Experiment set19S224 for Sinorhizobium meliloti 1021

Compare to:

LB with 1-octen-3-ol 0.5427293333 mM

200 most important genes:

  gene name fitness t score description  
SMc02766 -5.1 -14.0 tryptophan synthase subunit beta compare
SMa1635 -4.6 -2.2 hypothetical protein compare
SMc00235 -4.5 -5.3 anthranilate phosphoribosyltransferase compare
SMc02765 -4.0 -10.9 tryptophan synthase subunit alpha compare
SMc02767 -4.0 -9.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02725 -3.8 -12.0 anthranilate synthase compare
SMc00236 -3.3 -3.9 Indole-3-glycerol phosphate synthase compare
SM_b21173 -2.9 -2.0 hypothetical protein compare
SMa5010 -2.7 -1.8 hypothetical protein compare
SMc02510 -2.5 -1.2 ferric uptake regulation protein compare
SMc00329 -2.5 -2.9 iron response regulator protein compare
SMc03935 -2.5 -5.3 hypothetical protein compare
SMc00013 -2.5 -2.9 cytochrome C oxidase subunit III transmembrane protein compare
SMc01417 -2.3 -2.7 hypothetical protein compare
SMc03184 -2.2 -2.0 PH adaptation potassium efflux system G transmembrane protein compare
SMc03863 -2.1 -2.4 50S ribosomal protein L19 compare
SMc04244 -2.1 -4.0 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMc02906 -2.1 -1.0 hypothetical protein compare
SMa0753 -2.1 -1.0 hypothetical protein compare
SMc00012 -2.1 -2.1 cytochrome C oxidase assembly protein compare
SMc01595 -2.0 -1.4 sensor histidine kinase transmembrane protein compare
SMc00760 -1.9 -3.6 recombinase A compare
SMc02641 -1.9 -1.3 UDP-glucose 6-dehydrogenase compare
SMc03181 -1.9 -7.6 monovalent cation/H+ antiporter subunit D compare
SMc04085 -1.9 -1.8 hypothetical protein compare
SMc03763 -1.9 -1.8 cytosine-specific methyltransferase compare
SMc00963 -1.8 -1.2 hypothetical protein compare
SMc02362 -1.8 -1.7 cytochrome c-type biogenesis protein CcmE compare
SMc02107 -1.8 -1.4 hypothetical protein compare
SMc00982 -1.8 -2.4 dioxygenase compare
SMc02753 -1.8 -0.8 PTS system transporter subunit IIA compare
SMc04005 -1.7 -6.4 pyruvate kinase compare
SMc00876 -1.7 -3.4 ATP-binding MRP protein compare
SMc03183 -1.7 -6.4 monovalent cation/H+ antiporter subunit F compare
SMc00576 -1.7 -3.0 hypothetical protein compare
SMc03179 -1.7 -9.0 monovalent cation/H+ antiporter subunit A compare
SMc01207 -1.7 -2.2 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc03900 -1.7 -7.3 cyclic beta-1,2-glucan ABc transporter compare
SMc02850 -1.7 -2.2 DNA polymerase I compare
SMc01007 -1.7 -2.2 hypothetical protein compare
SMc02245 -1.7 -1.6 dihydroorotate dehydrogenase 2 compare
SMc04245 -1.7 -7.0 high-affinity zinc uptake system ABC transporter protein compare
SMc00514 -1.6 -2.9 monooxygenase compare
SMc01800 -1.6 -1.2 cytochrome C oxidase assembly transmembrane protein compare
SMc04243 -1.6 -4.0 high-affinity zinc uptake system membrane ABC transporter protein compare
SMa1658 -1.6 -1.5 hypothetical protein compare
SMc02435 -1.5 -1.4 methyltransferase compare
SMc02505 -1.5 -1.6 hypothetical protein compare
SMc04385 -1.5 -4.0 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc03850 -1.5 -0.8 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc00821 -1.4 -0.8 hypothetical protein compare
SMc03180 -1.4 -3.9 monovalent cation/H+ antiporter subunit C compare
SMc00176 -1.4 -4.6 hypothetical protein compare
SMa0846 -1.4 -0.9 transposase, fragment compare
SM_b20955 -1.4 -2.2 endo-beta-1,3-1,4-glycanase compare
SMc00355 -1.4 -2.4 hypothetical protein compare
SMc02695 -1.4 -3.0 GTP-dependent nucleic acid-binding protein EngD compare
SMc03182 -1.4 -3.2 pH adaptation potassium efflux system E transmembrane protein compare
SMc03158 -1.4 -1.9 ABC transporter permease compare
SMc01183 -1.4 -1.1 LexA repressor compare
SMc02114 -1.4 -1.5 hypothetical protein compare
SMc01769 -1.3 -7.1 hypothetical protein compare
SMc02714 -1.3 -1.2 hypothetical protein compare
SM_b20948 -1.3 -0.8 glucosyltransferase compare
SMc02238 -1.3 -1.0 hypothetical protein compare
SMc03979 -1.3 -1.9 glyceraldehyde-3-phosphate dehydrogenase compare
SMc00450 -1.3 -0.9 protoheme IX farnesyltransferase compare
SMc00175 -1.3 -4.9 ABC transporter ATP-binding protein compare
SM_b20810 -1.3 -5.0 membrane-located cell surface saccharide acetylase compare
SMc02985 -1.3 -0.9 hypothetical protein compare
SMc00419 -1.3 -2.2 glutathione synthetase compare
SMc00349 -1.3 -4.2 GTP-binding protein LepA compare
SMc00412 -1.3 -0.9 orotidine 5'-phosphate decarboxylase compare
SMc01242 -1.3 -2.3 signal peptide protein compare
SMc00619 -1.3 -1.2 hypothetical protein compare
SMc00187 -1.3 -2.9 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc02077 -1.2 -2.2 exodeoxyribonuclease III protein compare
SMc02166 -1.2 -2.9 dihydroorotase compare
SMc00188 -1.2 -4.4 cytochrome B transmembrane protein compare
SMc02232 -1.2 -0.8 hypothetical protein compare
SMc00293 -1.2 -4.3 homoserine dehydrogenase compare
SMc01124 -1.2 -5.5 PII uridylyl-transferase compare
SMc02659 -1.2 -2.7 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMa0878 -1.2 -1.4 glucosamine--fructose-6-phosphate aminotransferase compare
SMc02755 -1.2 -4.3 S-adenosyl-L-homocysteine hydrolase compare
SMc01153 -1.2 -1.7 enoyl-CoA hydratase compare
SMc02631 -1.2 -1.9 hypothetical protein compare
SMc02165 -1.1 -1.3 orotate phosphoribosyltransferase compare
SMc00194 -1.1 -3.0 hypothetical protein compare
SM_b21175 -1.1 -2.1 phosphate uptake ABC transporter permease compare
SMc03159 -1.1 -2.2 ABC transporter ATP-binding protein compare
SMc01768 -1.1 -3.6 transcriptional regulator compare
SMa0431 -1.1 -1.2 hypothetical protein compare
SMc03070 -1.1 -1.9 glucose-6-phosphate 1-dehydrogenase compare
SMa0740 -1.1 -1.1 hypothetical protein compare
SMc00981 -1.0 -2.4 ferredoxin protein compare
SMc01147 -1.0 -1.3 coproporphyrinogen III oxidase compare
SMc03069 -1.0 -1.6 6-phosphogluconolactonase compare
SMa0857 -1.0 -1.7 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase compare
SMa0748 -1.0 -1.2 MucR family transcriptional regulator compare
SMc02544 -1.0 -0.8 hypothetical protein compare
SMc01280 -1.0 -1.8 protease compare
SMc02234 -1.0 -1.1 hypothetical protein compare
SMc02250 -1.0 -2.3 large-conductance mechanosensitive channel compare
SM_b20758 -1.0 -1.5 ArsR family transcriptional regulator compare
SMa1413 -1.0 -1.6 hypothetical protein compare
SMc04001 -1.0 -1.0 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc00647 -1.0 -3.5 ribosomal large subunit pseudouridine synthase compare
SMc01441 -1.0 -1.9 membrane bound protease compare
SMc00458 -1.0 -5.2 transcriptional regulator compare
SMc04441 -0.9 -1.7 hypothetical protein compare
SMc00174 -0.9 -3.7 hypothetical protein compare
SMc04382 -0.9 -7.9 beta-(1,2)-glucan production associated transmembrane protein compare
SMc00302 -0.9 -1.7 hypothetical protein compare
SMc02983 -0.9 -3.0 ornithine, DAP, or arginine decarboxylase compare
SMc02503 -0.9 -4.2 hypothetical protein compare
SMc03006 -0.9 -0.9 chemotaxis regulator protein compare
SMa1240 -0.9 -1.0 NapF ferredoxin component of periplasmic nitrate reductase compare
SMc00189 -0.9 -2.2 cytochrome C1 protein compare
SMc00791 -0.9 -1.2 hypothetical protein compare
SMc02361 -0.9 -3.7 cytochrome C-type biogenesis transmembrane protein compare
SM_b20293 -0.9 -1.2 hypothetical protein compare
SM_b21454 -0.9 -1.1 hypothetical protein compare
SMc00177 -0.9 -2.9 hypothetical protein compare
SMc04242 -0.9 -0.7 zinc uptake regulation protein compare
SMc00976 -0.9 -2.4 enoyl-CoA hydratase compare
SMc01360 -0.9 -0.6 aspartate carbamoyltransferase catalytic subunit compare
SMc02046 -0.8 -1.0 hypothetical protein compare
SMa5031 -0.8 -0.7 hypothetical protein compare
SMc02897 -0.8 -1.1 cytochrome C transmembrane protein compare
SMc04384 -0.8 -3.9 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
SMa0805 -0.8 -1.6 GabD4 succinate-semialdehyde dehdyrogenase compare
SMc04003 -0.8 -1.3 50S ribosomal protein L36 compare
SMc01578 -0.8 -5.2 aspartate aminotransferase compare
SMc03157 -0.8 -4.1 outer membrane lipoprotein transmembrane compare
SMc00494 -0.8 -1.5 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc01471 -0.8 -1.6 cytochrome C oxidase assembly factor transmembrane protein compare
SMc02640 -0.8 -1.1 UDP-glucuronic acid epimerase compare
SMa2151 -0.8 -1.5 DNA-binding protein compare
SMc02055 -0.8 -0.9 phytoene synthase compare
SMc03930 -0.8 -1.0 sarcosine oxidase subunit gamma compare
SMa0312 -0.8 -2.0 hypothetical protein compare
SMc02504 -0.8 -3.5 transcriptional regulator compare
SMc03091 -0.8 -1.9 arginase compare
SMc01112 -0.8 -3.1 hypothetical protein compare
SMc02833 -0.8 -0.8 penicillin-insensitive murein endopeptidase compare
SMc04221 -0.8 -1.5 hypothetical protein compare
SMc03996 -0.8 -1.8 thiamine-phosphate pyrophosphorylase compare
SMc01556 -0.8 -1.7 hypothetical protein compare
SMc02909 -0.8 -1.0 transglycosylase transmembrane protein compare
SMc00320 -0.7 -3.8 ribosome-binding factor A compare
SMc02312 -0.7 -1.5 zinc-binding protein compare
SM_b21174 -0.7 -1.4 phosphate uptake ABC transporter permease compare
SMc00554 -0.7 -3.5 amidophosphoribosyltransferase compare
SM_b21084 -0.7 -1.1 hypothetical protein compare
SMc02908 -0.7 -2.7 recombination protein RecR compare
SM_b21177 -0.7 -2.8 phosphate uptake ABC transporter ATP-binding protein compare
SMc00495 -0.7 -2.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SM_b20303 -0.7 -1.8 hypothetical protein compare
SMc04383 -0.7 -2.1 putative hydrolase, required for lysine catabolism (from data) compare
SM_b21494 -0.7 -3.3 ornithine cyclodeaminase compare
SM_b21421 -0.7 -2.1 sugar uptake ABC transporter substrate-binding protein precursor compare
SMa5033 -0.7 -0.8 hypothetical protein compare
SMc00712 -0.7 -1.3 hypothetical protein compare
SMc00427 -0.7 -1.2 peptide chain release factor RF-3 protein compare
SMc02155 -0.7 -4.7 hypothetical protein compare
SMc02639 -0.7 -1.3 transcriptional regulator compare
SMc03941 -0.7 -1.5 hypothetical protein compare
SM_b21493 -0.7 -2.1 AsnC family transcriptional regulator compare
SMc00511 -0.7 -2.1 D-ribulose-5-phosphate 3-epimerase compare
SMc01208 -0.7 -0.8 peptidyl-prolyl cis-trans isomerase B protein compare
SM_b20387 -0.7 -0.5 transcriptional regulator compare
SMc02287 -0.7 -0.8 DNA-invertase compare
SMa1585 -0.7 -1.9 hypothetical protein compare
SMa1770 -0.7 -0.9 hypothetical protein compare
SMc00132 -0.6 -2.0 hypothetical protein compare
SMc01427 -0.6 -0.5 hypothetical protein compare
SMc03227 -0.6 -2.1 hypothetical protein compare
SMc01770 -0.6 -1.5 serine hydroxymethyltransferase compare
SMc01259 -0.6 -1.7 hypothetical protein compare
SM_b20411 -0.6 -1.5 hypothetical protein compare
SMc00556 -0.6 -2.1 DNA repair protein RadA compare
SMc02071 -0.6 -1.8 hydrolase glycosidase compare
SMc00489 -0.6 -1.5 hypothetical protein compare
SMc02737 -0.6 -1.8 glycine betaine-binding ABC transporter protein compare
SMa0776 -0.6 -0.7 TRm23b IS ATP-binding protein compare
SMc01099 -0.6 -1.2 tRNA pseudouridine synthase A compare
SMc03279 -0.6 -1.1 transposase number 2 for insertion sequence ISRM28 compare
SMc00229 -0.6 -1.9 hypothetical protein compare
SMc01608 -0.6 -2.4 ABC transporter ATP-binding protein compare
SMc04016 -0.6 -3.1 homospermidine synthase compare
SMc02856 -0.6 -3.2 penicillin-binding protein compare
SM_b20806 -0.6 -1.9 hypothetical protein compare
SMa1597 -0.6 -1.1 Pilus assembly chaperone compare
SMc01440 -0.6 -1.6 hydrolase serine protease transmembrane protein compare
SMc02052 -0.6 -0.2 hypothetical protein compare
SMc02941 -0.6 -1.9 hypothetical protein compare
SMc03834 -0.6 -0.8 pterin-4-alpha-carbinolamine dehydratase compare
SMa0734 -0.6 -0.9 hypothetical protein compare
SMc00615 -0.6 -3.3 phosphoribosylaminoimidazole synthetase compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in stress experiments

For stress 1-octen-3-ol across organisms