Experiment set19S240 for Sinorhizobium meliloti 1021

Compare to:

LB with 3-octanone 5.310333333 mM

200 most important genes:

  gene name fitness t score description  
SMa1635 -4.5 -2.0 hypothetical protein compare
SMc02767 -4.3 -8.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02766 -4.2 -14.3 tryptophan synthase subunit beta compare
SMc02765 -4.1 -9.9 tryptophan synthase subunit alpha compare
SMc02107 -4.0 -1.8 hypothetical protein compare
SMc02725 -3.9 -12.1 anthranilate synthase compare
SMc03182 -3.7 -6.1 pH adaptation potassium efflux system E transmembrane protein compare
SMc03181 -3.6 -9.7 monovalent cation/H+ antiporter subunit D compare
SMc03179 -3.5 -12.1 monovalent cation/H+ antiporter subunit A compare
SMa1174 -3.5 -2.3 hypothetical protein compare
SMc01207 -3.4 -2.4 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc02897 -3.2 -2.1 cytochrome C transmembrane protein compare
SMc03183 -3.1 -8.0 monovalent cation/H+ antiporter subunit F compare
SMc00235 -3.1 -5.2 anthranilate phosphoribosyltransferase compare
SMc03180 -2.9 -6.1 monovalent cation/H+ antiporter subunit C compare
SMc03935 -2.9 -4.3 hypothetical protein compare
SMc03100 -2.8 -2.3 hypothetical protein compare
SMc00236 -2.6 -3.5 Indole-3-glycerol phosphate synthase compare
SMc02055 -2.4 -1.6 phytoene synthase compare
SM_b21454 -2.4 -1.8 hypothetical protein compare
SMc03900 -2.3 -7.4 cyclic beta-1,2-glucan ABc transporter compare
SMc03763 -2.2 -1.5 cytosine-specific methyltransferase compare
SMc04085 -2.1 -1.5 hypothetical protein compare
SMc02906 -2.1 -0.9 hypothetical protein compare
SMc00189 -2.1 -5.5 cytochrome C1 protein compare
SMc01765 -2.0 -1.9 hypothetical protein compare
SMc01242 -2.0 -2.7 signal peptide protein compare
SMc04245 -1.9 -8.0 high-affinity zinc uptake system ABC transporter protein compare
SMc00349 -1.9 -5.0 GTP-binding protein LepA compare
SMc04244 -1.9 -3.8 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMc00580 -1.9 -2.7 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc00619 -1.9 -1.3 hypothetical protein compare
SMc01769 -1.8 -8.5 hypothetical protein compare
SMc00963 -1.8 -1.2 hypothetical protein compare
SMc02695 -1.8 -3.5 GTP-dependent nucleic acid-binding protein EngD compare
SMc04005 -1.8 -6.9 pyruvate kinase compare
SMc00013 -1.7 -2.2 cytochrome C oxidase subunit III transmembrane protein compare
SMc00012 -1.7 -2.1 cytochrome C oxidase assembly protein compare
SMc03046 -1.6 -3.8 transcriptional regulator compare
SMc02050 -1.6 -2.1 trigger factor compare
SMc00576 -1.6 -2.5 hypothetical protein compare
SMc01768 -1.6 -3.2 transcriptional regulator compare
SMc04243 -1.6 -3.7 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc00876 -1.5 -3.3 ATP-binding MRP protein compare
SMc01800 -1.5 -1.1 cytochrome C oxidase assembly transmembrane protein compare
SMc03850 -1.5 -0.8 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMa1658 -1.5 -1.3 hypothetical protein compare
SM_b21397 -1.5 -2.1 hypothetical protein compare
SMc01850 -1.4 -1.3 hypothetical protein compare
SMc02234 -1.4 -1.3 hypothetical protein compare
SMc04385 -1.4 -4.0 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc00187 -1.4 -3.2 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc03158 -1.4 -2.4 ABC transporter permease compare
SMc00419 -1.4 -2.2 glutathione synthetase compare
SMc00295 -1.4 -0.8 hypothetical protein compare
SMc01342 -1.4 -2.4 hypothetical protein compare
SMc00353 -1.3 -1.4 transmembrane protein compare
SMc00450 -1.3 -0.9 protoheme IX farnesyltransferase compare
SMc00981 -1.3 -3.0 ferredoxin protein compare
SMc02985 -1.3 -0.9 hypothetical protein compare
SMc02755 -1.3 -3.8 S-adenosyl-L-homocysteine hydrolase compare
SMc00982 -1.3 -2.2 dioxygenase compare
SMc00175 -1.3 -4.6 ABC transporter ATP-binding protein compare
SMc02647 -1.3 -1.1 transcriptional regulator compare
SMa0431 -1.3 -1.2 hypothetical protein compare
SMa0757 -1.3 -3.3 NodD2 nod box-dependent transcription activator compare
SMa1232 -1.2 -3.2 NapC membrane-bound tetraheme cytochrome c subunit compare
SMc03863 -1.2 -1.8 50S ribosomal protein L19 compare
SMc02640 -1.2 -1.2 UDP-glucuronic acid epimerase compare
SMc02238 -1.2 -0.9 hypothetical protein compare
SMc03184 -1.2 -1.4 PH adaptation potassium efflux system G transmembrane protein compare
SMc02983 -1.2 -3.3 ornithine, DAP, or arginine decarboxylase compare
SMc04003 -1.2 -1.3 50S ribosomal protein L36 compare
SMa0995 -1.2 -1.8 TRm5 transposase compare
SMc04330 -1.2 -0.8 trimethylamine methyltransferase compare
SMc04382 -1.2 -9.4 beta-(1,2)-glucan production associated transmembrane protein compare
SMa0964 -1.2 -1.7 hypothetical protein compare
SMc00188 -1.2 -3.9 cytochrome B transmembrane protein compare
SMc04327 -1.2 -0.7 hypothetical protein compare
SMc03153 -1.1 -2.3 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SM_b20810 -1.1 -3.9 membrane-located cell surface saccharide acetylase compare
SMc01441 -1.1 -1.9 membrane bound protease compare
SM_b20474 -1.1 -2.0 hypothetical protein compare
SM_b20105 -1.1 -1.3 transcriptional regulator compare
SMa0663 -1.1 -2.1 hypothetical protein compare
SMc00760 -1.1 -2.4 recombinase A compare
SMc00010 -1.1 -1.2 cytochrome C oxidase polypeptide I transmembrane protein compare
SM_b20563 -1.1 -1.6 hypothetical protein compare
SMc01124 -1.1 -5.1 PII uridylyl-transferase compare
SMa1639 -1.1 -1.2 hypothetical protein compare
SMc02867 -1.1 -2.4 multidrug-efflux system transmembrane protein compare
SMc00404 -1.1 -0.8 hypothetical protein compare
SMc02850 -1.1 -2.0 DNA polymerase I compare
SMc01368 -1.0 -3.1 transport transmembrane protein compare
SMc02863 -1.0 -4.2 recombination protein F compare
SMc01595 -1.0 -0.9 sensor histidine kinase transmembrane protein compare
SMc02362 -1.0 -1.3 cytochrome c-type biogenesis protein CcmE compare
SMc02833 -1.0 -0.9 penicillin-insensitive murein endopeptidase compare
SMc03091 -1.0 -2.7 arginase compare
SMc04441 -1.0 -1.6 hypothetical protein compare
SM_b22005 -1.0 -1.1 hypothetical protein compare
SMc00458 -1.0 -5.1 transcriptional regulator compare
SMc00914 -1.0 -1.7 oxidoreductase compare
SMc00293 -1.0 -4.1 homoserine dehydrogenase compare
SMa1570 -1.0 -1.3 PilA2 pilus assembly protein compare
SMc01208 -1.0 -1.1 peptidyl-prolyl cis-trans isomerase B protein compare
SMa0748 -1.0 -1.3 MucR family transcriptional regulator compare
SMc00053 -1.0 -0.7 monovalent cation/H+ antiporter subunit C compare
SMc02520 -1.0 -0.9 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc02361 -1.0 -3.6 cytochrome C-type biogenesis transmembrane protein compare
SMc01440 -1.0 -2.2 hydrolase serine protease transmembrane protein compare
SMa0520 -1.0 -2.5 RpiR family transcriptional regulator compare
SMc02077 -1.0 -1.5 exodeoxyribonuclease III protein compare
SMc04266 -1.0 -2.2 hypothetical protein compare
SMc04242 -1.0 -1.1 zinc uptake regulation protein compare
SMc00351 -1.0 -0.8 hypothetical protein compare
SMc01089 -1.0 -1.1 hypothetical protein compare
SMc02144 -1.0 -0.9 phosphate ABC transporter permease compare
SMc01877 -0.9 -3.5 DNA repair protein compare
SMc01419 -0.9 -1.4 RNA polymerase sigma factor protein compare
SMc01164 -0.9 -4.1 hypothetical protein compare
SMc02166 -0.9 -2.6 dihydroorotase compare
SMc02115 -0.9 -0.4 hypothetical protein compare
SMc02510 -0.9 -0.5 ferric uptake regulation protein compare
SMc00540 -0.9 -1.9 hypothetical protein compare
SMc04001 -0.9 -0.8 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SM_b20758 -0.9 -1.2 ArsR family transcriptional regulator compare
SMc01461 -0.9 -2.9 DNA helicase II protein compare
SMc02856 -0.9 -4.7 penicillin-binding protein compare
SMc02631 -0.9 -1.3 hypothetical protein compare
SMc00009 -0.8 -3.7 cytochrome C oxidase subunit II protein compare
SMc02714 -0.8 -0.8 hypothetical protein compare
SMa1101 -0.8 -1.2 hypothetical protein compare
SMc02639 -0.8 -1.3 transcriptional regulator compare
SMa1765 -0.8 -0.8 hypothetical protein compare
SMc02365 -0.8 -3.6 protease precursor protein compare
SMc00495 -0.8 -1.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc01360 -0.8 -0.5 aspartate carbamoyltransferase catalytic subunit compare
SMc01091 -0.8 -1.4 hypothetical protein compare
SMc00085 -0.8 -3.3 cytochrome oxidase complex biogenesis factor transmembrane protein compare
SM_b20711 -0.8 -1.6 hypothetical protein compare
SMa0545 -0.8 -1.7 hypothetical protein compare
SMa0831 -0.8 -2.2 NifX iron-molybdenum cluster-binding protein compare
SMc02449 -0.8 -1.1 acetyltransferase compare
SMc02165 -0.8 -1.4 orotate phosphoribosyltransferase compare
SMc02319 -0.8 -2.9 hypothetical protein compare
SMa1556 -0.8 -2.7 Methyl-accepting chemotaxis protein compare
SMa2151 -0.8 -1.5 DNA-binding protein compare
SMc02719 -0.8 -1.0 transposase compare
SMc01112 -0.8 -2.8 hypothetical protein conserved
SMc02694 -0.8 -1.0 ATP-dependent Clp protease adaptor compare
SMc00734 -0.8 -4.9 ribonuclease RNase BN (RBN) transmembrane protein compare
SMa2335 -0.8 -3.6 hypothetical protein compare
SMa0758 -0.8 -1.0 hypothetical protein compare
SM_b21493 -0.8 -2.2 AsnC family transcriptional regulator compare
SMc03069 -0.7 -1.2 6-phosphogluconolactonase compare
SM_b20549 -0.7 -1.5 hypothetical protein compare
SMa1201 -0.7 -1.8 hypothetical protein compare
SMc00061 -0.7 -2.7 hypothetical protein compare
SMc04384 -0.7 -4.7 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
SMa0211 -0.7 -0.8 hypothetical protein compare
SMc02787 -0.7 -1.2 hypothetical protein compare
SMc02659 -0.7 -2.9 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc00174 -0.7 -2.6 hypothetical protein compare
SMc03008 -0.7 -0.9 chemotaxis protein compare
SMa1176 -0.7 -1.4 hypothetical protein compare
SMa1099 -0.7 -1.4 CycB1 cytochrome c-552 precursor compare
SMc01471 -0.7 -1.3 cytochrome C oxidase assembly factor transmembrane protein compare
SMc02635 -0.7 -2.9 DNA repair protein RecO compare
SMc03800 -0.7 -1.8 hypothetical protein compare
SM_b20313 -0.7 -2.1 glycerone kinase compare
SMa0816 -0.7 -1.8 FixX ferredoxin-like protein compare
SMc02827 -0.7 -1.4 hypothetical protein compare
SMc00176 -0.7 -2.6 hypothetical protein compare
SM_b20904 -0.7 -1.4 sugar uptake ABC transporter ATP-binding protein compare
SM_b20236 -0.7 -2.1 hypothetical protein compare
SMc03930 -0.7 -0.8 sarcosine oxidase subunit gamma compare
SMc01553 -0.7 -1.2 acyl carrier protein compare
SMa1136 -0.7 -1.4 hypothetical protein compare
SMc01099 -0.7 -1.3 tRNA pseudouridine synthase A compare
SM_b20955 -0.7 -1.2 endo-beta-1,3-1,4-glycanase compare
SMc00854 -0.7 -0.7 hypothetical protein compare
SMc00795 -0.7 -1.9 hypothetical protein compare
SMa0754 -0.7 -1.4 hypothetical protein compare
SM_b20837 -0.6 -1.3 hypothetical protein compare
SMc02058 -0.6 -0.9 YAJC protein compare
SMc01176 -0.6 -1.6 hypothetical protein compare
SMa0775 -0.6 -1.7 hypothetical protein compare
SMc00489 -0.6 -1.8 hypothetical protein compare
SMc01346 -0.6 -1.9 leucyl/phenylalanyl-tRNA--protein transferase compare
SM_b21669 -0.6 -1.2 hypothetical protein compare
SMc02287 -0.6 -0.7 DNA-invertase compare
SM_b20921 -0.6 -1.4 hypothetical protein compare
SMc03899 -0.6 -0.9 hypothetical protein compare
SMc02484 -0.6 -1.9 amino acid efflux transmembrane protein compare
SMa2020 -0.6 -2.5 Transcriptional regulator compare
SMc03047 -0.6 -4.2 flagellar hook protein FlgE compare
SMc01508 -0.6 -1.7 hypothetical protein compare
SMc03889 -0.6 -2.0 transporter compare
SMc01147 -0.6 -1.0 coproporphyrinogen III oxidase compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in stress experiments

For stress 3-octanone across organisms