Experiment set19S225 for Sinorhizobium meliloti 1021

Compare to:

LB with 1-octen-3-ol 0.4933903333 mM

200 most important genes:

  gene name fitness t score description  
SMc02766 -5.1 -14.2 tryptophan synthase subunit beta compare
SMc02767 -4.8 -9.1 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMa1635 -4.6 -2.1 hypothetical protein compare
SMc02725 -4.4 -12.1 anthranilate synthase compare
SM_b22001 -4.4 -3.0 hypothetical protein compare
SMc02765 -3.9 -10.3 tryptophan synthase subunit alpha compare
SMc00235 -3.0 -5.4 anthranilate phosphoribosyltransferase compare
SMc00236 -2.8 -3.8 Indole-3-glycerol phosphate synthase compare
SMc04243 -2.3 -4.1 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc02245 -2.3 -1.5 dihydroorotate dehydrogenase 2 compare
SMc02050 -2.2 -2.6 trigger factor compare
SMc03935 -2.2 -5.1 hypothetical protein compare
SMc02906 -2.2 -0.9 hypothetical protein compare
SMc04085 -2.2 -1.5 hypothetical protein compare
SMc00492 -2.1 -0.9 hypothetical protein compare
SMc01183 -2.1 -1.0 LexA repressor compare
SMc04244 -2.1 -4.3 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMa1174 -2.0 -1.9 hypothetical protein compare
SMc01207 -2.0 -2.6 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc01242 -2.0 -2.3 signal peptide protein compare
SMc00349 -2.0 -5.3 GTP-binding protein LepA compare
SMc03900 -1.9 -8.0 cyclic beta-1,2-glucan ABc transporter compare
SMc03763 -1.9 -1.8 cytosine-specific methyltransferase compare
SMc00619 -1.9 -1.3 hypothetical protein compare
SMc00981 -1.9 -3.7 ferredoxin protein compare
SMc00963 -1.9 -1.2 hypothetical protein compare
SMc02833 -1.8 -1.2 penicillin-insensitive murein endopeptidase compare
SMc01850 -1.8 -1.7 hypothetical protein compare
SMc01845 -1.7 -2.0 transglycosylase transmembrane protein compare
SMc03069 -1.7 -2.3 6-phosphogluconolactonase compare
SMc00427 -1.7 -2.3 peptide chain release factor RF-3 protein compare
SMc00555 -1.7 -1.6 colicin V production transmembrane protein compare
SMc00419 -1.7 -2.7 glutathione synthetase compare
SMc03967 -1.6 -1.0 Holliday junction resolvase compare
SMc04245 -1.6 -6.6 high-affinity zinc uptake system ABC transporter protein compare
SMc02850 -1.6 -2.7 DNA polymerase I compare
SMc00576 -1.6 -2.9 hypothetical protein compare
SMc03182 -1.6 -4.9 pH adaptation potassium efflux system E transmembrane protein compare
SMc04003 -1.6 -2.3 50S ribosomal protein L36 compare
SMc02695 -1.6 -3.4 GTP-dependent nucleic acid-binding protein EngD compare
SMa2168 -1.5 -1.6 tRNA-Met compare
SMc02901 -1.5 -1.5 hypothetical protein compare
SM_b21524 -1.5 -2.4 septum formation inhibitor compare
SMc00821 -1.5 -0.8 hypothetical protein compare
SMa0846 -1.5 -0.9 transposase, fragment compare
SMc00982 -1.5 -2.3 dioxygenase compare
SMc03070 -1.5 -2.5 glucose-6-phosphate 1-dehydrogenase compare
SMc02238 -1.4 -1.1 hypothetical protein compare
SMc04453 -1.4 -0.9 hypothetical protein compare
SMc02985 -1.4 -0.9 hypothetical protein compare
SMc03158 -1.4 -2.9 ABC transporter permease compare
SMc02659 -1.4 -3.3 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc00412 -1.3 -0.9 orotidine 5'-phosphate decarboxylase compare
SMc00012 -1.3 -1.9 cytochrome C oxidase assembly protein compare
SMc04385 -1.3 -3.1 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc04005 -1.3 -6.3 pyruvate kinase compare
SMc01858 -1.3 -1.1 S-adenosyl-methyltransferase MraW compare
SMc01206 -1.3 -1.3 queuine tRNA-ribosyltransferase compare
SMc03008 -1.3 -1.5 chemotaxis protein compare
SMc00760 -1.3 -2.9 recombinase A compare
SMc02107 -1.3 -1.1 hypothetical protein compare
SMa1099 -1.3 -1.8 CycB1 cytochrome c-552 precursor compare
SMc02232 -1.3 -0.8 hypothetical protein compare
SMc02166 -1.3 -3.1 dihydroorotase compare
SMa2251 -1.3 -2.6 hypothetical protein compare
SMc00458 -1.3 -6.5 transcriptional regulator compare
SMa0663 -1.3 -2.0 hypothetical protein compare
SMc01124 -1.2 -5.7 PII uridylyl-transferase compare
SMc00010 -1.2 -1.4 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc03279 -1.2 -1.9 transposase number 2 for insertion sequence ISRM28 compare
SMc00334 -1.2 -0.9 cytidylate kinase compare
SMc03157 -1.2 -6.2 outer membrane lipoprotein transmembrane compare
SM_b20810 -1.2 -4.2 membrane-located cell surface saccharide acetylase compare
SMc00293 -1.2 -4.2 homoserine dehydrogenase compare
SMc01769 -1.2 -6.5 hypothetical protein compare
SMc02897 -1.2 -1.5 cytochrome C transmembrane protein compare
SM_b20302 -1.2 -2.2 hypothetical protein compare
SMc00189 -1.2 -2.6 cytochrome C1 protein compare
SMa2289 -1.2 -1.4 hypothetical protein compare
SMc00187 -1.2 -3.1 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc00329 -1.1 -1.2 iron response regulator protein compare
SMc03863 -1.1 -1.8 50S ribosomal protein L19 compare
SMc04242 -1.1 -1.2 zinc uptake regulation protein compare
SMc00013 -1.1 -1.4 cytochrome C oxidase subunit III transmembrane protein compare
SMc02755 -1.1 -4.3 S-adenosyl-L-homocysteine hydrolase compare
SMc03159 -1.1 -2.1 ABC transporter ATP-binding protein compare
SMc00514 -1.1 -2.1 monooxygenase compare
SMc03181 -1.1 -4.9 monovalent cation/H+ antiporter subunit D compare
SMc02544 -1.1 -0.8 hypothetical protein compare
SMc01440 -1.0 -2.9 hydrolase serine protease transmembrane protein compare
SMc01842 -1.0 -1.8 methyltransferase transcription regulator protein compare
SMc00188 -1.0 -4.0 cytochrome B transmembrane protein compare
SMc02812 -1.0 -2.3 hypothetical protein compare
SMc02141 -1.0 -1.1 phosphate transporter PhoU compare
SMc01595 -1.0 -1.1 sensor histidine kinase transmembrane protein compare
SMc01036 -1.0 -1.9 hypothetical protein compare
SMc00876 -1.0 -2.4 ATP-binding MRP protein compare
SMc01364 -1.0 -0.7 DNA topoisomerase I compare
SM_b21454 -1.0 -1.2 hypothetical protein compare
SMc04454 -1.0 -3.2 ABC transporter ATP-binding protein compare
SMa0424 -0.9 -3.4 ATP-dependent DNA ligase compare
SMc02115 -0.9 -0.4 hypothetical protein compare
SMc02165 -0.9 -1.6 orotate phosphoribosyltransferase compare
SMc03183 -0.9 -3.7 monovalent cation/H+ antiporter subunit F compare
SMc00494 -0.9 -1.5 phosphoribosylformylglycinamidine synthase subunit PurS compare
SM_b20086 -0.9 -1.6 hypothetical protein compare
SMc02983 -0.9 -3.1 ornithine, DAP, or arginine decarboxylase compare
SMc02434 -0.9 -1.6 hypothetical protein compare
SMc02077 -0.9 -1.3 exodeoxyribonuclease III protein compare
SMc02495 -0.9 -1.0 translaldolase compare
SMc02561 -0.9 -1.6 hypothetical protein compare
SMc01220 -0.9 -2.0 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc01929 -0.9 -1.6 hypothetical protein compare
SMc04382 -0.9 -7.3 beta-(1,2)-glucan production associated transmembrane protein compare
SMc00580 -0.9 -1.6 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMa0112 -0.9 -2.4 hypothetical protein compare
SMc00647 -0.9 -1.7 ribosomal large subunit pseudouridine synthase compare
SMc01768 -0.9 -2.2 transcriptional regulator compare
SMc02856 -0.9 -4.9 penicillin-binding protein compare
SMc02631 -0.9 -0.8 hypothetical protein compare
SMc00565 -0.9 -1.3 50S ribosomal protein L9 compare
SMc02144 -0.8 -0.8 phosphate ABC transporter permease compare
SM_b20837 -0.8 -1.7 hypothetical protein compare
SMc01360 -0.8 -0.5 aspartate carbamoyltransferase catalytic subunit compare
SMc02385 -0.8 -1.4 hypothetical protein compare
SMc02503 -0.8 -4.3 hypothetical protein compare
SMa1952 -0.8 -1.8 Beta lactamase compare
SMa1101 -0.8 -1.3 hypothetical protein compare
SMc00689 -0.8 -2.5 lipoprotein compare
SMc02558 -0.8 -2.9 hypothetical protein compare
SMc00711 -0.8 -3.3 cyclohexadienyl dehydrogenase compare
SMc01933 -0.8 -1.1 hypothetical protein compare
SMc00495 -0.8 -2.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMa5024 -0.8 -2.1 hypothetical protein compare
SMc01120 -0.8 -2.7 hypothetical protein compare
SMc01222 -0.8 -1.5 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMa5033 -0.8 -0.8 hypothetical protein compare
SMc00556 -0.8 -2.4 DNA repair protein RadA compare
SMc00030 -0.8 -2.3 hypothetical protein compare
SMc01112 -0.8 -3.5 hypothetical protein compare
SM_b20387 -0.8 -0.7 transcriptional regulator compare
SMc00175 -0.8 -2.5 ABC transporter ATP-binding protein compare
SMa0520 -0.8 -2.2 RpiR family transcriptional regulator compare
SMa0431 -0.8 -0.9 hypothetical protein compare
SM_b21493 -0.7 -2.3 AsnC family transcriptional regulator compare
SM_b21494 -0.7 -3.3 ornithine cyclodeaminase compare
SMa0052 -0.7 -2.0 hypothetical protein compare
SMc03179 -0.7 -4.8 monovalent cation/H+ antiporter subunit A compare
SMc02361 -0.7 -2.2 cytochrome C-type biogenesis transmembrane protein compare
SMc03800 -0.7 -2.6 hypothetical protein compare
SMa0359 -0.7 -2.4 hypothetical protein compare
SMc02978 -0.7 -2.1 hypothetical protein compare
SMa0360 -0.7 -1.4 transposase compare
SMc00320 -0.7 -3.2 ribosome-binding factor A compare
SMc03996 -0.7 -2.2 thiamine-phosphate pyrophosphorylase compare
SMc03184 -0.7 -1.0 PH adaptation potassium efflux system G transmembrane protein compare
SMc01119 -0.7 -0.9 hypothetical protein compare
SMc03051 -0.7 -1.2 flagellar biosynthesis repressor FlbT compare
SMa0189 -0.7 -1.9 hypothetical protein compare
SMc00176 -0.7 -2.6 hypothetical protein compare
SMc04428 -0.7 -1.4 hypothetical protein compare
SMc01877 -0.7 -3.2 DNA repair protein compare
SMa0758 -0.7 -1.1 hypothetical protein compare
SMc02908 -0.7 -2.5 recombination protein RecR compare
SMc01852 -0.7 -2.4 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SM_b20758 -0.7 -1.0 ArsR family transcriptional regulator compare
SM_b20880 -0.7 -3.0 ATP-dependent RNA helicase compare
SMc03748 -0.7 -3.2 hypothetical protein compare
SMc01347 -0.7 -0.9 hypothetical protein compare
SM_b20172 -0.7 -2.1 cytochrome c protein compare
SMa1595 -0.7 -1.9 hypothetical protein compare
SMa0677 -0.7 -2.6 ABC transporter substrate-binding protein compare
SM_b21182 -0.7 -3.0 hypothetical protein compare
SM_b20484 -0.7 -2.0 sugar ABC transporter substrate-binding protein compare
SMa1073 -0.7 -0.6 TRm23b IS ATP-binding protein compare
SMc00493 -0.6 -2.1 phosphoribosylformylglycinamidine synthase I compare
SMc02155 -0.6 -4.6 hypothetical protein compare
SMc01800 -0.6 -0.6 cytochrome C oxidase assembly transmembrane protein compare
SMa0738 -0.6 -1.9 CspA6 cold shock protein transcriptional regulator compare
SMa0757 -0.6 -2.1 NodD2 nod box-dependent transcription activator compare
SMc01015 -0.6 -1.8 hypothetical protein compare
SMc04383 -0.6 -1.9 putative hydrolase, required for lysine catabolism (from data) compare
SMc00554 -0.6 -3.0 amidophosphoribosyltransferase compare
SMa0728 -0.6 -1.8 hypothetical protein compare
SMc00174 -0.6 -2.0 hypothetical protein compare
SMc02640 -0.6 -0.9 UDP-glucuronic acid epimerase compare
SMc02312 -0.6 -1.8 zinc-binding protein compare
SM_b20313 -0.6 -1.8 glycerone kinase compare
SMc03127 -0.6 -0.9 ABC transporter permease compare
SM_b21591 -0.6 -1.1 GntR family transcriptional regulator compare
SMa0878 -0.6 -1.0 glucosamine--fructose-6-phosphate aminotransferase compare
SMc01026 -0.6 -1.1 hypothetical protein compare
SMc00656 -0.6 -1.2 hypothetical protein compare
SMc01579 -0.6 -0.7 hypothetical protein compare
SMa1450 -0.6 -2.2 thiolase compare
SMa2023 -0.6 -1.7 hypothetical protein compare
SMc04088 -0.6 -4.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMa0850 -0.6 -2.1 hypothetical protein compare
SM_b21004 -0.6 -2.2 hypothetical protein compare
SMc02980 -0.6 -1.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in stress experiments

For stress 1-octen-3-ol across organisms