Experiment set19S223 for Sinorhizobium meliloti 1021

Compare to:

LB with 1-octen-3-ol 0.5427293333 mM

200 most important genes:

  gene name fitness t score description  
SMc00236 -5.1 -3.5 Indole-3-glycerol phosphate synthase compare
SMc02766 -5.0 -13.8 tryptophan synthase subunit beta compare
SMc02767 -4.7 -8.4 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02725 -4.6 -11.6 anthranilate synthase compare
SMc00235 -4.6 -4.5 anthranilate phosphoribosyltransferase compare
SMa1635 -4.6 -2.2 hypothetical protein compare
SMc02765 -3.9 -11.2 tryptophan synthase subunit alpha compare
SMa0846 -3.1 -1.4 transposase, fragment compare
SMc03184 -3.0 -1.8 PH adaptation potassium efflux system G transmembrane protein compare
SMc02897 -2.4 -2.2 cytochrome C transmembrane protein compare
SMc00982 -2.3 -2.2 dioxygenase compare
SMa0734 -2.3 -2.4 hypothetical protein compare
SMc03935 -2.3 -4.9 hypothetical protein compare
SMc02245 -2.3 -1.5 dihydroorotate dehydrogenase 2 compare
SMc04085 -2.1 -1.5 hypothetical protein compare
SMc02909 -2.1 -2.4 transglycosylase transmembrane protein compare
SMa1174 -2.0 -1.9 hypothetical protein compare
SMc04244 -2.0 -4.0 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMc03900 -2.0 -7.8 cyclic beta-1,2-glucan ABc transporter compare
SMa1921 -1.9 -2.5 hypothetical protein compare
SMc03863 -1.9 -2.4 50S ribosomal protein L19 compare
SMc02107 -1.9 -1.5 hypothetical protein compare
SMc00963 -1.9 -1.2 hypothetical protein compare
SMc02362 -1.8 -1.7 cytochrome c-type biogenesis protein CcmE compare
SMc02858 -1.8 -0.8 chaperone protein DnaJ compare
SMc04243 -1.8 -4.4 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc04003 -1.8 -2.5 50S ribosomal protein L36 compare
SMc01800 -1.8 -1.6 cytochrome C oxidase assembly transmembrane protein compare
SMc04245 -1.8 -7.3 high-affinity zinc uptake system ABC transporter protein compare
SMc03069 -1.8 -2.3 6-phosphogluconolactonase compare
SMc00981 -1.8 -3.5 ferredoxin protein compare
SMc01595 -1.7 -1.7 sensor histidine kinase transmembrane protein compare
SMa0878 -1.7 -2.3 glucosamine--fructose-6-phosphate aminotransferase compare
SMc03127 -1.7 -2.3 ABC transporter permease compare
SMc02755 -1.7 -5.3 S-adenosyl-L-homocysteine hydrolase compare
SMc00010 -1.7 -1.6 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc00427 -1.7 -1.9 peptide chain release factor RF-3 protein compare
SMc03182 -1.7 -5.4 pH adaptation potassium efflux system E transmembrane protein compare
SMc02561 -1.7 -2.0 hypothetical protein compare
SMc03181 -1.7 -8.5 monovalent cation/H+ antiporter subunit D compare
SMc03967 -1.6 -1.0 Holliday junction resolvase compare
SMc04385 -1.5 -3.3 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc02850 -1.5 -2.8 DNA polymerase I compare
SMc01206 -1.5 -1.6 queuine tRNA-ribosyltransferase compare
SMa1073 -1.5 -1.2 TRm23b IS ATP-binding protein compare
SMc02697 -1.5 -1.9 hypothetical protein compare
SMa0431 -1.5 -1.5 hypothetical protein compare
SMc02077 -1.5 -2.7 exodeoxyribonuclease III protein compare
SMc00576 -1.5 -2.5 hypothetical protein compare
SMc03183 -1.5 -5.0 monovalent cation/H+ antiporter subunit F compare
SMc03763 -1.5 -1.4 cytosine-specific methyltransferase compare
SMc03850 -1.5 -0.8 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc00189 -1.5 -4.3 cytochrome C1 protein compare
SMc01124 -1.5 -8.1 PII uridylyl-transferase compare
SMc03179 -1.4 -8.4 monovalent cation/H+ antiporter subunit A compare
SMc02238 -1.4 -1.1 hypothetical protein compare
SMc01183 -1.4 -1.1 LexA repressor compare
SMc00012 -1.4 -2.0 cytochrome C oxidase assembly protein compare
SMc01441 -1.4 -2.4 membrane bound protease compare
SMc04327 -1.4 -0.9 hypothetical protein compare
SMc03180 -1.4 -3.7 monovalent cation/H+ antiporter subunit C compare
SM_b20293 -1.4 -1.1 hypothetical protein compare
SM_b22001 -1.4 -1.8 hypothetical protein compare
SMc00450 -1.4 -0.9 protoheme IX farnesyltransferase compare
SMc00876 -1.3 -3.0 ATP-binding MRP protein compare
SMc02985 -1.3 -0.9 hypothetical protein compare
SMc00293 -1.3 -5.1 homoserine dehydrogenase compare
SMc00412 -1.3 -0.9 orotidine 5'-phosphate decarboxylase compare
SMc00349 -1.3 -4.6 GTP-binding protein LepA compare
SMc02695 -1.3 -3.2 GTP-dependent nucleic acid-binding protein EngD compare
SMc04330 -1.3 -0.9 trimethylamine methyltransferase compare
SMc04242 -1.3 -0.9 zinc uptake regulation protein compare
SM_b20810 -1.3 -4.4 membrane-located cell surface saccharide acetylase compare
SMc04005 -1.3 -6.0 pyruvate kinase compare
SMc02659 -1.2 -3.5 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc00419 -1.2 -2.3 glutathione synthetase compare
SMc01826 -1.2 -2.9 ABC transporter permease compare
SMc03070 -1.2 -2.1 glucose-6-phosphate 1-dehydrogenase compare
SMc05020 -1.2 -2.1 entericidin A precursor compare
SMc01769 -1.2 -6.4 hypothetical protein compare
SMc02558 -1.2 -3.0 hypothetical protein compare
SMc00514 -1.2 -2.6 monooxygenase compare
SMc01119 -1.2 -1.1 hypothetical protein compare
SMa1099 -1.1 -2.1 CycB1 cytochrome c-552 precursor compare
SMc02166 -1.1 -2.9 dihydroorotase compare
SMc00800 -1.1 -1.6 hypothetical protein compare
SM_b21173 -1.1 -0.9 hypothetical protein compare
SMc03159 -1.1 -2.1 ABC transporter ATP-binding protein compare
SMc00647 -1.1 -3.5 ribosomal large subunit pseudouridine synthase compare
SMc01242 -1.0 -2.1 signal peptide protein compare
SM_b20452 -1.0 -1.6 hypothetical protein compare
SMc00712 -1.0 -1.3 hypothetical protein compare
SMc02115 -1.0 -0.4 hypothetical protein compare
SMc04454 -1.0 -3.3 ABC transporter ATP-binding protein compare
SMc01147 -1.0 -1.4 coproporphyrinogen III oxidase compare
SMc04382 -1.0 -8.2 beta-(1,2)-glucan production associated transmembrane protein compare
SMc00914 -1.0 -1.7 oxidoreductase compare
SMc01472 -1.0 -1.0 50S ribosomal protein L11 methyltransferase compare
SMc01850 -1.0 -1.1 hypothetical protein compare
SMc00013 -1.0 -1.2 cytochrome C oxidase subunit III transmembrane protein compare
SMc00188 -1.0 -3.8 cytochrome B transmembrane protein compare
SM_b20955 -1.0 -1.4 endo-beta-1,3-1,4-glycanase compare
SMc00458 -1.0 -5.2 transcriptional regulator compare
SMa2289 -1.0 -1.3 hypothetical protein compare
SMc03153 -0.9 -1.9 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc02520 -0.9 -0.9 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc00580 -0.9 -1.7 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc03008 -0.9 -1.2 chemotaxis protein compare
SMc01440 -0.9 -2.7 hydrolase serine protease transmembrane protein compare
SMc01877 -0.9 -3.8 DNA repair protein compare
SMc03157 -0.9 -5.3 outer membrane lipoprotein transmembrane compare
SMa1063 -0.9 -2.3 hypothetical protein compare
SMc03158 -0.9 -2.3 ABC transporter permease compare
SMc02503 -0.9 -5.2 hypothetical protein compare
SMc02983 -0.9 -2.8 ornithine, DAP, or arginine decarboxylase compare
SM_b20026 -0.9 -1.0 hypothetical protein compare
SMc04383 -0.9 -2.1 putative hydrolase, required for lysine catabolism (from data) compare
SMc01041 -0.9 -1.3 NIFR3-like protein compare
SMc00622 -0.9 -3.9 ribonuclease D protein compare
SMc04121 -0.9 -1.2 uracil phosphoribosyltransferase compare
SMc00239 -0.9 -0.9 hypothetical protein compare
SMc00565 -0.9 -1.4 50S ribosomal protein L9 compare
SMa1697 -0.9 -0.7 hypothetical protein compare
SMc04384 -0.8 -3.6 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
SMc02234 -0.8 -1.0 hypothetical protein compare
SMc02144 -0.8 -0.8 phosphate ABC transporter permease compare
SMc02055 -0.8 -0.9 phytoene synthase compare
SM_b20400 -0.8 -1.9 hypothetical protein compare
SMc02833 -0.8 -0.9 penicillin-insensitive murein endopeptidase compare
SMc01089 -0.8 -1.1 hypothetical protein compare
SMc03996 -0.8 -2.4 thiamine-phosphate pyrophosphorylase compare
SMc00689 -0.8 -2.8 lipoprotein compare
SMc01933 -0.8 -1.3 hypothetical protein compare
SMa5007 -0.8 -3.4 transcriptional regulator compare
SMc03046 -0.8 -2.8 transcriptional regulator compare
SMc00177 -0.8 -3.1 hypothetical protein compare
SMc02149 -0.8 -1.0 hypothetical protein compare
SMc00175 -0.8 -3.3 ABC transporter ATP-binding protein compare
SMa5033 -0.8 -0.9 hypothetical protein compare
SMc00495 -0.8 -2.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc02112 -0.8 -3.2 hypothetical protein compare
SM_b20806 -0.8 -2.8 hypothetical protein compare
SMc02856 -0.8 -4.1 penicillin-binding protein compare
SMc04296 -0.8 -0.7 cell division protein FtsZ compare
SMc01342 -0.8 -1.9 hypothetical protein compare
SMc01036 -0.8 -1.3 hypothetical protein compare
SMc01208 -0.8 -0.7 peptidyl-prolyl cis-trans isomerase B protein compare
SM_b21004 -0.8 -2.5 hypothetical protein compare
SMc02165 -0.8 -1.4 orotate phosphoribosyltransferase compare
SMc02716 -0.7 -2.5 hypothetical protein compare
SM_b20307 -0.7 -0.9 dihydroxyacetone kinase compare
SMa0740 -0.7 -0.8 hypothetical protein compare
SMc01578 -0.7 -4.1 aspartate aminotransferase compare
SMc03227 -0.7 -2.6 hypothetical protein compare
SMc01091 -0.7 -1.3 hypothetical protein compare
SMc00174 -0.7 -3.3 hypothetical protein compare
SMc02287 -0.7 -1.3 DNA-invertase compare
SMa5023 -0.7 -1.5 hypothetical protein compare
SMa0149 -0.7 -1.9 transcription elongation factor regulatory protein compare
SMc03002 -0.7 -2.2 hypothetical protein compare
SMa1894 -0.7 -1.7 methionine sulfoxide reductase B compare
SM_b21182 -0.7 -3.2 hypothetical protein compare
SMc01942 -0.7 -1.8 urease accessory protein compare
SM_b22005 -0.7 -0.9 hypothetical protein compare
SM_b20547 -0.7 -1.6 hypothetical protein compare
SMc00347 -0.7 -1.9 nucleoside diphosphate kinase regulator compare
SMc04239 -0.7 -1.1 hypothetical protein compare
SMa2215 -0.7 -2.3 GntR family transcriptional regulator compare
SMc00493 -0.7 -2.2 phosphoribosylformylglycinamidine synthase I compare
SMc01931 -0.7 -2.4 hypothetical protein compare
SM_b20021 -0.7 -0.8 transcriptional regulator compare
SMc00320 -0.6 -3.0 ribosome-binding factor A compare
SMc00378 -0.6 -2.0 exodeoxyribonuclease VII large subunit compare
SMa0677 -0.6 -2.5 ABC transporter substrate-binding protein compare
SMc00821 -0.6 -0.5 hypothetical protein compare
SM_b20303 -0.6 -1.9 hypothetical protein compare
SMa1050 -0.6 -1.8 hypothetical protein compare
SMc01553 -0.6 -1.8 acyl carrier protein compare
SMc03748 -0.6 -3.5 hypothetical protein compare
SM_b21633 -0.6 -1.0 enoyl-CoA hydratase compare
SMc00187 -0.6 -1.1 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SM_b20270 -0.6 -1.5 proline racemase compare
SMa0771 -0.6 -0.9 hypothetical protein compare
SMa0775 -0.6 -1.8 hypothetical protein compare
SMc02407 -0.6 -2.0 hypothetical protein compare
SMc02640 -0.6 -1.0 UDP-glucuronic acid epimerase compare
SMc01112 -0.6 -2.4 hypothetical protein compare
SMc02276 -0.6 -2.7 nicotinate phosphoribosyltransferase compare
SMc00009 -0.6 -2.9 cytochrome C oxidase subunit II protein compare
SMa0417 -0.6 -1.4 hypothetical protein compare
SMa1136 -0.6 -1.3 hypothetical protein compare
SMc03833 -0.6 -1.6 hypothetical protein compare
SMa0281 -0.6 -1.6 MerR family transcriptional regulator compare
SM_b21494 -0.6 -2.9 ornithine cyclodeaminase compare
SM_b20880 -0.6 -2.3 ATP-dependent RNA helicase compare
SMc03242 -0.6 -1.2 GTP-binding protein compare
SM_b20089 -0.6 -1.9 hypothetical protein compare
SM_b21523 -0.6 -1.4 cell division inhibitor protein compare
SMc00691 -0.6 -1.6 site-specific tyrosine recombinase XerD compare
SMc00554 -0.6 -2.7 amidophosphoribosyltransferase compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in stress experiments

For stress 1-octen-3-ol across organisms