Experiment set19S219 for Sinorhizobium meliloti 1021

Compare to:

LB with 1-octen-3-ol 0.6030326667 mM

200 most important genes:

  gene name fitness t score description  
SMc02766 -5.0 -13.0 tryptophan synthase subunit beta compare
SMc02767 -5.0 -8.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02725 -4.8 -11.6 anthranilate synthase compare
SMa1635 -4.5 -2.2 hypothetical protein compare
SMc00235 -4.5 -4.4 anthranilate phosphoribosyltransferase compare
SMc02765 -4.2 -12.6 tryptophan synthase subunit alpha compare
SMc00236 -4.1 -3.9 Indole-3-glycerol phosphate synthase compare
SMc04327 -2.9 -1.3 hypothetical protein compare
SMc01242 -2.8 -2.3 signal peptide protein compare
SMc03935 -2.7 -4.5 hypothetical protein compare
SMc00012 -2.7 -1.9 cytochrome C oxidase assembly protein compare
SMa0734 -2.6 -2.2 hypothetical protein compare
SMc02055 -2.5 -1.7 phytoene synthase compare
SM_b20143 -2.3 -1.9 oligopeptide ABC transporter permease compare
SMc04244 -2.2 -4.2 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMc03900 -2.2 -7.9 cyclic beta-1,2-glucan ABc transporter compare
SMc00576 -2.2 -3.3 hypothetical protein compare
SMc03763 -2.1 -1.5 cytosine-specific methyltransferase compare
SMc00492 -2.1 -1.0 hypothetical protein compare
SMa0753 -2.1 -1.0 hypothetical protein compare
SMc00982 -2.0 -2.4 dioxygenase compare
SMc00876 -2.0 -3.8 ATP-binding MRP protein compare
SMc01007 -2.0 -2.3 hypothetical protein compare
SMc02435 -2.0 -1.3 methyltransferase compare
SMc01595 -2.0 -1.3 sensor histidine kinase transmembrane protein compare
SMc01206 -2.0 -1.8 queuine tRNA-ribosyltransferase compare
SM_b21454 -1.9 -1.8 hypothetical protein compare
SMc03182 -1.9 -5.5 pH adaptation potassium efflux system E transmembrane protein compare
SMc00981 -1.9 -3.5 ferredoxin protein compare
SMc04085 -1.9 -1.8 hypothetical protein compare
SMc02245 -1.9 -1.8 dihydroorotate dehydrogenase 2 compare
SMc04242 -1.8 -1.7 zinc uptake regulation protein compare
SM_b20758 -1.8 -2.1 ArsR family transcriptional regulator compare
SMc01836 -1.8 -1.8 hypothetical protein compare
SMc01207 -1.8 -2.2 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc00963 -1.8 -1.2 hypothetical protein compare
SMc02077 -1.7 -2.1 exodeoxyribonuclease III protein compare
SMc00189 -1.7 -4.2 cytochrome C1 protein compare
SMc04385 -1.6 -4.5 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc00010 -1.6 -1.5 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc03967 -1.6 -1.0 Holliday junction resolvase compare
SMc04005 -1.5 -6.3 pyruvate kinase compare
SMc00427 -1.5 -2.0 peptide chain release factor RF-3 protein compare
SMc04245 -1.5 -6.4 high-affinity zinc uptake system ABC transporter protein compare
SMc01765 -1.5 -1.4 hypothetical protein compare
SMc03930 -1.5 -1.5 sarcosine oxidase subunit gamma compare
SMc03850 -1.5 -0.8 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc01280 -1.4 -2.2 protease compare
SMc00293 -1.4 -5.1 homoserine dehydrogenase compare
SMa1101 -1.4 -2.1 hypothetical protein compare
SMc04243 -1.4 -3.7 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc01342 -1.4 -2.8 hypothetical protein compare
SMc02695 -1.4 -3.1 GTP-dependent nucleic acid-binding protein EngD compare
SMc02071 -1.4 -3.0 hydrolase glycosidase compare
SMc01208 -1.4 -1.3 peptidyl-prolyl cis-trans isomerase B protein compare
SMc00188 -1.4 -4.5 cytochrome B transmembrane protein compare
SMc00580 -1.3 -1.9 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc01124 -1.3 -7.2 PII uridylyl-transferase compare
SMa0520 -1.3 -3.2 RpiR family transcriptional regulator compare
SMc02985 -1.3 -0.9 hypothetical protein compare
SM_b20411 -1.3 -3.2 hypothetical protein compare
SMc00450 -1.3 -0.9 protoheme IX farnesyltransferase compare
SMc02561 -1.3 -2.1 hypothetical protein compare
SMc03100 -1.3 -0.9 hypothetical protein compare
SMc00412 -1.3 -0.9 orotidine 5'-phosphate decarboxylase compare
SMc03184 -1.3 -1.5 PH adaptation potassium efflux system G transmembrane protein compare
SMc01568 -1.3 -2.0 hypothetical protein compare
SMc01222 -1.2 -1.8 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc03157 -1.2 -5.8 outer membrane lipoprotein transmembrane compare
SMc03181 -1.2 -6.5 monovalent cation/H+ antiporter subunit D compare
SMc00187 -1.2 -2.7 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc02659 -1.2 -4.4 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc02799 -1.2 -1.0 16S rRNA methyltransferase GidB compare
SMc03179 -1.2 -7.1 monovalent cation/H+ antiporter subunit A compare
SMc01471 -1.1 -2.1 cytochrome C oxidase assembly factor transmembrane protein compare
SMc02165 -1.1 -1.3 orotate phosphoribosyltransferase compare
SMa1174 -1.1 -1.3 hypothetical protein compare
SMa1700 -1.1 -1.0 hypothetical protein compare
SM_b20563 -1.1 -1.6 hypothetical protein compare
SMc00176 -1.1 -3.8 hypothetical protein compare
SMc00648 -1.1 -3.6 hypothetical protein compare
SMc01769 -1.1 -5.9 hypothetical protein compare
SMc02050 -1.1 -1.5 trigger factor compare
SMc02755 -1.1 -3.4 S-adenosyl-L-homocysteine hydrolase compare
SMc02640 -1.1 -1.2 UDP-glucuronic acid epimerase compare
SMa1917 -1.1 -2.1 hypothetical protein compare
SMc02362 -1.0 -1.3 cytochrome c-type biogenesis protein CcmE compare
SMc01800 -1.0 -1.1 cytochrome C oxidase assembly transmembrane protein compare
SMc03180 -1.0 -2.7 monovalent cation/H+ antiporter subunit C compare
SMc00458 -1.0 -5.4 transcriptional regulator compare
SMc01259 -1.0 -1.6 hypothetical protein compare
SMc02520 -1.0 -0.7 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc03996 -1.0 -2.6 thiamine-phosphate pyrophosphorylase compare
SMc02850 -1.0 -1.9 DNA polymerase I compare
SMc01441 -1.0 -1.8 membrane bound protease compare
SMc00419 -1.0 -1.8 glutathione synthetase compare
SMc03183 -1.0 -4.3 monovalent cation/H+ antiporter subunit F compare
SMc03899 -1.0 -1.3 hypothetical protein compare
SMc01850 -1.0 -1.2 hypothetical protein compare
SMc04003 -0.9 -1.3 50S ribosomal protein L36 compare
SMc04382 -0.9 -7.6 beta-(1,2)-glucan production associated transmembrane protein compare
SM_b20810 -0.9 -3.7 membrane-located cell surface saccharide acetylase compare
SMc00494 -0.9 -1.6 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc00823 -0.9 -1.6 hypothetical protein compare
SMc00349 -0.9 -3.5 GTP-binding protein LepA compare
SMa5033 -0.9 -0.9 hypothetical protein compare
SMc01364 -0.9 -0.7 DNA topoisomerase I compare
SM_b20474 -0.9 -1.8 hypothetical protein compare
SMc00496 -0.9 -1.3 hypothetical protein compare
SMa0740 -0.9 -0.9 hypothetical protein compare
SM_b21569 -0.9 -1.5 transcriptional regulator compare
SM_b20580 -0.9 -1.5 LysR family transcriptional regulator compare
SMc02166 -0.9 -2.5 dihydroorotase compare
SMc04383 -0.9 -2.5 putative hydrolase, required for lysine catabolism (from data) compare
SMc00691 -0.9 -2.2 site-specific tyrosine recombinase XerD compare
SMc03158 -0.9 -2.0 ABC transporter permease compare
SMa1666 -0.9 -1.8 hypothetical protein compare
SMc00838 -0.9 -2.9 hypothetical protein compare
SMc02266 -0.9 -0.7 hypothetical protein compare
SMc00555 -0.9 -1.1 colicin V production transmembrane protein compare
SMc04232 -0.9 -1.3 glycine rich transmembrane protein compare
SMc02250 -0.9 -2.0 large-conductance mechanosensitive channel compare
SMc00320 -0.9 -3.3 ribosome-binding factor A compare
SMc03070 -0.9 -1.7 glucose-6-phosphate 1-dehydrogenase compare
SMc03863 -0.8 -1.4 50S ribosomal protein L19 compare
SMc01360 -0.8 -0.5 aspartate carbamoyltransferase catalytic subunit compare
SMc00013 -0.8 -1.3 cytochrome C oxidase subunit III transmembrane protein compare
SMc01931 -0.8 -2.2 hypothetical protein compare
SMa0776 -0.8 -0.9 TRm23b IS ATP-binding protein compare
SMa0861 -0.8 -2.2 transposase, fragment compare
SMa0663 -0.8 -1.8 hypothetical protein compare
SMc00174 -0.8 -3.6 hypothetical protein compare
SMc00132 -0.8 -1.8 hypothetical protein compare
SM_b20148 -0.8 -2.0 transcriptional regulator compare
SMc00602 -0.8 -2.5 excinuclease ABC subunit C compare
SMc04223 -0.8 -1.6 hypothetical protein compare
SMa1063 -0.8 -1.9 hypothetical protein compare
SMa1921 -0.8 -1.1 hypothetical protein compare
SMc02497 -0.8 -2.3 hypothetical protein compare
SMa0267 -0.7 -2.9 GntR family transcriptional regulator compare
SMc02504 -0.7 -3.4 transcriptional regulator compare
SMc01223 -0.7 -1.9 transcriptional regulator compare
SMc01440 -0.7 -2.2 hydrolase serine protease transmembrane protein compare
SMc02719 -0.7 -1.0 transposase compare
SMa1697 -0.7 -0.6 hypothetical protein compare
SMc02631 -0.7 -1.3 hypothetical protein compare
SMa2215 -0.7 -2.4 GntR family transcriptional regulator compare
SM_b21494 -0.7 -3.7 ornithine cyclodeaminase compare
SMc00791 -0.7 -1.6 hypothetical protein compare
SMc04266 -0.7 -2.0 hypothetical protein compare
SMc00556 -0.7 -2.4 DNA repair protein RadA compare
SM_b21049 -0.7 -1.3 hypothetical protein compare
SMc03229 -0.7 -1.3 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMa0775 -0.7 -1.4 hypothetical protein compare
SMc01930 -0.7 -1.6 hypothetical protein compare
SMc02234 -0.7 -0.9 hypothetical protein compare
SMa1160 -0.7 -2.3 hypothetical protein compare
SMc00239 -0.7 -0.8 hypothetical protein compare
SM_b22005 -0.7 -0.9 hypothetical protein compare
SMc03159 -0.7 -1.5 ABC transporter ATP-binding protein compare
SMa1556 -0.7 -3.1 Methyl-accepting chemotaxis protein compare
SM_b20955 -0.7 -1.2 endo-beta-1,3-1,4-glycanase compare
SMc03289 -0.7 -2.0 hypothetical protein compare
SM_b21176 -0.7 -1.9 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc03186 -0.7 -2.1 transcriptional regulator compare
SMc00711 -0.7 -2.8 cyclohexadienyl dehydrogenase compare
SMc01089 -0.7 -1.0 hypothetical protein compare
SM_b21046 -0.7 -2.4 transposase of insertion sequence ISRm10-1, orfB C-terminus protein compare
SMc02361 -0.7 -3.2 cytochrome C-type biogenesis transmembrane protein compare
SMc02691 -0.7 -2.8 membrane transporter compare
SMc00859 -0.7 -1.4 hypothetical protein compare
SMc02112 -0.7 -3.4 hypothetical protein compare
SMc04213 -0.7 -1.4 diacylglycerol kinase compare
SMc00647 -0.7 -2.8 ribosomal large subunit pseudouridine synthase compare
SMc04384 -0.7 -3.8 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
SMc01877 -0.7 -2.6 DNA repair protein compare
SMc03979 -0.7 -1.1 glyceraldehyde-3-phosphate dehydrogenase compare
SMa0052 -0.7 -1.8 hypothetical protein compare
SMc02164 -0.6 -1.4 fructokinase compare
SMa0846 -0.6 -0.5 transposase, fragment compare
SMa1056 -0.6 -1.6 transcriptional regulator compare
SMc02714 -0.6 -0.7 hypothetical protein compare
SMa0810 -0.6 -1.6 nitrogen fixation protein FixU compare
SMa0771 -0.6 -0.8 hypothetical protein compare
SMc03069 -0.6 -1.0 6-phosphogluconolactonase compare
SMa1494 -0.6 -2.2 hypothetical protein compare
SM_b21058 -0.6 -1.5 glucose-1-phosphate cytidylyltransferase compare
SMc00760 -0.6 -1.5 recombinase A compare
SM_b21181 -0.6 -3.2 glutaryl-CoA dehydrogenase compare
SMc00709 -0.6 -2.1 hypothetical protein compare
SMc00565 -0.6 -1.1 50S ribosomal protein L9 compare
SMc02908 -0.6 -2.5 recombination protein RecR compare
SM_b20819 -0.6 -2.8 ferredoxin compare
SMc02260 -0.6 -1.4 ABC transporter ATP-binding protein compare
SMc00880 -0.6 -2.2 oxidoreductase compare
SMc00302 -0.6 -1.2 hypothetical protein compare
SMc01858 -0.6 -0.8 S-adenosyl-methyltransferase MraW compare
SMc03751 -0.6 -1.7 hypothetical protein compare
SMc00944 -0.6 -2.0 hypothetical protein compare
SMc00554 -0.6 -2.7 amidophosphoribosyltransferase compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in stress experiments

For stress 1-octen-3-ol across organisms