3.4 cyclohexadienyl dehydrogenase compare
SMc02050 -0.9 -1.5 trigger factor compare
SM_b21176 -0.9 -2.3 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc00580 -0.9 -1.4 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc02497 -0.9 -2.5 hypothetical protein compare
SMc01877 -0.9 -2.5 DNA repair protein compare
SMc00187 -0.9 -2.3 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc01347 -0.9 -1.0 hypothetical protein compare
SMc00010 -0.9 -1.0 cytochrome C oxidase polypeptide I transmembrane protein compare
SMa1160 -0.9 -2.5 hypothetical protein compare
SMc00614 -0.9 -3.6 phosphoribosylglycinamide formyltransferase compare
SMc02520 -0.9 -1.0 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc04441 -0.8 -1.4 hypothetical protein compare
SMc01431 -0.8 -5.6 acetolactate synthase 3 catalytic subunit compare
SMc01099 -0.8 -1.4 tRNA pseudouridine synthase A compare
SMc02908 -0.8 -3.0 recombination protein RecR compare
SMa0520 -0.8 -1.7 RpiR family transcriptional regulator compare
SM_b20260 -0.8 -2.1 hypothetical protein compare
SMc00522 -0.8 -5.1 ATP-dependent RNA helicase compare
SMc00352 -0.8 -1.4 acetyltransferase compare
SMc02714 -0.8 -0.8 hypothetical protein compare
SMc03091 -0.8 -2.2 arginase compare
SMc02561 -0.8 -1.3 hypothetical protein compare
SM_b20148 -0.8 -2.0 transcriptional regulator compare
SMc01342 -0.8 -1.8 hypothetical protein compare
SMc04088 -0.8 -4.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc04346 -0.8 -3.0 ketol-acid reductoisomerase compare
SMc01440 -0.8 -1.5 hydrolase serine protease transmembrane protein compare
SMc00914 -0.8 -1.4 oxidoreductase compare
SMc01468 -0.8 -1.7 chemotaxis protein compare
SMc04866 -0.8 -1.3 hypothetical protein compare
SMc01360 -0.8 -0.5 aspartate carbamoyltransferase catalytic subunit compare
SMc02266 -0.8 -0.6 hypothetical protein compare
SMc02474 -0.8 -2.3 ABC transporter ATP-binding protein compare
SMc02425 -0.8 -1.6 transcriptional regulator compare
SMa0663 -0.8 -1.6 hypothetical protein compare
SMc02941 -0.8 -1.9 hypothetical protein compare
SMa0964 -0.8 -1.3 hypothetical protein compare
SMc02504 -0.7 -2.8 transcriptional regulator compare
SMc02755 -0.7 -3.0 S-adenosyl-L-homocysteine hydrolase compare
SMc00072 -0.7 -0.9 peroxiredoxin protein compare
SMc01112 -0.7 -2.3 hypothetical protein conserved
SMc03159 -0.7 -1.5 ABC transporter ATP-binding protein compare
SM_b20955 -0.7 -1.4 endo-beta-1,3-1,4-glycanase compare
SM_b21181 -0.7 -2.7 glutaryl-CoA dehydrogenase compare
SMc04384 -0.7 -3.8 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
SMc01858 -0.7 -0.9 S-adenosyl-methyltransferase MraW compare
SMc02697 -0.7 -1.0 hypothetical protein compare
SMc02503 -0.7 -2.7 hypothetical protein compare
SMc01007 -0.7 -1.1 hypothetical protein compare
SMc00493 -0.7 -2.1 phosphoribosylformylglycinamidine synthase I compare
SMa2289 -0.7 -0.9 hypothetical protein compare
SMc02856 -0.7 -3.9 penicillin-binding protein compare
SMa1697 -0.7 -0.6 hypothetical protein compare
SMc02863 -0.7 -1.6 recombination protein F compare
SMc00073 -0.7 -1.1 hypothetical protein compare
SM_b20811 -0.7 -1.1 hypothetical protein compare
SMa0431 -0.7 -0.8 hypothetical protein compare
SMc04454 -0.7 -2.3 ABC transporter ATP-binding protein compare
SMc00712 -0.7 -1.0 hypothetical protein compare
SMc00320 -0.7 -3.2 ribosome-binding factor A compare
SMc02361 -0.7 -2.0 cytochrome C-type biogenesis transmembrane protein compare
SMc02827 -0.7 -1.9 hypothetical protein compare
SMc00494 -0.7 -1.2 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc00045 -0.7 -1.6 cytochrome C signal peptide protein compare
SMc00088 -0.7 -1.1 hypothetical protein compare
SM_b20884 -0.7 -1.8 hypothetical protein compare
SMa1779 -0.7 -1.0 hypothetical protein compare
SMc01608 -0.7 -2.5 ABC transporter ATP-binding protein compare
SMa1643 -0.7 -1.6 hypothetical protein compare
SMa1111 -0.7 -2.1 hypothetical protein compare
SM_b20773 -0.7 -2.2 GntR family transcriptional regulator compare
SMc01553 -0.7 -1.7 acyl carrier protein compare
SMc03996 -0.7 -1.9 thiamine-phosphate pyrophosphorylase compare
SMc00495 -0.7 -1.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in stress experiments

For stress 3-octanone across organisms