Experiment set19S241 for Sinorhizobium meliloti 1021

Compare to:

LB with 3-octanone 2.655166667 mM

200 most important genes:

  gene name fitness t score description  
SMc02767 -5.1 -9.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02766 -5.0 -15.7 tryptophan synthase subunit beta compare
SMc02725 -4.9 -12.2 anthranilate synthase compare
SMc00235 -4.6 -4.5 anthranilate phosphoribosyltransferase compare
SMc02765 -4.6 -11.9 tryptophan synthase subunit alpha compare
SMc00236 -4.3 -4.1 Indole-3-glycerol phosphate synthase compare
SMa1635 -3.1 -2.0 hypothetical protein compare
SMc03935 -2.9 -5.8 hypothetical protein compare
SMc03900 -2.7 -9.2 cyclic beta-1,2-glucan ABc transporter compare
SMc03763 -2.4 -1.6 cytosine-specific methyltransferase compare
SMc00982 -2.4 -2.3 dioxygenase compare
SMa1921 -2.3 -2.7 hypothetical protein compare
SMc04243 -2.3 -5.1 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc03069 -2.2 -2.6 6-phosphogluconolactonase compare
SMc04005 -2.2 -6.7 pyruvate kinase compare
SMc00914 -2.2 -2.9 oxidoreductase compare
SMc01595 -2.0 -1.4 sensor histidine kinase transmembrane protein compare
SMc01939 -2.0 -1.8 urease subunit beta compare
SMc00963 -1.9 -1.3 hypothetical protein compare
SMc02245 -1.9 -1.8 dihydroorotate dehydrogenase 2 compare
SMc00010 -1.8 -1.7 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc03967 -1.7 -1.1 Holliday junction resolvase compare
SMc02435 -1.7 -1.6 methyltransferase compare
SMc00349 -1.7 -5.7 GTP-binding protein LepA compare
SMc02695 -1.7 -3.7 GTP-dependent nucleic acid-binding protein EngD compare
SMc01091 -1.7 -2.5 hypothetical protein compare
SMc04245 -1.7 -7.6 high-affinity zinc uptake system ABC transporter protein compare
SMc03863 -1.6 -2.4 50S ribosomal protein L19 compare
SMc04244 -1.6 -3.9 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMc03159 -1.6 -2.9 ABC transporter ATP-binding protein compare
SMa1073 -1.6 -1.2 TRm23b IS ATP-binding protein compare
SMc04003 -1.6 -1.7 50S ribosomal protein L36 compare
SMc03184 -1.6 -1.9 PH adaptation potassium efflux system G transmembrane protein compare
SMa0846 -1.6 -1.0 transposase, fragment compare
SMc04221 -1.6 -2.7 hypothetical protein compare
SMc00821 -1.5 -0.8 hypothetical protein compare
SMc02050 -1.5 -2.2 trigger factor compare
SMc02985 -1.5 -1.0 hypothetical protein compare
SMc00412 -1.5 -1.0 orotidine 5'-phosphate decarboxylase compare
SMc03181 -1.5 -7.8 monovalent cation/H+ antiporter subunit D compare
SMc03179 -1.5 -8.9 monovalent cation/H+ antiporter subunit A compare
SMc04441 -1.5 -2.7 hypothetical protein compare
SMc00419 -1.5 -2.7 glutathione synthetase compare
SMc03182 -1.5 -4.1 pH adaptation potassium efflux system E transmembrane protein compare
SMc02897 -1.4 -1.9 cytochrome C transmembrane protein compare
SMc01769 -1.4 -7.6 hypothetical protein compare
SMc02107 -1.4 -1.2 hypothetical protein compare
SMc04327 -1.4 -0.9 hypothetical protein compare
SMc02850 -1.4 -2.5 DNA polymerase I compare
SMc01206 -1.4 -1.4 queuine tRNA-ribosyltransferase compare
SMc02149 -1.4 -2.2 hypothetical protein compare
SMc00450 -1.4 -0.9 protoheme IX farnesyltransferase compare
SMc00494 -1.4 -2.1 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc03158 -1.4 -2.4 ABC transporter permease compare
SMc01124 -1.3 -7.7 PII uridylyl-transferase compare
SMc00876 -1.3 -3.3 ATP-binding MRP protein compare
SMc01850 -1.3 -1.5 hypothetical protein compare
SMc01417 -1.3 -2.2 hypothetical protein compare
SMc03180 -1.3 -3.1 monovalent cation/H+ antiporter subunit C compare
SMc00981 -1.3 -3.2 ferredoxin protein compare
SMc02166 -1.3 -3.5 dihydroorotase compare
SMc03157 -1.3 -5.4 outer membrane lipoprotein transmembrane compare
SMc00576 -1.3 -2.6 hypothetical protein compare
SMc00013 -1.3 -1.7 cytochrome C oxidase subunit III transmembrane protein compare
SM_b20810 -1.3 -4.6 membrane-located cell surface saccharide acetylase compare
SMc00189 -1.3 -4.0 cytochrome C1 protein compare
SMc00458 -1.3 -6.7 transcriptional regulator compare
SMc02234 -1.2 -1.4 hypothetical protein compare
SMc01207 -1.2 -2.1 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc02647 -1.2 -1.2 transcriptional regulator compare
SMc01208 -1.2 -1.2 peptidyl-prolyl cis-trans isomerase B protein compare
SMc00580 -1.2 -1.9 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMa0663 -1.2 -2.2 hypothetical protein compare
SMc04002 -1.2 -6.3 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc02520 -1.2 -0.8 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc02055 -1.2 -1.3 phytoene synthase compare
SMc03183 -1.2 -4.1 monovalent cation/H+ antiporter subunit F compare
SMc04088 -1.2 -6.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc01242 -1.2 -2.3 signal peptide protein compare
SMc02141 -1.2 -1.3 phosphate transporter PhoU compare
SMa1101 -1.2 -1.8 hypothetical protein compare
SMc03996 -1.2 -3.3 thiamine-phosphate pyrophosphorylase compare
SMc02659 -1.1 -4.7 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc04382 -1.1 -9.3 beta-(1,2)-glucan production associated transmembrane protein compare
SMc02561 -1.1 -1.8 hypothetical protein compare
SMc01877 -1.1 -4.2 DNA repair protein compare
SMa0736 -1.1 -1.6 hypothetical protein compare
SMc01147 -1.1 -1.6 coproporphyrinogen III oxidase compare
SMc00554 -1.1 -4.8 amidophosphoribosyltransferase compare
SMc00760 -1.1 -2.7 recombinase A compare
SMc00293 -1.1 -3.9 homoserine dehydrogenase compare
SMc01568 -1.1 -1.7 hypothetical protein compare
SMc03127 -1.1 -1.4 ABC transporter permease compare
SMc00712 -1.1 -1.4 hypothetical protein compare
SMc03046 -1.1 -2.9 transcriptional regulator compare
SMc00514 -1.1 -2.0 monooxygenase compare
SMc00427 -1.1 -1.8 peptide chain release factor RF-3 protein compare
SMc02856 -1.0 -6.1 penicillin-binding protein compare
SMa0052 -1.0 -3.0 hypothetical protein compare
SMc02165 -1.0 -1.8 orotate phosphoribosyltransferase compare
SMc03070 -1.0 -2.1 glucose-6-phosphate 1-dehydrogenase compare
SMc01723 -1.0 -1.5 hypothetical protein compare
SMc00993 -1.0 -6.3 phosphoribosylamine--glycine ligase compare
SMc00615 -1.0 -6.3 phosphoribosylaminoimidazole synthetase compare
SMc04385 -1.0 -2.6 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc00495 -1.0 -3.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00029 -1.0 -1.9 hypothetical protein compare
SM_b20955 -1.0 -1.9 endo-beta-1,3-1,4-glycanase compare
SMc00493 -1.0 -3.0 phosphoribosylformylglycinamidine synthase I compare
SMc04454 -1.0 -3.3 ABC transporter ATP-binding protein compare
SMc02434 -0.9 -1.8 hypothetical protein compare
SMa0789 -0.9 -1.3 GntR family transcriptional regulator compare
SMc01765 -0.9 -0.8 hypothetical protein compare
SMc02558 -0.9 -3.3 hypothetical protein compare
SMc04085 -0.9 -2.0 hypothetical protein compare
SMa0740 -0.9 -0.6 hypothetical protein compare
SMc01471 -0.9 -1.9 cytochrome C oxidase assembly factor transmembrane protein compare
SM_b21177 -0.9 -3.6 phosphate uptake ABC transporter ATP-binding protein compare
SMc02361 -0.9 -4.2 cytochrome C-type biogenesis transmembrane protein compare
SMc01093 -0.9 -2.6 esterase compare
SM_b21397 -0.9 -1.3 hypothetical protein compare
SMc00614 -0.9 -3.2 phosphoribosylglycinamide formyltransferase compare
SMc02077 -0.9 -1.9 exodeoxyribonuclease III protein compare
SM_b21679 -0.9 -0.9 hypothetical protein compare
SMc01440 -0.9 -2.1 hydrolase serine protease transmembrane protein compare
SMa1365 -0.9 -0.8 ATP-binding protein compare
SMc01112 -0.9 -3.6 hypothetical protein conserved
SMc02906 -0.9 -0.5 hypothetical protein compare
SMc01360 -0.9 -0.6 aspartate carbamoyltransferase catalytic subunit compare
SMc00556 -0.8 -3.0 DNA repair protein RadA compare
SMa1174 -0.8 -1.1 hypothetical protein compare
SMc03850 -0.8 -0.7 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc00012 -0.8 -1.5 cytochrome C oxidase assembly protein compare
SMc02635 -0.8 -4.4 DNA repair protein RecO compare
SMc00488 -0.8 -5.8 phosphoribosylformylglycinamidine synthase II compare
SMc01431 -0.8 -6.0 acetolactate synthase 3 catalytic subunit compare
SMc02983 -0.8 -3.0 ornithine, DAP, or arginine decarboxylase compare
SMc00187 -0.8 -2.2 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc02362 -0.8 -1.1 cytochrome c-type biogenesis protein CcmE compare
SMc02838 -0.8 -3.7 phosphoglyceromutase compare
SMc00143 -0.8 -1.3 molybdopterin-guanine dinucleotide biosynthesis protein MobA compare
SMc00711 -0.8 -3.4 cyclohexadienyl dehydrogenase compare
SMc04001 -0.8 -0.9 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SM_b21007 -0.8 -2.0 hypothetical protein compare
SMc01929 -0.8 -1.5 hypothetical protein compare
SMa0775 -0.8 -1.7 hypothetical protein compare
SMc01501 -0.8 -0.9 mannitol 2-dehydrogenase compare
SMc03795 -0.8 -1.2 isopropylmalate isomerase small subunit compare
SM_b21174 -0.8 -1.9 phosphate uptake ABC transporter permease compare
SMc02755 -0.8 -2.9 S-adenosyl-L-homocysteine hydrolase compare
SMc00073 -0.8 -1.5 hypothetical protein compare
SM_b21026 -0.8 -2.1 exopeptide compare
SM_b20148 -0.8 -2.0 transcriptional regulator compare
SM_b21100 -0.8 -0.9 polysaccharide deacetylase compare
SMc02143 -0.7 -2.2 phosphate ABC transporter permease compare
SMc00174 -0.7 -3.9 hypothetical protein compare
SM_b20307 -0.7 -0.9 dihydroxyacetone kinase compare
SMc02155 -0.7 -4.8 hypothetical protein compare
SMa0267 -0.7 -2.4 GntR family transcriptional regulator compare
SM_b21633 -0.7 -1.1 enoyl-CoA hydratase compare
SMc01836 -0.7 -0.7 hypothetical protein compare
SMc00176 -0.7 -2.9 hypothetical protein compare
SMa0211 -0.7 -1.1 hypothetical protein compare
SMc02485 -0.7 -1.1 signal peptide protein compare
SMc02114 -0.7 -1.0 hypothetical protein compare
SMc00177 -0.7 -2.8 hypothetical protein compare
SMc00320 -0.7 -4.0 ribosome-binding factor A compare
SM_b21473 -0.7 -1.5 hypothetical protein compare
SMc03979 -0.7 -1.2 glyceraldehyde-3-phosphate dehydrogenase compare
SMa0874 -0.7 -1.1 NodN dehydratase compare
SMc00239 -0.7 -0.8 hypothetical protein compare
SMc01012 -0.7 -0.9 hypothetical protein compare
SMc02757 -0.7 -2.6 hypothetical protein compare
SMa0753 -0.7 -0.4 hypothetical protein compare
SM_b20721 -0.7 -1.3 two-component sensor histidine kinase compare
SM_b21561 -0.7 -3.2 two component response regulator protein compare
SMc00689 -0.7 -2.8 lipoprotein compare
SMc04266 -0.7 -1.1 hypothetical protein compare
SMc00579 -0.7 -1.5 dimethyladenosine transferase compare
SMc00725 -0.7 -1.9 argininosuccinate lyase compare
SMa1413 -0.7 -1.2 hypothetical protein compare
SMc04346 -0.7 -2.4 ketol-acid reductoisomerase compare
SMc02714 -0.7 -0.7 hypothetical protein compare
SMc02863 -0.7 -2.7 recombination protein F compare
SMc00622 -0.6 -2.9 ribonuclease D protein compare
SMc01028 -0.6 -4.8 phosphopyruvate hydratase compare
SMa0190 -0.6 -1.8 transcriptional regulator compare
SMc00355 -0.6 -1.6 hypothetical protein compare
SMc00513 -0.6 -2.7 amino acid-binding periplasmic protein compare
SMc01183 -0.6 -0.7 LexA repressor compare
SMc02908 -0.6 -2.3 recombination protein RecR compare
SMc03981 -0.6 -2.4 phosphoglycerate kinase compare
SMc00298 -0.6 -1.6 methionine aminopeptidase compare
SM_b20994 -0.6 -2.1 hypothetical protein compare
SMc00030 -0.6 -1.9 hypothetical protein compare
SMc02639 -0.6 -1.2 transcriptional regulator compare
SMc00647 -0.6 -2.1 ribosomal large subunit pseudouridine synthase compare
SM_b20655 -0.6 -1.6 hypothetical protein compare
SMc03091 -0.6 -2.0 arginase compare
SMc01800 -0.6 -0.4 cytochrome C oxidase assembly transmembrane protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in stress experiments

For stress 3-octanone across organisms