Experiment set19S243 for Sinorhizobium meliloti 1021

Compare to:

LB with 3-octanone 2.655166667 mM

200 most important genes:

  gene name fitness t score description  
SMc02766 -5.3 -14.6 tryptophan synthase subunit beta compare
SMc00236 -5.0 -3.4 Indole-3-glycerol phosphate synthase compare
SMc02767 -4.6 -8.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02725 -4.3 -12.6 anthranilate synthase compare
SMc02765 -4.0 -10.3 tryptophan synthase subunit alpha compare
SMc00235 -3.7 -5.1 anthranilate phosphoribosyltransferase compare
SMc00053 -3.4 -1.5 monovalent cation/H+ antiporter subunit C compare
SMc02897 -3.2 -2.2 cytochrome C transmembrane protein compare
SMa1635 -3.0 -1.9 hypothetical protein compare
SM_b20897 -3.0 -2.6 hypothetical protein compare
SMc03935 -2.7 -5.0 hypothetical protein compare
SMa0740 -2.5 -1.6 hypothetical protein compare
SMc00981 -2.5 -3.8 ferredoxin protein compare
SMc02245 -2.3 -1.5 dihydroorotate dehydrogenase 2 compare
SMc03763 -2.2 -1.5 cytosine-specific methyltransferase compare
SMc04244 -2.2 -4.2 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMc03900 -2.2 -8.4 cyclic beta-1,2-glucan ABc transporter compare
SMc02906 -2.2 -0.9 hypothetical protein compare
SMc00982 -2.1 -2.4 dioxygenase compare
SMc03069 -2.1 -2.4 6-phosphogluconolactonase compare
SMa0851 -1.9 -2.6 NodH sulfotransferase compare
SMc04005 -1.9 -7.6 pyruvate kinase compare
SMc02647 -1.9 -1.4 transcriptional regulator compare
SMc03863 -1.9 -2.3 50S ribosomal protein L19 compare
SMc03158 -1.9 -3.4 ABC transporter permease compare
SMc00514 -1.9 -3.4 monooxygenase compare
SMc00963 -1.8 -1.2 hypothetical protein compare
SMc00013 -1.8 -2.4 cytochrome C oxidase subunit III transmembrane protein compare
SMa1639 -1.8 -0.8 hypothetical protein compare
SMc01769 -1.7 -8.4 hypothetical protein compare
SMc02266 -1.7 -1.0 hypothetical protein compare
SMc04243 -1.7 -3.9 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc02435 -1.6 -1.5 methyltransferase compare
SMc03967 -1.6 -1.0 Holliday junction resolvase compare
SMa0995 -1.6 -2.6 TRm5 transposase compare
SMc02077 -1.6 -1.9 exodeoxyribonuclease III protein compare
SMc00012 -1.6 -1.6 cytochrome C oxidase assembly protein compare
SMc01800 -1.6 -1.1 cytochrome C oxidase assembly transmembrane protein compare
SMc04245 -1.6 -6.1 high-affinity zinc uptake system ABC transporter protein compare
SMc03182 -1.5 -4.7 pH adaptation potassium efflux system E transmembrane protein compare
SMc04296 -1.5 -0.8 cell division protein FtsZ compare
SMc00914 -1.5 -2.3 oxidoreductase compare
SMc04385 -1.5 -4.4 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc03996 -1.5 -3.8 thiamine-phosphate pyrophosphorylase compare
SMc03850 -1.5 -0.8 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc04246 -1.5 -2.4 transmembrane signal peptide protein compare
SMc02234 -1.5 -1.4 hypothetical protein compare
SMa1223 -1.5 -3.0 hypothetical protein compare
SMc00821 -1.5 -0.8 hypothetical protein compare
SMc04085 -1.5 -2.2 hypothetical protein compare
SMc01595 -1.5 -1.7 sensor histidine kinase transmembrane protein compare
SMc02697 -1.5 -1.8 hypothetical protein compare
SMc00419 -1.4 -2.5 glutathione synthetase compare
SMc01208 -1.4 -1.3 peptidyl-prolyl cis-trans isomerase B protein compare
SMc00349 -1.4 -4.5 GTP-binding protein LepA compare
SM_b21175 -1.4 -2.8 phosphate uptake ABC transporter permease compare
SM_b20810 -1.4 -4.8 membrane-located cell surface saccharide acetylase compare
SMc00241 -1.4 -2.4 transcriptional regulator compare
SMc00010 -1.4 -1.4 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc00353 -1.4 -2.2 transmembrane protein compare
SMc03183 -1.4 -5.8 monovalent cation/H+ antiporter subunit F compare
SMc02985 -1.4 -0.9 hypothetical protein compare
SMc03180 -1.4 -5.0 monovalent cation/H+ antiporter subunit C compare
SMc00293 -1.4 -5.2 homoserine dehydrogenase compare
SMc00189 -1.3 -3.8 cytochrome C1 protein compare
SM_b20948 -1.3 -0.7 glucosyltransferase compare
SMc04327 -1.3 -0.8 hypothetical protein compare
SMc02983 -1.3 -3.8 ornithine, DAP, or arginine decarboxylase compare
SMc02050 -1.3 -1.9 trigger factor compare
SMc02850 -1.3 -2.1 DNA polymerase I compare
SMc01147 -1.3 -1.7 coproporphyrinogen III oxidase compare
SM_b20105 -1.3 -1.4 transcriptional regulator compare
SMc03050 -1.3 -2.3 flagellar biosynthesis regulatory protein FlaF compare
SMc02659 -1.3 -3.9 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMa0789 -1.2 -1.4 GntR family transcriptional regulator compare
SMc01877 -1.2 -3.6 DNA repair protein compare
SMc01124 -1.2 -5.8 PII uridylyl-transferase compare
SMc00458 -1.2 -6.2 transcriptional regulator compare
SMa1174 -1.2 -1.3 hypothetical protein compare
SMc00188 -1.2 -4.3 cytochrome B transmembrane protein compare
SM_b20882 -1.2 -1.7 hypothetical protein compare
SMc03046 -1.2 -3.9 transcriptional regulator compare
SMc00760 -1.2 -2.2 recombinase A compare
SMc00412 -1.2 -1.1 orotidine 5'-phosphate decarboxylase compare
SMc03179 -1.1 -7.0 monovalent cation/H+ antiporter subunit A compare
SMc02361 -1.1 -3.4 cytochrome C-type biogenesis transmembrane protein compare
SMc02561 -1.1 -1.3 hypothetical protein compare
SMc03181 -1.1 -5.1 monovalent cation/H+ antiporter subunit D compare
SM_b21633 -1.1 -1.4 enoyl-CoA hydratase compare
SMc01471 -1.1 -2.0 cytochrome C oxidase assembly factor transmembrane protein compare
SMc01007 -1.1 -1.6 hypothetical protein compare
SMc02695 -1.1 -2.7 GTP-dependent nucleic acid-binding protein EngD compare
SMc00554 -1.1 -4.6 amidophosphoribosyltransferase compare
SMc02166 -1.1 -2.9 dihydroorotase compare
SMc02055 -1.1 -1.2 phytoene synthase compare
SMc04382 -1.1 -8.9 beta-(1,2)-glucan production associated transmembrane protein compare
SMc02639 -1.1 -1.7 transcriptional regulator compare
SM_b21174 -1.1 -3.5 phosphate uptake ABC transporter permease compare
SMc00876 -1.1 -2.7 ATP-binding MRP protein compare
SMa0758 -1.1 -1.7 hypothetical protein compare
SMc03834 -1.1 -1.2 pterin-4-alpha-carbinolamine dehydratase compare
SMc03070 -1.1 -2.1 glucose-6-phosphate 1-dehydrogenase compare
SMc01472 -1.1 -1.0 50S ribosomal protein L11 methyltransferase compare
SMc02165 -1.0 -1.5 orotate phosphoribosyltransferase compare
SM_b20711 -1.0 -1.6 hypothetical protein compare
SMc02755 -1.0 -2.9 S-adenosyl-L-homocysteine hydrolase compare
SMc00556 -1.0 -2.9 DNA repair protein RadA compare
SMc00143 -1.0 -1.6 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
SMc00427 -1.0 -1.5 peptide chain release factor RF-3 protein compare
SMc04441 -1.0 -1.8 hypothetical protein compare
SMc00187 -1.0 -2.6 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc00711 -1.0 -2.8 cyclohexadienyl dehydrogenase compare
SM_b20994 -1.0 -2.3 hypothetical protein compare
SMc04383 -0.9 -2.7 putative hydrolase, required for lysine catabolism (from data) compare
SMc01461 -0.9 -3.2 DNA helicase II protein compare
SMc02115 -0.9 -0.4 hypothetical protein compare
SMc02505 -0.9 -1.3 hypothetical protein compare
SMa1099 -0.9 -1.7 CycB1 cytochrome c-552 precursor compare
SMc02238 -0.9 -0.8 hypothetical protein compare
SMc00555 -0.9 -1.1 colicin V production transmembrane protein compare
SMc01850 -0.9 -1.0 hypothetical protein compare
SMa0431 -0.9 -1.0 hypothetical protein compare
SMc02504 -0.9 -4.0 transcriptional regulator compare
SMa1921 -0.9 -1.0 hypothetical protein compare
SMc02615 -0.9 -2.0 signal peptide protein compare
SMa0052 -0.9 -2.4 hypothetical protein compare
SMc02058 -0.9 -1.1 YAJC protein compare
SMc02149 -0.9 -1.2 hypothetical protein compare
SMc02503 -0.9 -4.9 hypothetical protein compare
SMc03157 -0.9 -4.4 outer membrane lipoprotein transmembrane compare
SMc00176 -0.9 -3.3 hypothetical protein compare
SM_b21007 -0.9 -2.3 hypothetical protein compare
SMc01441 -0.8 -1.7 membrane bound protease compare
SMc00838 -0.8 -2.9 hypothetical protein compare
SMc01723 -0.8 -1.3 hypothetical protein compare
SM_b20143 -0.8 -1.0 oligopeptide ABC transporter permease compare
SMc01360 -0.8 -0.5 aspartate carbamoyltransferase catalytic subunit compare
SM_b22023 -0.8 -0.8 molecular chaperone GroES compare
SMc01207 -0.8 -1.4 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc00174 -0.8 -3.8 hypothetical protein compare
SMc00494 -0.8 -1.4 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMa1570 -0.8 -1.3 PilA2 pilus assembly protein compare
SMa0750 -0.8 -2.2 LysR family transcriptional regulator compare
SMc00495 -0.8 -2.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00853 -0.8 -1.4 hypothetical protein compare
SMc02141 -0.8 -0.9 phosphate transporter PhoU compare
SMc01431 -0.8 -5.2 acetolactate synthase 3 catalytic subunit compare
SMc04456 -0.8 -2.6 chaperone protein compare
SMc02280 -0.8 -1.1 hypothetical protein compare
SMc00622 -0.8 -3.4 ribonuclease D protein compare
SMc03312 -0.8 -1.2 transposase ISRM11/ISRM2011-2 compare
SM_b20474 -0.8 -1.5 hypothetical protein compare
SMa0520 -0.8 -2.1 RpiR family transcriptional regulator compare
SMc02799 -0.7 -1.0 16S rRNA methyltransferase GidB compare
SMc02362 -0.7 -1.0 cytochrome c-type biogenesis protein CcmE compare
SMc02856 -0.7 -3.5 penicillin-binding protein compare
SM_b20803 -0.7 -1.5 3-deoxy-manno-octulosonate cytidylyltransferase compare
SMa0545 -0.7 -1.7 hypothetical protein compare
SMa0846 -0.7 -0.5 transposase, fragment compare
SMa1960 -0.7 -2.1 hypothetical protein compare
SMc01930 -0.7 -1.3 hypothetical protein compare
SMc00352 -0.7 -1.0 acetyltransferase compare
SMc02112 -0.7 -2.9 hypothetical protein compare
SMa1595 -0.7 -2.2 hypothetical protein compare
SMc00854 -0.7 -1.0 hypothetical protein compare
SMa1466 -0.7 -2.0 ABC transporter ATP-binding protein compare
SMc01220 -0.7 -1.5 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc00576 -0.7 -1.6 hypothetical protein compare
SMc02232 -0.7 -0.7 hypothetical protein compare
SMc04384 -0.7 -3.4 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
SMc04003 -0.7 -0.9 50S ribosomal protein L36 compare
SMc01112 -0.7 -2.6 hypothetical protein conserved
SMc02558 -0.7 -2.1 hypothetical protein compare
SM_b20359 -0.7 -2.0 hypothetical protein compare
SMc04221 -0.7 -1.3 hypothetical protein compare
SMc00073 -0.7 -1.0 hypothetical protein compare
SMa1176 -0.7 -1.3 hypothetical protein compare
SMc01242 -0.7 -1.5 signal peptide protein compare
SMc02886 -0.7 -1.7 signal peptide protein compare
SMc04453 -0.7 -0.5 hypothetical protein compare
SM_b21046 -0.7 -2.1 transposase of insertion sequence ISRm10-1, orfB C-terminus protein compare
SMa0757 -0.7 -1.8 NodD2 nod box-dependent transcription activator compare
SMc02143 -0.7 -1.8 phosphate ABC transporter permease compare
SMc00726 -0.7 -0.7 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc00823 -0.7 -1.2 hypothetical protein compare
SMc02497 -0.7 -2.0 hypothetical protein compare
SMc02908 -0.7 -2.7 recombination protein RecR compare
SMc02425 -0.7 -1.5 transcriptional regulator compare
SMa0797 -0.7 -1.6 hypothetical protein compare
SMc00488 -0.7 -4.8 phosphoribosylformylglycinamidine synthase II compare
SMc01280 -0.7 -1.3 protease compare
SMc00088 -0.7 -1.0 hypothetical protein compare
SMc04088 -0.7 -3.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc01826 -0.6 -1.4 ABC transporter permease compare
SMc00085 -0.6 -2.8 cytochrome oxidase complex biogenesis factor transmembrane protein compare
SMc00709 -0.6 -2.0 hypothetical protein compare
SMc01858 -0.6 -0.8 S-adenosyl-methyltransferase MraW compare
SMc00614 -0.6 -2.9 phosphoribosylglycinamide formyltransferase compare
SMc00522 -0.6 -3.7 ATP-dependent RNA helicase compare
SMc02071 -0.6 -1.7 hydrolase glycosidase compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in stress experiments

For stress 3-octanone across organisms