Experiment set19S221 for Sinorhizobium meliloti 1021

Compare to:

LB with 1-octen-3-ol 0.5427293333 mM

200 most detrimental genes:

  gene name fitness t score description  
SMc04224 +1.4 2.7 hypothetical protein compare
SMc00053 +1.1 1.4 monovalent cation/H+ antiporter subunit C compare
SMa0874 +1.0 2.3 NodN dehydratase compare
SMc02121 +0.9 2.1 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SMa1240 +0.9 1.6 NapF ferredoxin component of periplasmic nitrate reductase compare
SMc02713 +0.9 2.0 RNA polymerase sigma-E factor (sigma-24) protein compare
SM_b20387 +0.9 1.4 transcriptional regulator compare
SMa1002 +0.9 1.4 hypothetical protein compare
SMc00191 +0.9 2.0 hypothetical protein compare
SMc00650 +0.9 1.5 hypothetical protein compare
SM_b20953 +0.9 1.3 hypothetical protein compare
SMa1570 +0.9 1.9 PilA2 pilus assembly protein compare
SMc02544 +0.8 1.0 hypothetical protein compare
SM_b22023 +0.8 0.9 molecular chaperone GroES compare
SMc00496 +0.8 1.8 hypothetical protein compare
SMc02373 +0.8 1.0 hypothetical protein compare
SM_b22005 +0.8 1.5 hypothetical protein compare
SMc02338 +0.8 2.1 periplasmic binding ABC transporter protein compare
SM_b21591 +0.7 2.1 GntR family transcriptional regulator compare
SMc00352 +0.7 1.4 acetyltransferase compare
SMc01831 +0.7 1.5 urease accessory protein compare
SMc03249 +0.7 2.3 hypothetical protein compare
SMa0933 +0.7 2.3 TraC conjugal transfer protein compare
SMc01097 +0.7 2.3 hypothetical protein compare
SMc00605 +0.7 1.9 hypothetical protein compare
SMa0674 +0.7 0.8 hypothetical protein compare
SMc02036 +0.7 2.0 transcriptional regulator compare
SMc02046 +0.7 1.5 hypothetical protein compare
SMa0166 +0.7 2.1 hypothetical protein compare
SMc03072 +0.7 2.2 hypothetical protein compare
SMc00619 +0.7 1.1 hypothetical protein compare
SMc02683 +0.6 1.2 hypothetical protein compare
SMa1545 +0.6 2.5 NuoJ2 NADH:quinone oxidoreductase subunit 6 (chain J) compare
SM_b20691 +0.6 1.7 hypothetical protein compare
SMa1245 +0.6 1.6 Crp/fnr-like transcriptional regulator compare
SMc02858 +0.6 0.4 chaperone protein DnaJ compare
SMa5010 +0.6 1.0 hypothetical protein compare
SMa0659 +0.6 1.6 cytochrome c binding protein, carboxyl terminus compare
SMa0882 +0.6 1.2 hypothetical protein compare
SMa0518 +0.6 2.5 hypothetical protein compare
SMa0940 +0.6 2.6 Response regulator compare
SM_b21084 +0.6 1.3 hypothetical protein compare
SMc03279 +0.6 0.7 transposase number 2 for insertion sequence ISRM28 compare
SMa0992 +0.6 1.6 hypothetical protein compare
SMa1053 +0.6 1.5 hypothetical protein compare
SMc04866 +0.6 1.0 hypothetical protein compare
SMc04259 +0.6 2.6 ABC transporter for D-Cellobiose and D-Salicin, periplasmic substrate-binding protein (from data) compare
SMc00959 +0.6 1.2 hypothetical protein compare
SMa1319 +0.6 2.2 VirB2 type IV secretion protein compare
SMc04344 +0.6 1.4 signal peptide protein compare
SMc03979 +0.6 1.3 glyceraldehyde-3-phosphate dehydrogenase compare
SMa0771 +0.6 1.0 hypothetical protein compare
SMa0265 +0.6 1.4 dehydrogenase compare
SMc02378 +0.6 3.4 periplasmic binding transmembrane protein compare
SM_b21408 +0.6 1.1 LysR family transcriptional regulator compare
SMa1625 +0.5 0.9 LysR family transcriptional regulator compare
SM_b21115 +0.5 1.3 response regulator protein compare
SMa0647 +0.5 1.8 hypothetical protein compare
SMc02727 +0.5 1.7 hypothetical protein compare
SM_b20828 +0.5 2.3 hypothetical protein compare
SM_b20403 +0.5 1.7 oxidoreductase subunit protein compare
SMa0787 +0.5 2.6 transposase, fragment compare
SMa0093 +0.5 1.7 Branched-chain amino acid aminotransferase compare
SMc02649 +0.5 1.9 arsenate reductase compare
SM_b21173 +0.5 0.5 hypothetical protein compare
SMc00521 +0.5 1.7 hypothetical protein compare
SMc02451 +0.5 0.6 hypothetical protein compare
SMc04040 +0.5 1.7 heat shock protein compare
SM_b20018 +0.5 2.3 sugar ABC transporter substrate-binding protein compare
SM_b20873 +0.5 1.8 ureidoglycolate hydrolase compare
SMc02164 +0.5 1.7 fructokinase compare
SMa2315 +0.5 1.9 hypothetical protein compare
SM_b21642 +0.5 2.0 hypothetical protein compare
SMa1564 +0.5 2.3 Pilus assembly protein compare
SMa0325 +0.5 1.6 hypothetical protein compare
SM_b22004 +0.5 2.2 plasmid stabilization system protein compare
SMc04051 +0.5 1.3 RNA polymerase sigma-E factor (sigma-24) protein compare
SM_b20414 +0.5 1.0 hypothetical protein compare
SM_b21569 +0.5 1.2 transcriptional regulator compare
SMa0748 +0.5 0.8 MucR family transcriptional regulator compare
SMc02071 +0.5 1.2 hydrolase glycosidase compare
SMa1456 +0.5 2.0 hypothetical protein compare
SMc04462 +0.5 1.8 glycerate dehydrogenase compare
SM_b20307 +0.5 0.7 dihydroxyacetone kinase compare
SM_b20075 +0.5 1.3 hypothetical protein compare
SMc02615 +0.5 1.5 signal peptide protein compare
SM_b20987 +0.5 1.8 siroheme synthase compare
SM_b21398 +0.5 0.7 hypothetical protein compare
SMc03281 +0.5 2.8 transposase compare
SMc02799 +0.5 0.8 16S rRNA methyltransferase GidB compare
SMa1945 +0.5 2.4 hypothetical protein compare
SMc02572 +0.5 1.9 imidazole glycerol phosphate synthase subunit HisH compare
SMc00698 +0.5 1.7 transcriptional regulator compare
SMc00045 +0.5 1.3 cytochrome C signal peptide protein compare
SMc03871 +0.5 1.6 ABC transporter ATP-binding protein compare
SM_b21259 +0.5 2.9 hypothetical protein compare
SMa1210 +0.5 1.7 nitrogen fixation protein FixH compare
SMa1589 +0.5 2.3 hypothetical protein compare
SM_b20448 +0.5 1.7 hypothetical protein compare
SM_b20293 +0.5 0.6 hypothetical protein compare
SMa0543 +0.5 0.7 hypothetical protein compare
SMc01523 +0.4 1.4 methyl viologen/ethidium resistance transmembrane protein compare
SM_b21359 +0.4 1.6 LysR family transcriptional regulator compare
SMc01502 +0.4 1.8 hydrolase phosphatase compare
SMa0340 +0.4 2.0 TrpR binding protein WrbA compare
SM_b20275 +0.4 2.2 hypothetical protein compare
SMa1933 +0.4 1.8 LysR family transcriptional regulator compare
SMa0391 +0.4 2.5 ABC transporter ATP-binding protein compare
SMc03930 +0.4 0.7 sarcosine oxidase subunit gamma compare
SM_b20255 +0.4 1.9 hypothetical protein compare
SMc02231 +0.4 1.7 hypothetical protein compare
SMc02690 +0.4 1.9 hypothetical protein compare
SMc01522 +0.4 1.1 hypothetical protein compare
SMc02642 +0.4 2.4 signal peptide protein compare
SMc04319 +0.4 1.1 hypothetical protein compare
SMc01424 +0.4 0.9 nitrile hydratase subunit alpha protein compare
SM_b20874 +0.4 1.6 hypothetical protein compare
SMa1973 +0.4 1.3 hypothetical protein compare
SM_b20665 +0.4 1.8 partial transposase of insertion sequence ISRm17 protein compare
SMc02656 +0.4 1.6 hypothetical protein compare
SMa0190 +0.4 1.3 transcriptional regulator compare
SMc01842 +0.4 0.9 methyltransferase transcription regulator protein compare
SM_b20364 +0.4 1.7 iron ABC transporter permease compare
SM_b21036 +0.4 1.8 hypothetical protein compare
SM_b20081 +0.4 1.1 hypothetical protein compare
SMc01939 +0.4 0.8 urease subunit beta compare
SMa0961 +0.4 1.7 Response regulator compare
SM_b20347 +0.4 1.8 transcriptional regulator compare
SMa0714 +0.4 1.6 ABC transporter ATP-binding protein compare
SM_b21003 +0.4 2.0 oxidoreductase compare
SM_b20129 +0.4 2.5 transcriptional regulator compare
SMa0164 +0.4 1.8 hypothetical protein compare
SMa5031 +0.4 0.5 hypothetical protein compare
SMc03134 +0.4 1.6 hypothetical protein compare
SMc03022 +0.4 2.4 flagellar motor protein MotA compare
SM_b20221 +0.4 1.8 epoxide hydrolase compare
SM_b21485 +0.4 1.7 hypothetical protein compare
SMa1400 +0.4 1.2 acyl-CoA dehydrogenase compare
SMc00656 +0.4 1.1 hypothetical protein compare
SM_b20145 +0.4 1.6 hypothetical protein compare
SMc03016 +0.4 2.3 transcriptional regulator compare
SMc02354 +0.4 1.8 hypothetical protein compare
SMc03780 +0.4 1.3 hypothetical protein compare
SMa1578 +0.4 1.8 CpaA2 pilus assembly protein compare
SMa1822 +0.4 1.2 hypothetical protein compare
SMc01315 +0.4 0.7 hypothetical protein compare
SMc01426 +0.4 2.5 hypothetical protein compare
SMc02879 +0.4 1.6 hypothetical protein compare
SMa1455 +0.4 1.1 hypothetical protein compare
SMc02859 +0.4 1.6 hypothetical protein compare
SMa1808 +0.4 1.2 hypothetical protein compare
SM_b20226 +0.4 0.9 hypothetical protein compare
SMa0621 +0.4 2.1 FixI2 E1-E2 type cation ATPase compare
SM_b21400 +0.4 1.3 hypothetical protein compare
SMc00726 +0.4 0.5 thiol:disulfide interchange redox-active center transmembrane protein compare
SM_b20114 +0.4 1.1 hypothetical protein compare
SM_b20850 +0.4 2.7 L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) (from data) compare
SMc00339 +0.4 3.0 adenylate cyclase compare
SM_b20728 +0.4 0.9 hypothetical protein compare
SM_b21295 +0.4 1.5 Hsp20 family heat-shock protein compare
SMa0833 +0.4 0.6 hypothetical protein compare
SM_b20268 +0.4 1.8 hydroxyproline-2-epimerase compare
SMa0606 +0.4 2.1 hypothetical protein compare
SMa0760 +0.4 0.8 FixT2 anti-kinase compare
SMc01644 +0.4 1.3 ABC transporter permease compare
SMc01132 +0.4 1.2 hypothetical protein compare
SMc03066 +0.4 0.4 hypothetical protein compare
SM_b20498 +0.4 1.5 hypothetical protein compare
SMc01337 +0.4 0.7 hypothetical protein compare
SMc01791 +0.4 2.4 hypothetical protein compare
SM_b20400 +0.4 0.8 hypothetical protein compare
SM_b20021 +0.4 0.6 transcriptional regulator compare
SMa0581 +0.4 1.4 nitrate ABC transporter ATP-binding protein compare
SMc00511 +0.4 1.5 D-ribulose-5-phosphate 3-epimerase compare
SMa0293 +0.4 1.3 hypothetical protein compare
SMc00241 +0.4 0.4 transcriptional regulator compare
SMc03253 +0.4 1.7 L-proline 3-hydroxylase compare
SMc03116 +0.4 2.4 alcohol dehydrogenase compare
SM_b21373 +0.4 1.5 D-tagatose 6-phosphate 4-epimerase [EC:5.1.3.40] (from data) compare
SM_b21125 +0.4 1.7 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) (from data) compare
SM_b20398 +0.4 1.0 hypothetical protein compare
SM_b20570 +0.4 2.1 aliphatic sulfonate ABC transporter substrate-binding protein compare
SMc02724 +0.4 0.6 hypothetical protein compare
SMc01857 +0.4 0.8 cell division protein MraZ compare
SMc03229 +0.4 0.8 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SM_b21476 +0.4 1.5 hypothetical protein compare
SM_b21497 +0.4 1.5 acriflavin resistance protein compare
SMc00703 +0.4 1.6 hypothetical protein compare
SM_b20383 +0.4 1.7 ABC transporter substrate-binding protein compare
SM_b20357 +0.4 1.5 histidine kinase compare
SMa2317 +0.4 1.3 hypothetical protein compare
SMc04357 +0.3 1.0 hypothetical protein compare
SMc02591 +0.3 1.8 hypothetical protein compare
SMa0886 +0.3 0.6 hypothetical protein compare
SMa1365 +0.3 0.4 ATP-binding protein compare
SMc01149 +0.3 1.7 hypothetical protein compare
SMa1715 +0.3 2.1 AdeC3 adenine deaminase compare
SMc03826 +0.3 0.8 argininosuccinate synthase compare
SMc00498 +0.3 1.6 transmembrane protein compare
SM_b20962 +0.3 0.7 phoshomethylpyrimidine kinase compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in stress experiments

For stress 1-octen-3-ol across organisms