Experiment set19S227 for Sinorhizobium meliloti 1021

Compare to:

LB with 1-octen-3-ol 0.4933903333 mM

200 most important genes:

  gene name fitness t score description  
SMc02767 -5.3 -8.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc00236 -4.9 -3.4 Indole-3-glycerol phosphate synthase compare
SMc02766 -4.8 -14.3 tryptophan synthase subunit beta compare
SMc02725 -4.6 -10.7 anthranilate synthase compare
SMc02765 -3.8 -9.3 tryptophan synthase subunit alpha compare
SMc00235 -3.8 -5.1 anthranilate phosphoribosyltransferase compare
SMc03935 -2.7 -4.8 hypothetical protein compare
SMc02850 -2.7 -3.1 DNA polymerase I compare
SMc00029 -2.7 -2.3 hypothetical protein compare
SMc04001 -2.5 -1.6 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc04244 -2.4 -3.9 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMc02695 -2.3 -3.7 GTP-dependent nucleic acid-binding protein EngD compare
SMc02897 -2.2 -2.1 cytochrome C transmembrane protein compare
SMc00760 -2.2 -3.5 recombinase A compare
SMa1635 -2.1 -1.6 hypothetical protein compare
SMc02245 -2.1 -1.5 dihydroorotate dehydrogenase 2 compare
SMc03900 -2.1 -7.7 cyclic beta-1,2-glucan ABc transporter compare
SMc03763 -2.1 -1.4 cytosine-specific methyltransferase compare
SMa0753 -2.1 -0.9 hypothetical protein compare
SMc02238 -2.0 -1.2 hypothetical protein compare
SMc01208 -1.9 -1.8 peptidyl-prolyl cis-trans isomerase B protein compare
SMa1174 -1.9 -1.7 hypothetical protein compare
SMa1095 -1.8 -1.1 hypothetical protein compare
SMc03070 -1.8 -2.1 glucose-6-phosphate 1-dehydrogenase compare
SMc01929 -1.8 -2.3 hypothetical protein compare
SMc00963 -1.7 -1.2 hypothetical protein compare
SMc04242 -1.7 -1.5 zinc uptake regulation protein compare
SMc00982 -1.7 -2.0 dioxygenase compare
SMc01471 -1.7 -2.6 cytochrome C oxidase assembly factor transmembrane protein compare
SMc01850 -1.7 -1.6 hypothetical protein compare
SMc04245 -1.7 -7.6 high-affinity zinc uptake system ABC transporter protein compare
SMc01242 -1.7 -2.7 signal peptide protein compare
SMc04243 -1.6 -3.8 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc01595 -1.6 -1.5 sensor histidine kinase transmembrane protein compare
SMc00293 -1.6 -5.2 homoserine dehydrogenase compare
SMc03182 -1.5 -2.9 pH adaptation potassium efflux system E transmembrane protein compare
SMc04085 -1.5 -1.8 hypothetical protein compare
SMc00876 -1.5 -3.2 ATP-binding MRP protein compare
SMc02077 -1.5 -2.3 exodeoxyribonuclease III protein compare
SMc00349 -1.5 -4.7 GTP-binding protein LepA compare
SM_b20728 -1.5 -2.2 hypothetical protein compare
SMc01800 -1.5 -1.1 cytochrome C oxidase assembly transmembrane protein compare
SMc02050 -1.5 -2.2 trigger factor compare
SMc03795 -1.5 -1.7 isopropylmalate isomerase small subunit compare
SMc03850 -1.4 -0.8 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMa0740 -1.4 -0.9 hypothetical protein compare
SMc04383 -1.4 -3.1 putative hydrolase, required for lysine catabolism (from data) compare
SMc02234 -1.4 -1.3 hypothetical protein compare
SMc00981 -1.4 -2.9 ferredoxin protein compare
SMa0846 -1.3 -0.8 transposase, fragment compare
SMc04005 -1.3 -5.9 pyruvate kinase compare
SM_b20948 -1.3 -0.7 glucosyltransferase compare
SMc00188 -1.3 -4.4 cytochrome B transmembrane protein compare
SMc03158 -1.3 -1.7 ABC transporter permease compare
SMc02985 -1.3 -0.9 hypothetical protein compare
SMc00189 -1.3 -4.3 cytochrome C1 protein compare
SMc04453 -1.3 -0.8 hypothetical protein compare
SMc01124 -1.3 -5.8 PII uridylyl-transferase compare
SMc03181 -1.2 -6.1 monovalent cation/H+ antiporter subunit D compare
SMc00412 -1.2 -0.8 orotidine 5'-phosphate decarboxylase compare
SMc03157 -1.2 -5.0 outer membrane lipoprotein transmembrane compare
SMc02306 -1.2 -1.5 hypothetical protein compare
SM_b21679 -1.2 -1.0 hypothetical protein compare
SMc02714 -1.2 -1.0 hypothetical protein compare
SMa5011 -1.2 -1.2 oxidoreductase compare
SMc02149 -1.2 -1.8 hypothetical protein compare
SMc03863 -1.2 -1.7 50S ribosomal protein L19 compare
SMc00012 -1.2 -1.3 cytochrome C oxidase assembly protein compare
SMc00619 -1.2 -1.1 hypothetical protein compare
SMc02755 -1.2 -4.4 S-adenosyl-L-homocysteine hydrolase compare
SMc04330 -1.2 -0.8 trimethylamine methyltransferase compare
SMc00013 -1.2 -1.5 cytochrome C oxidase subunit III transmembrane protein compare
SM_b20026 -1.1 -1.8 hypothetical protein compare
SMc02799 -1.1 -1.3 16S rRNA methyltransferase GidB compare
SMc03159 -1.1 -1.8 ABC transporter ATP-binding protein compare
SMc00073 -1.1 -1.8 hypothetical protein compare
SMc00419 -1.1 -2.0 glutathione synthetase compare
SMc04385 -1.1 -3.0 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc01877 -1.1 -2.5 DNA repair protein compare
SMc02659 -1.1 -4.1 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc02561 -1.1 -1.3 hypothetical protein compare
SM_b20810 -1.1 -3.9 membrane-located cell surface saccharide acetylase compare
SMc00856 -1.0 -0.6 hypothetical protein compare
SMc02720 -1.0 -2.6 ATP-dependent Clp protease proteolytic subunit compare
SM_b21454 -1.0 -1.2 hypothetical protein compare
SMc01826 -1.0 -2.1 ABC transporter permease compare
SMc00838 -1.0 -3.2 hypothetical protein compare
SMc02165 -1.0 -1.3 orotate phosphoribosyltransferase compare
SMc01222 -1.0 -1.7 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc01769 -1.0 -5.4 hypothetical protein compare
SMc02520 -1.0 -0.7 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc01112 -1.0 -3.7 hypothetical protein compare
SMc04382 -1.0 -8.0 beta-(1,2)-glucan production associated transmembrane protein compare
SMc02362 -1.0 -1.2 cytochrome c-type biogenesis protein CcmE compare
SMa1101 -1.0 -1.1 hypothetical protein compare
SMc03100 -1.0 -1.0 hypothetical protein compare
SMc00351 -1.0 -0.8 hypothetical protein compare
SMa2167 -0.9 -2.3 hypothetical protein compare
SMc00514 -0.9 -1.9 monooxygenase compare
SMc01089 -0.9 -1.1 hypothetical protein compare
SMc00010 -0.9 -1.1 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc00458 -0.9 -5.0 transcriptional regulator compare
SMc00239 -0.9 -0.9 hypothetical protein compare
SMc01428 -0.9 -1.9 cold shock transcription regulator protein compare
SMc03996 -0.9 -2.6 thiamine-phosphate pyrophosphorylase compare
SMc02983 -0.9 -2.8 ornithine, DAP, or arginine decarboxylase compare
SMc02407 -0.9 -2.9 hypothetical protein compare
SM_b20209 -0.9 -1.9 hypothetical protein compare
SMc03183 -0.9 -3.6 monovalent cation/H+ antiporter subunit F compare
SMc02495 -0.9 -1.2 translaldolase compare
SMc00329 -0.9 -1.3 iron response regulator protein compare
SMc02867 -0.9 -2.1 multidrug-efflux system transmembrane protein compare
SMc00355 -0.9 -1.8 hypothetical protein compare
SMc02647 -0.9 -0.8 transcriptional regulator compare
SMc02510 -0.9 -0.5 ferric uptake regulation protein compare
SMc02164 -0.9 -2.0 fructokinase compare
SMc02166 -0.9 -2.4 dihydroorotase compare
SM_b20955 -0.9 -1.6 endo-beta-1,3-1,4-glycanase compare
SMc01434 -0.9 -2.7 hypothetical protein compare
SMc01036 -0.9 -1.7 hypothetical protein compare
SMc03179 -0.9 -5.3 monovalent cation/H+ antiporter subunit A compare
SMc00554 -0.9 -3.9 amidophosphoribosyltransferase compare
SMc02787 -0.8 -2.1 hypothetical protein compare
SM_b21633 -0.8 -1.1 enoyl-CoA hydratase compare
SMc01440 -0.8 -1.7 hydrolase serine protease transmembrane protein compare
SMc02503 -0.8 -4.3 hypothetical protein compare
SM_b20307 -0.8 -0.9 dihydroxyacetone kinase compare
SMc01360 -0.8 -0.5 aspartate carbamoyltransferase catalytic subunit compare
SM_b20994 -0.8 -2.9 hypothetical protein compare
SMc00505 -0.8 -1.5 hypothetical protein compare
SMc03242 -0.8 -1.5 GTP-binding protein compare
SMc02719 -0.8 -1.0 transposase compare
SMc02856 -0.8 -4.3 penicillin-binding protein compare
SMc00576 -0.8 -1.6 hypothetical protein compare
SMc02361 -0.8 -3.2 cytochrome C-type biogenesis transmembrane protein compare
SMc04384 -0.8 -3.1 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
SMc00174 -0.8 -3.5 hypothetical protein compare
SMa0431 -0.8 -0.9 hypothetical protein compare
SMc03091 -0.8 -1.4 arginase compare
SM_b21175 -0.8 -1.8 phosphate uptake ABC transporter permease compare
SMa1770 -0.8 -0.9 hypothetical protein compare
SM_b21397 -0.8 -1.2 hypothetical protein compare
SMc01144 -0.8 -1.8 ribonuclease PH compare
SMc01347 -0.8 -1.0 hypothetical protein compare
SMc02497 -0.8 -1.0 hypothetical protein compare
SMa1099 -0.8 -1.5 CycB1 cytochrome c-552 precursor compare
SMc01119 -0.7 -0.9 hypothetical protein compare
SMc00302 -0.7 -1.1 hypothetical protein compare
SMc00647 -0.7 -2.9 ribosomal large subunit pseudouridine synthase compare
SMc00622 -0.7 -3.3 ribonuclease D protein compare
SMc00353 -0.7 -0.9 transmembrane protein compare
SMc00361 -0.7 -1.6 hypothetical protein compare
SMc01847 -0.7 -2.2 methyltransferase compare
SMc03069 -0.7 -0.9 6-phosphogluconolactonase compare
SMa1704 -0.7 -2.4 hypothetical protein compare
SMc01026 -0.7 -1.2 hypothetical protein compare
SMc05020 -0.7 -0.8 entericidin A precursor compare
SMc00187 -0.7 -1.4 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc00914 -0.7 -1.4 oxidoreductase compare
SMc03993 -0.7 -2.0 hypothetical protein compare
SMc01220 -0.7 -1.5 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc01007 -0.7 -1.0 hypothetical protein compare
SMa1585 -0.7 -2.6 hypothetical protein compare
SMc00177 -0.7 -2.5 hypothetical protein compare
SMc03128 -0.7 -1.4 ABC transporter permease compare
SMc01845 -0.7 -0.9 transglycosylase transmembrane protein compare
SMc02504 -0.7 -3.0 transcriptional regulator compare
SMc03180 -0.7 -2.6 monovalent cation/H+ antiporter subunit C compare
SMc03751 -0.6 -1.7 hypothetical protein compare
SMc01853 -0.6 -2.1 hypothetical protein compare
SM_b20711 -0.6 -1.4 hypothetical protein compare
SMa0809 -0.6 -2.7 hypothetical protein compare
SMc00175 -0.6 -2.5 ABC transporter ATP-binding protein compare
SMc02084 -0.6 -0.5 biopolymer transport transmembrane protein compare
SMc02635 -0.6 -3.0 DNA repair protein RecO compare
SMa0738 -0.6 -1.3 CspA6 cold shock protein transcriptional regulator compare
SMc02846 -0.6 -2.6 sugar kinase compare
SMc00522 -0.6 -3.9 ATP-dependent RNA helicase compare
SMc00320 -0.6 -3.2 ribosome-binding factor A compare
SMa5033 -0.6 -0.6 hypothetical protein compare
SMc00280 -0.6 -1.6 hypothetical protein compare
SMa0861 -0.6 -1.6 transposase, fragment compare
SMa0545 -0.6 -1.3 hypothetical protein compare
SMa1907 -0.6 -1.6 hypothetical protein compare
SMc00712 -0.6 -0.9 hypothetical protein compare
SMc00556 -0.6 -1.8 DNA repair protein RadA compare
SM_b21452 -0.6 -1.3 hypothetical protein compare
SMa0699 -0.6 -2.0 hypothetical protein compare
SMa5015 -0.6 -1.4 hypothetical protein compare
SM_b21494 -0.6 -3.6 ornithine cyclodeaminase compare
SM_b21213 -0.6 -1.7 serinethreonine protein phosphatase compare
SMc01578 -0.6 -3.5 aspartate aminotransferase compare
SMc00580 -0.6 -1.1 4-hydroxythreonine-4-phosphate dehydrogenase compare
SM_b21182 -0.6 -2.5 hypothetical protein compare
SMc01342 -0.6 -1.3 hypothetical protein compare
SMc02757 -0.6 -2.9 hypothetical protein compare
SMa0816 -0.6 -1.5 FixX ferredoxin-like protein compare
SMa1058 -0.6 -1.1 hypothetical protein compare
SMc01501 -0.6 -1.2 mannitol 2-dehydrogenase compare
SMc04088 -0.6 -3.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in stress experiments

For stress 1-octen-3-ol across organisms