Experiment set19S233 for Sinorhizobium meliloti 1021

Compare to:

LB with 3-octanone 0.456 mM

200 most important genes:

  gene name fitness t score description  
SMc00236 -5.0 -3.5 Indole-3-glycerol phosphate synthase compare
SMa1635 -4.6 -2.0 hypothetical protein compare
SMc00235 -4.5 -5.3 anthranilate phosphoribosyltransferase compare
SMc02766 -4.3 -14.6 tryptophan synthase subunit beta compare
SMc02725 -4.1 -11.6 anthranilate synthase compare
SMc02767 -3.8 -9.4 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc03182 -3.8 -5.5 pH adaptation potassium efflux system E transmembrane protein compare
SMc02765 -3.6 -10.7 tryptophan synthase subunit alpha compare
SMc01208 -3.6 -2.4 peptidyl-prolyl cis-trans isomerase B protein compare
SMc03180 -3.0 -6.9 monovalent cation/H+ antiporter subunit C compare
SMc03179 -2.9 -12.4 monovalent cation/H+ antiporter subunit A compare
SMc03183 -2.8 -8.4 monovalent cation/H+ antiporter subunit F compare
SMc03181 -2.7 -10.4 monovalent cation/H+ antiporter subunit D compare
SMc03935 -2.7 -5.0 hypothetical protein compare
SMa0740 -2.6 -1.5 hypothetical protein compare
SMc04385 -2.5 -5.3 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc01769 -2.5 -9.7 hypothetical protein compare
SMc00012 -2.4 -2.5 cytochrome C oxidase assembly protein compare
SMc01207 -2.4 -2.8 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc00982 -2.3 -2.2 dioxygenase compare
SMc02897 -2.3 -2.2 cytochrome C transmembrane protein compare
SMc00576 -2.3 -3.4 hypothetical protein compare
SMc00981 -2.2 -4.0 ferredoxin protein compare
SMc03900 -2.2 -8.0 cyclic beta-1,2-glucan ABc transporter compare
SMc01850 -2.2 -1.5 hypothetical protein compare
SMc03763 -2.2 -1.5 cytosine-specific methyltransferase compare
SMc03863 -2.2 -2.2 50S ribosomal protein L19 compare
SMc02906 -2.2 -0.9 hypothetical protein compare
SMc00580 -2.0 -2.7 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc00963 -1.9 -1.3 hypothetical protein compare
SMc01471 -1.9 -3.1 cytochrome C oxidase assembly factor transmembrane protein compare
SMc04245 -1.9 -7.6 high-affinity zinc uptake system ABC transporter protein compare
SMc00053 -1.9 -1.1 monovalent cation/H+ antiporter subunit C compare
SMc02713 -1.8 -1.8 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc04243 -1.8 -4.4 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc02753 -1.8 -0.7 PTS system transporter subunit IIA compare
SMc00189 -1.8 -5.6 cytochrome C1 protein compare
SMc04085 -1.8 -2.1 hypothetical protein compare
SMc02245 -1.7 -1.6 dihydroorotate dehydrogenase 2 compare
SMc00010 -1.7 -1.6 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc03184 -1.7 -1.8 PH adaptation potassium efflux system G transmembrane protein compare
SMc04244 -1.7 -3.8 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMc00876 -1.7 -3.8 ATP-binding MRP protein compare
SMc03070 -1.7 -2.5 glucose-6-phosphate 1-dehydrogenase compare
SMc00241 -1.7 -2.6 transcriptional regulator compare
SMa1770 -1.6 -1.5 hypothetical protein compare
SMc00013 -1.6 -2.2 cytochrome C oxidase subunit III transmembrane protein compare
SMc02659 -1.6 -4.9 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc01112 -1.6 -5.6 hypothetical protein conserved
SMa1921 -1.6 -2.0 hypothetical protein compare
SMc04003 -1.5 -2.2 50S ribosomal protein L36 compare
SMc00821 -1.5 -0.8 hypothetical protein compare
SM_b21633 -1.5 -1.7 enoyl-CoA hydratase compare
SMc02084 -1.5 -0.9 biopolymer transport transmembrane protein compare
SM_b20810 -1.5 -5.4 membrane-located cell surface saccharide acetylase compare
SMa0964 -1.5 -2.4 hypothetical protein compare
SMc03850 -1.5 -0.8 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc02234 -1.5 -1.4 hypothetical protein compare
SMa1136 -1.5 -2.5 hypothetical protein compare
SMc00823 -1.5 -1.9 hypothetical protein compare
SMa0789 -1.4 -1.7 GntR family transcriptional regulator compare
SMc03069 -1.4 -1.7 6-phosphogluconolactonase compare
SMc03046 -1.4 -4.6 transcriptional regulator compare
SMc00298 -1.4 -2.8 methionine aminopeptidase compare
SMc01007 -1.4 -1.9 hypothetical protein compare
SMc00450 -1.4 -0.9 protoheme IX farnesyltransferase compare
SMc00188 -1.4 -4.6 cytochrome B transmembrane protein compare
SMc02755 -1.4 -5.0 S-adenosyl-L-homocysteine hydrolase compare
SM_b20948 -1.4 -0.8 glucosyltransferase compare
SMc02641 -1.4 -1.3 UDP-glucose 6-dehydrogenase compare
SMc02985 -1.4 -0.9 hypothetical protein compare
SMc02850 -1.4 -2.6 DNA polymerase I compare
SMc00458 -1.3 -6.8 transcriptional regulator compare
SMc04382 -1.3 -10.1 beta-(1,2)-glucan production associated transmembrane protein compare
SMc00412 -1.3 -0.9 orotidine 5'-phosphate decarboxylase compare
SMc00760 -1.3 -2.9 recombinase A compare
SMc03878 -1.3 -2.4 acetoacetyl-CoA reductase compare
SMc04266 -1.3 -2.5 hypothetical protein compare
SMa0520 -1.3 -3.1 RpiR family transcriptional regulator compare
SMc00293 -1.3 -4.6 homoserine dehydrogenase compare
SMc02833 -1.3 -1.2 penicillin-insensitive murein endopeptidase compare
SMc00856 -1.3 -0.7 hypothetical protein compare
SMc01124 -1.2 -5.0 PII uridylyl-transferase compare
SMc02983 -1.2 -3.6 ornithine, DAP, or arginine decarboxylase compare
SMc01164 -1.2 -4.6 hypothetical protein compare
SMc02165 -1.2 -1.2 orotate phosphoribosyltransferase compare
SMc02863 -1.2 -3.1 recombination protein F compare
SMc02425 -1.2 -1.9 transcriptional regulator compare
SMc02362 -1.2 -1.5 cytochrome c-type biogenesis protein CcmE compare
SMc00349 -1.2 -4.1 GTP-binding protein LepA compare
SMc02077 -1.2 -1.3 exodeoxyribonuclease III protein compare
SMc02640 -1.2 -1.3 UDP-glucuronic acid epimerase compare
SMc00711 -1.2 -4.3 cyclohexadienyl dehydrogenase compare
SMc02908 -1.1 -3.3 recombination protein RecR compare
SMc02071 -1.1 -2.5 hydrolase glycosidase compare
SMc02504 -1.1 -4.8 transcriptional regulator compare
SMc02647 -1.1 -1.0 transcriptional regulator compare
SMc00174 -1.1 -4.0 hypothetical protein compare
SMa1323 -1.1 -1.8 Transcription regulator compare
SMc01768 -1.1 -3.4 transcriptional regulator compare
SMc03008 -1.1 -1.3 chemotaxis protein compare
SMc01877 -1.1 -4.1 DNA repair protein compare
SMc01342 -1.1 -2.3 hypothetical protein compare
SMc00647 -1.1 -3.8 ribosomal large subunit pseudouridine synthase compare
SMc02503 -1.1 -5.1 hypothetical protein compare
SMc01433 -1.1 -3.0 hypothetical protein compare
SMc01595 -1.1 -1.2 sensor histidine kinase transmembrane protein compare
SMa1838 -1.0 -2.7 dehydrogenase compare
SM_b21182 -1.0 -4.2 hypothetical protein compare
SMc04005 -1.0 -4.9 pyruvate kinase compare
SMc01099 -1.0 -1.6 tRNA pseudouridine synthase A compare
SMc04383 -1.0 -2.9 putative hydrolase, required for lysine catabolism (from data) compare
SMc02115 -1.0 -0.4 hypothetical protein compare
SMc04313 -1.0 -1.6 hypothetical protein compare
SMc01001 -1.0 -5.1 hypothetical protein compare
SMc02434 -1.0 -1.4 hypothetical protein compare
SMc00493 -1.0 -2.9 phosphoribosylformylglycinamidine synthase I compare
SMc00555 -1.0 -1.2 colicin V production transmembrane protein compare
SMc01800 -1.0 -0.7 cytochrome C oxidase assembly transmembrane protein compare
SM_b21397 -1.0 -1.3 hypothetical protein compare
SMa0085 -1.0 -3.3 dehydrogenase compare
SMc02520 -1.0 -0.9 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SM_b21454 -1.0 -1.1 hypothetical protein compare
SMc01858 -1.0 -1.2 S-adenosyl-methyltransferase MraW compare
SM_b20411 -0.9 -1.4 hypothetical protein compare
SMc02361 -0.9 -3.6 cytochrome C-type biogenesis transmembrane protein compare
SMc04239 -0.9 -1.7 hypothetical protein compare
SMc00566 -0.9 -2.9 hypothetical protein compare
SMc01431 -0.9 -6.5 acetolactate synthase 3 catalytic subunit compare
SMc02238 -0.9 -0.8 hypothetical protein compare
SMa1056 -0.9 -1.3 transcriptional regulator compare
SMc01242 -0.9 -1.3 signal peptide protein compare
SMc01360 -0.9 -0.6 aspartate carbamoyltransferase catalytic subunit compare
SMc00187 -0.9 -1.2 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc03159 -0.9 -1.7 ABC transporter ATP-binding protein compare
SMc02166 -0.9 -2.6 dihydroorotase compare
SMc01144 -0.9 -2.1 ribonuclease PH compare
SMc04454 -0.8 -2.9 ABC transporter ATP-binding protein compare
SMc04220 -0.8 -1.0 transcriptional regulator compare
SMc00175 -0.8 -3.6 ABC transporter ATP-binding protein compare
SMc00029 -0.8 -1.6 hypothetical protein compare
SMc01501 -0.8 -1.4 mannitol 2-dehydrogenase compare
SMc03890 -0.8 -1.1 transcriptional regulator compare
SMc00734 -0.8 -5.3 ribonuclease RNase BN (RBN) transmembrane protein compare
SMc04384 -0.8 -4.8 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
SMc00689 -0.8 -2.6 lipoprotein compare
SMc04051 -0.8 -1.3 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc04161 -0.8 -2.5 hypothetical protein compare
SMc00419 -0.8 -1.7 glutathione synthetase compare
SMa0343 -0.8 -1.8 hypothetical protein compare
SMc00522 -0.8 -4.9 ATP-dependent RNA helicase compare
SMc03751 -0.8 -2.1 hypothetical protein compare
SMc02861 -0.8 -1.8 phosphate transporter compare
SMc01222 -0.8 -1.6 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc02695 -0.8 -2.0 GTP-dependent nucleic acid-binding protein EngD compare
SMa1365 -0.8 -0.7 ATP-binding protein compare
SMc02558 -0.8 -2.4 hypothetical protein compare
SMa1063 -0.8 -2.0 hypothetical protein compare
SM_b20942 -0.8 -2.2 UDP glucose 4-epimerase compare
SM_b20270 -0.8 -1.4 proline racemase compare
SMc00838 -0.8 -1.8 hypothetical protein compare
SMc03999 -0.8 -2.3 hypothetical protein compare
SMc02055 -0.8 -0.9 phytoene synthase compare
SMc01666 -0.8 -3.9 methionine gamma-lyase compare
SMc03047 -0.8 -4.8 flagellar hook protein FlgE compare
SMc04296 -0.8 -0.6 cell division protein FtsZ compare
SM_b21524 -0.8 -1.5 septum formation inhibitor compare
SMc00619 -0.8 -0.8 hypothetical protein compare
SMc03899 -0.8 -1.0 hypothetical protein compare
SMc04088 -0.8 -5.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc01440 -0.8 -1.7 hydrolase serine protease transmembrane protein compare
SMc04231 -0.8 -4.3 excinuclease ABC subunit B compare
SMc02866 -0.8 -2.0 transcriptional regulator compare
SMc00495 -0.7 -2.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc02561 -0.7 -1.4 hypothetical protein compare
SMc04453 -0.7 -0.5 hypothetical protein compare
SMc01556 -0.7 -1.5 hypothetical protein compare
SMa0341 -0.7 -1.6 hypothetical protein compare
SMc00712 -0.7 -0.8 hypothetical protein compare
SMa1160 -0.7 -2.4 hypothetical protein compare
SM_b21210 -0.7 -2.7 two-component response regulator protein compare
SMc00554 -0.7 -2.9 amidophosphoribosyltransferase compare
SMc00302 -0.7 -1.4 hypothetical protein compare
SMc02635 -0.7 -3.0 DNA repair protein RecO compare
SMc00882 -0.7 -2.3 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
SMa1442 -0.7 -2.0 GntR family transcriptional regulator compare
SMc02631 -0.7 -1.3 hypothetical protein compare
SMc00361 -0.7 -2.1 hypothetical protein compare
SMc01454 -0.7 -5.1 hypothetical protein compare
SM_b20774 -0.7 -1.8 hypothetical protein compare
SMc02707 -0.7 -1.2 hypothetical protein compare
SMa5010 -0.7 -0.8 hypothetical protein compare
SMa0775 -0.7 -1.3 hypothetical protein compare
SMc04346 -0.7 -3.2 ketol-acid reductoisomerase compare
SMc02856 -0.7 -4.0 penicillin-binding protein compare
SMa0809 -0.7 -2.3 hypothetical protein compare
SMc02572 -0.7 -2.2 imidazole glycerol phosphate synthase subunit HisH compare
SMc03801 -0.7 -1.5 thioredoxin protein compare
SMc00615 -0.7 -3.9 phosphoribosylaminoimidazole synthetase compare
SMc00998 -0.7 -4.8 signal peptide protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress 3-octanone in Sinorhizobium meliloti 1021

For stress 3-octanone across organisms