Experiment set19S237 for Sinorhizobium meliloti 1021

Compare to:

LB with 3-octanone 5.310333333 mM

200 most important genes:

  gene name fitness t score description  
SMc00236 -5.0 -3.4 Indole-3-glycerol phosphate synthase compare
SMc02767 -4.9 -8.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02725 -4.6 -11.8 anthranilate synthase compare
SMa1635 -4.6 -2.1 hypothetical protein compare
SMc02766 -4.6 -14.6 tryptophan synthase subunit beta compare
SMc02765 -4.0 -10.2 tryptophan synthase subunit alpha compare
SMc00235 -3.7 -5.0 anthranilate phosphoribosyltransferase compare
SMa0846 -3.1 -1.4 transposase, fragment compare
SMa0431 -3.0 -2.0 hypothetical protein compare
SMc04244 -2.8 -4.2 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMc03935 -2.8 -4.6 hypothetical protein compare
SMc02077 -2.7 -3.6 exodeoxyribonuclease III protein compare
SMc00239 -2.6 -1.7 hypothetical protein compare
SMc02510 -2.6 -1.2 ferric uptake regulation protein compare
SMc02897 -2.5 -2.4 cytochrome C transmembrane protein compare
SMc02850 -2.4 -3.2 DNA polymerase I compare
SMc01441 -2.4 -2.8 membrane bound protease compare
SMc00580 -2.3 -2.6 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc04385 -2.2 -5.1 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc02245 -2.2 -1.5 dihydroorotate dehydrogenase 2 compare
SMc03763 -2.2 -1.5 cytosine-specific methyltransferase compare
SMa0753 -2.2 -1.0 hypothetical protein compare
SMc02906 -2.2 -1.0 hypothetical protein compare
SMc03182 -2.2 -5.9 pH adaptation potassium efflux system E transmembrane protein compare
SMc00010 -2.1 -1.4 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc00492 -2.1 -0.9 hypothetical protein compare
SMc02434 -2.1 -2.4 hypothetical protein compare
SMc01595 -2.0 -1.4 sensor histidine kinase transmembrane protein compare
SMa1174 -2.0 -1.9 hypothetical protein compare
SMc01242 -1.9 -2.2 signal peptide protein compare
SMc04085 -1.9 -1.9 hypothetical protein compare
SMc01208 -1.9 -1.8 peptidyl-prolyl cis-trans isomerase B protein compare
SMc02050 -1.9 -2.5 trigger factor compare
SMc03183 -1.8 -6.8 monovalent cation/H+ antiporter subunit F compare
SMc00963 -1.8 -1.2 hypothetical protein compare
SMc00053 -1.8 -1.1 monovalent cation/H+ antiporter subunit C compare
SMc01850 -1.8 -1.7 hypothetical protein compare
SMc00576 -1.8 -2.9 hypothetical protein compare
SMc03900 -1.8 -7.0 cyclic beta-1,2-glucan ABc transporter compare
SMc03181 -1.7 -7.8 monovalent cation/H+ antiporter subunit D compare
SMc03179 -1.7 -9.7 monovalent cation/H+ antiporter subunit A compare
SMc04005 -1.7 -7.1 pyruvate kinase compare
SMc04245 -1.7 -7.9 high-affinity zinc uptake system ABC transporter protein compare
SMa0789 -1.7 -1.6 GntR family transcriptional regulator compare
SMc01417 -1.7 -2.4 hypothetical protein compare
SM_b20563 -1.7 -1.6 hypothetical protein compare
SMc01007 -1.6 -2.1 hypothetical protein compare
SMc00555 -1.6 -1.7 colicin V production transmembrane protein compare
SMc04243 -1.6 -4.0 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc03967 -1.6 -1.0 Holliday junction resolvase compare
SMc01800 -1.6 -1.2 cytochrome C oxidase assembly transmembrane protein compare
SMc03863 -1.5 -1.4 50S ribosomal protein L19 compare
SMc00981 -1.5 -3.2 ferredoxin protein compare
SMc01769 -1.5 -7.1 hypothetical protein compare
SMc00876 -1.5 -3.0 ATP-binding MRP protein compare
SMc02055 -1.5 -1.4 phytoene synthase compare
SMc03180 -1.5 -4.0 monovalent cation/H+ antiporter subunit C compare
SMc00013 -1.5 -2.0 cytochrome C oxidase subunit III transmembrane protein compare
SMc03046 -1.4 -4.2 transcriptional regulator compare
SMc02234 -1.4 -1.3 hypothetical protein compare
SMc02084 -1.4 -0.9 biopolymer transport transmembrane protein compare
SMc01206 -1.4 -1.4 queuine tRNA-ribosyltransferase compare
SMa0545 -1.4 -2.5 hypothetical protein compare
SMc00419 -1.3 -2.3 glutathione synthetase compare
SMc02362 -1.3 -1.5 cytochrome c-type biogenesis protein CcmE compare
SMc01877 -1.3 -5.0 DNA repair protein compare
SMc00450 -1.3 -0.9 protoheme IX farnesyltransferase compare
SMc01124 -1.3 -7.3 PII uridylyl-transferase compare
SMc00412 -1.3 -0.9 orotidine 5'-phosphate decarboxylase compare
SMc00189 -1.3 -4.0 cytochrome C1 protein compare
SMc04327 -1.3 -0.8 hypothetical protein compare
SMc02985 -1.3 -1.2 hypothetical protein compare
SMc03834 -1.3 -1.4 pterin-4-alpha-carbinolamine dehydratase compare
SM_b22001 -1.3 -1.2 hypothetical protein compare
SMc00619 -1.2 -1.2 hypothetical protein compare
SMc00556 -1.2 -3.6 DNA repair protein RadA compare
SMc00302 -1.2 -2.2 hypothetical protein compare
SMc02107 -1.2 -1.1 hypothetical protein compare
SMc00349 -1.2 -4.2 GTP-binding protein LepA compare
SMc00982 -1.2 -1.9 dioxygenase compare
SMa0776 -1.2 -1.2 TRm23b IS ATP-binding protein compare
SMc00175 -1.2 -4.2 ABC transporter ATP-binding protein compare
SMc02695 -1.2 -3.0 GTP-dependent nucleic acid-binding protein EngD compare
SMc02659 -1.1 -3.1 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc00188 -1.1 -4.1 cytochrome B transmembrane protein compare
SMc03157 -1.1 -6.3 outer membrane lipoprotein transmembrane compare
SMc02908 -1.1 -3.0 recombination protein RecR compare
SMc02165 -1.1 -1.5 orotate phosphoribosyltransferase compare
SMc04246 -1.1 -1.9 transmembrane signal peptide protein compare
SMa5010 -1.1 -1.2 hypothetical protein compare
SMc00293 -1.1 -4.6 homoserine dehydrogenase compare
SMc00914 -1.1 -1.7 oxidoreductase compare
SMc00494 -1.1 -1.7 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc00351 -1.1 -0.9 hypothetical protein compare
SM_b21084 -1.0 -1.5 hypothetical protein compare
SMc00458 -1.0 -5.4 transcriptional regulator compare
SMc03127 -1.0 -1.3 ABC transporter permease compare
SMc00012 -1.0 -1.6 cytochrome C oxidase assembly protein compare
SMc00791 -1.0 -2.2 hypothetical protein compare
SMc00760 -1.0 -2.1 recombinase A compare
SMc03184 -1.0 -1.2 PH adaptation potassium efflux system G transmembrane protein compare
SM_b20413 -1.0 -1.1 hypothetical protein compare
SM_b20810 -1.0 -3.9 membrane-located cell surface saccharide acetylase compare
SMa1073 -1.0 -0.9 TRm23b IS ATP-binding protein compare
SMc01222 -1.0 -1.9 lipopolysaccharide core biosynthesis glycosyl transferase compare
SM_b21156 -1.0 -3.4 hypothetical protein compare
SMc00187 -1.0 -2.0 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc04382 -0.9 -7.8 beta-(1,2)-glucan production associated transmembrane protein compare
SMc03941 -0.9 -1.7 hypothetical protein compare
SMc02520 -0.9 -0.9 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc03158 -0.9 -2.1 ABC transporter permease compare
SMc01036 -0.9 -1.2 hypothetical protein compare
SMa0964 -0.9 -1.2 hypothetical protein compare
SMc01723 -0.9 -1.7 hypothetical protein compare
SM_b21175 -0.9 -2.0 phosphate uptake ABC transporter permease compare
SM_b21176 -0.9 -2.2 phosphate uptake ABC transporter substrate-binding protein precursor compare
SM_b21213 -0.9 -2.4 serinethreonine protein phosphatase compare
SMc02685 -0.9 -2.1 hypothetical protein compare
SMa0775 -0.9 -1.9 hypothetical protein compare
SMc00085 -0.9 -3.8 cytochrome oxidase complex biogenesis factor transmembrane protein compare
SM_b20258 -0.9 -2.6 transcriptional regulator compare
SMc03996 -0.9 -2.6 thiamine-phosphate pyrophosphorylase compare
SMc02635 -0.9 -3.5 DNA repair protein RecO compare
SMc02238 -0.9 -0.8 hypothetical protein compare
SMc00554 -0.9 -3.8 amidophosphoribosyltransferase compare
SMc02863 -0.8 -3.8 recombination protein F compare
SMc02755 -0.8 -3.4 S-adenosyl-L-homocysteine hydrolase compare
SMa0748 -0.8 -1.2 MucR family transcriptional regulator compare
SMc04002 -0.8 -2.5 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc04003 -0.8 -1.5 50S ribosomal protein L36 compare
SMa1101 -0.8 -1.2 hypothetical protein compare
SMc01826 -0.8 -1.8 ABC transporter permease compare
SMc02155 -0.8 -4.9 hypothetical protein compare
SMc02143 -0.8 -2.0 phosphate ABC transporter permease compare
SMc01260 -0.8 -1.3 transcriptional regulator compare
SMc00656 -0.8 -1.4 hypothetical protein compare
SMc01440 -0.8 -1.7 hydrolase serine protease transmembrane protein compare
SM_b21397 -0.8 -1.6 hypothetical protein compare
SMc00987 -0.8 -1.1 hypothetical protein compare
SMc04221 -0.8 -1.5 hypothetical protein compare
SMc02636 -0.8 -2.1 hypothetical protein compare
SMc04384 -0.8 -4.0 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
SMc02141 -0.8 -1.0 phosphate transporter PhoU compare
SMc02833 -0.8 -0.8 penicillin-insensitive murein endopeptidase compare
SM_b20303 -0.8 -2.6 hypothetical protein compare
SMc02361 -0.8 -2.9 cytochrome C-type biogenesis transmembrane protein compare
SMc03279 -0.8 -0.8 transposase number 2 for insertion sequence ISRM28 compare
SMc03070 -0.8 -1.6 glucose-6-phosphate 1-dehydrogenase compare
SMa0265 -0.8 -1.6 dehydrogenase compare
SMc01579 -0.7 -0.9 hypothetical protein compare
SM_b21177 -0.7 -3.0 phosphate uptake ABC transporter ATP-binding protein compare
SMa0824 -0.7 -2.8 hypothetical protein compare
SMc03100 -0.7 -0.8 hypothetical protein compare
SMc03833 -0.7 -1.9 hypothetical protein compare
SMa0797 -0.7 -1.8 hypothetical protein compare
SMa0343 -0.7 -1.6 hypothetical protein compare
SM_b20474 -0.7 -1.5 hypothetical protein compare
SMa1200 -0.7 -2.1 hypothetical protein compare
SMc03242 -0.7 -1.4 GTP-binding protein compare
SM_b21569 -0.7 -1.2 transcriptional regulator compare
SMc00882 -0.7 -2.5 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
SMc04357 -0.7 -0.8 hypothetical protein compare
SMc01112 -0.7 -2.4 hypothetical protein conserved
SMc02166 -0.7 -2.3 dihydroorotase compare
SM_b21561 -0.7 -2.3 two component response regulator protein compare
SMc01229 -0.7 -2.2 acetyltransferase compare
SM_b20148 -0.7 -1.8 transcriptional regulator compare
SM_b21665 -0.7 -1.2 hypothetical protein compare
SM_b21181 -0.7 -3.4 glutaryl-CoA dehydrogenase compare
SMa0520 -0.7 -1.9 RpiR family transcriptional regulator compare
SMc00177 -0.7 -1.9 hypothetical protein compare
SMc03069 -0.7 -0.6 6-phosphogluconolactonase compare
SMc00174 -0.7 -2.5 hypothetical protein compare
SMa1704 -0.7 -2.3 hypothetical protein compare
SMc03878 -0.7 -1.3 acetoacetyl-CoA reductase compare
SMa1639 -0.7 -1.0 hypothetical protein compare
SM_b20218 -0.7 -2.0 sensor histidine kinase compare
SMc04199 -0.7 -2.3 hypothetical protein compare
SMc01119 -0.7 -1.0 hypothetical protein compare
SMc01207 -0.7 -1.2 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SM_b21509 -0.7 -1.9 plasmid stability protein compare
SMa1120 -0.7 -1.7 ABC transporter ATP-binding protein compare
SMc03091 -0.7 -1.9 arginase compare
SMc02112 -0.7 -2.6 hypothetical protein compare
SMc01120 -0.7 -2.3 hypothetical protein compare
SMc04088 -0.6 -3.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc01347 -0.6 -0.9 hypothetical protein compare
SMc02983 -0.6 -2.2 ornithine, DAP, or arginine decarboxylase compare
SMc01581 -0.6 -1.7 hypothetical protein compare
SMc01346 -0.6 -1.5 leucyl/phenylalanyl-tRNA--protein transferase compare
SMc01461 -0.6 -2.3 DNA helicase II protein compare
SM_b21182 -0.6 -2.6 hypothetical protein compare
SMa0106 -0.6 -2.0 ABC transporter permease compare
SM_b20547 -0.6 -1.0 hypothetical protein compare
SMa0841 -0.6 -1.2 transposase, fragment compare
SMa1367 -0.6 -1.3 short chain alcohol dehydrogenase-related dehydrogenase compare
SMc02137 -0.6 -2.6 ornithine carbamoyltransferase compare
SMc01431 -0.6 -4.4 acetolactate synthase 3 catalytic subunit compare
SM_b21157 -0.6 -2.3 translation initiation inhibitor protein compare
SMc02856 -0.6 -3.5 penicillin-binding protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in stress experiments

For stress 3-octanone across organisms