Experiment set19S217 for Sinorhizobium meliloti 1021

Compare to:

LB with 1-octen-3-ol 0.6030326667 mM

200 most important genes:

  gene name fitness t score description  
SMc02767 -6.2 -6.0 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02725 -5.0 -10.7 anthranilate synthase compare
SMc02766 -4.6 -15.4 tryptophan synthase subunit beta compare
SMa1635 -4.6 -2.2 hypothetical protein compare
SMc00236 -4.2 -4.0 Indole-3-glycerol phosphate synthase compare
SMc00235 -4.1 -5.6 anthranilate phosphoribosyltransferase compare
SMc02765 -4.1 -11.0 tryptophan synthase subunit alpha compare
SMc00012 -3.4 -3.2 cytochrome C oxidase assembly protein compare
SMa0846 -3.0 -1.4 transposase, fragment compare
SMc04244 -2.7 -4.1 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMc03935 -2.6 -5.3 hypothetical protein compare
SMc02050 -2.6 -2.5 trigger factor compare
SMc04243 -2.3 -4.6 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc03763 -2.2 -1.5 cytosine-specific methyltransferase compare
SMc01242 -2.1 -3.1 signal peptide protein compare
SMc01595 -2.0 -1.4 sensor histidine kinase transmembrane protein compare
SMc03900 -1.9 -8.1 cyclic beta-1,2-glucan ABc transporter compare
SMc02897 -1.9 -2.2 cytochrome C transmembrane protein compare
SMc00329 -1.9 -2.8 iron response regulator protein compare
SMc00963 -1.8 -1.2 hypothetical protein compare
SMc01206 -1.8 -1.3 queuine tRNA-ribosyltransferase compare
SMc00876 -1.8 -3.7 ATP-binding MRP protein compare
SMc04245 -1.7 -7.6 high-affinity zinc uptake system ABC transporter protein compare
SMc01364 -1.7 -1.1 DNA topoisomerase I compare
SMc00427 -1.7 -2.2 peptide chain release factor RF-3 protein compare
SMc00010 -1.7 -1.5 cytochrome C oxidase polypeptide I transmembrane protein compare
SMa0740 -1.6 -1.5 hypothetical protein compare
SMc01472 -1.6 -1.5 50S ribosomal protein L11 methyltransferase compare
SMc00293 -1.6 -5.7 homoserine dehydrogenase compare
SMa0776 -1.5 -1.4 TRm23b IS ATP-binding protein compare
SMc04085 -1.5 -2.0 hypothetical protein compare
SMc02055 -1.5 -1.4 phytoene synthase compare
SMc02245 -1.5 -1.4 dihydroorotate dehydrogenase 2 compare
SMc01441 -1.5 -2.4 membrane bound protease compare
SMc03184 -1.5 -1.3 PH adaptation potassium efflux system G transmembrane protein compare
SMc04385 -1.4 -4.2 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc02362 -1.4 -1.6 cytochrome c-type biogenesis protein CcmE compare
SMc00560 -1.4 -2.6 hypothetical protein compare
SMc00981 -1.4 -3.2 ferredoxin protein compare
SMa5033 -1.4 -1.3 hypothetical protein compare
SMc00355 -1.4 -2.4 hypothetical protein compare
SMc01124 -1.4 -5.7 PII uridylyl-transferase compare
SMc02985 -1.4 -0.9 hypothetical protein compare
SMc02695 -1.4 -3.1 GTP-dependent nucleic acid-binding protein EngD compare
SMc03069 -1.4 -2.0 6-phosphogluconolactonase compare
SMc00450 -1.3 -0.9 protoheme IX farnesyltransferase compare
SMc02850 -1.3 -2.2 DNA polymerase I compare
SMc04327 -1.3 -0.8 hypothetical protein compare
SMc02144 -1.3 -0.9 phosphate ABC transporter permease compare
SMc00174 -1.3 -5.2 hypothetical protein compare
SMc00349 -1.3 -4.2 GTP-binding protein LepA compare
SMc03996 -1.3 -3.4 thiamine-phosphate pyrophosphorylase compare
SMc00189 -1.3 -4.8 cytochrome C1 protein compare
SMc01836 -1.3 -1.6 hypothetical protein compare
SMc03181 -1.3 -5.1 monovalent cation/H+ antiporter subunit D compare
SMc00419 -1.2 -2.4 glutathione synthetase compare
SM_b20313 -1.2 -2.6 glycerone kinase compare
SMa2167 -1.2 -2.9 hypothetical protein compare
SMc03159 -1.2 -2.4 ABC transporter ATP-binding protein compare
SMc01222 -1.2 -1.9 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc00241 -1.2 -2.1 transcriptional regulator compare
SMc04003 -1.2 -2.1 50S ribosomal protein L36 compare
SMc02077 -1.2 -1.8 exodeoxyribonuclease III protein compare
SMc00838 -1.2 -3.7 hypothetical protein compare
SMc00188 -1.2 -4.1 cytochrome B transmembrane protein compare
SMc03127 -1.1 -1.7 ABC transporter permease compare
SM_b21454 -1.1 -1.4 hypothetical protein compare
SM_b20810 -1.1 -4.1 membrane-located cell surface saccharide acetylase compare
SMc03863 -1.1 -1.9 50S ribosomal protein L19 compare
SMc01877 -1.1 -3.8 DNA repair protein compare
SMa0431 -1.1 -1.3 hypothetical protein compare
SMa0674 -1.1 -0.6 hypothetical protein compare
SM_b20711 -1.1 -2.3 hypothetical protein compare
SMc02755 -1.1 -4.3 S-adenosyl-L-homocysteine hydrolase compare
SMc03157 -1.1 -6.8 outer membrane lipoprotein transmembrane compare
SMc02165 -1.1 -1.6 orotate phosphoribosyltransferase compare
SMa1100 -1.1 -1.8 hypothetical protein compare
SMc01769 -1.1 -5.6 hypothetical protein compare
SM_b20021 -1.1 -1.2 transcriptional regulator compare
SMc00495 -1.1 -3.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc00982 -1.1 -1.9 dioxygenase compare
SMc02659 -1.0 -4.1 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc01260 -1.0 -1.7 transcriptional regulator compare
SMc01765 -1.0 -1.1 hypothetical protein compare
SMc04005 -1.0 -4.9 pyruvate kinase compare
SMc03795 -1.0 -0.9 isopropylmalate isomerase small subunit compare
SMc03967 -1.0 -0.8 Holliday junction resolvase compare
SMc02520 -1.0 -0.9 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc03179 -1.0 -5.6 monovalent cation/H+ antiporter subunit A compare
SMc01939 -1.0 -1.1 urease subunit beta compare
SMc02558 -1.0 -3.0 hypothetical protein compare
SMc02115 -1.0 -0.4 hypothetical protein compare
SMc04383 -1.0 -2.7 putative hydrolase, required for lysine catabolism (from data) compare
SMc01800 -1.0 -0.7 cytochrome C oxidase assembly transmembrane protein compare
SMc04382 -1.0 -8.0 beta-(1,2)-glucan production associated transmembrane protein compare
SMc00764 -1.0 -2.4 hypothetical protein compare
SMa1323 -0.9 -1.6 Transcription regulator compare
SMa0748 -0.9 -1.2 MucR family transcriptional regulator compare
SMc02107 -0.9 -1.0 hypothetical protein compare
SMc02561 -0.9 -1.6 hypothetical protein compare
SMc01471 -0.9 -1.8 cytochrome C oxidase assembly factor transmembrane protein compare
SMa1765 -0.9 -1.0 hypothetical protein compare
SMc05020 -0.9 -1.5 entericidin A precursor compare
SMc01178 -0.9 -1.5 multidrug transmembrane resistance signal peptide protein compare
SMc00458 -0.9 -5.1 transcriptional regulator compare
SMc01858 -0.9 -1.2 S-adenosyl-methyltransferase MraW compare
SMc01091 -0.9 -1.2 hypothetical protein compare
SMa0286 -0.9 -1.7 hypothetical protein compare
SMc00691 -0.9 -2.3 site-specific tyrosine recombinase XerD compare
SMc00802 -0.9 -1.2 hypothetical protein compare
SMc00556 -0.9 -2.9 DNA repair protein RadA compare
SMc01183 -0.9 -0.9 LexA repressor compare
SMc03180 -0.9 -3.5 monovalent cation/H+ antiporter subunit C compare
SMc02941 -0.9 -1.7 hypothetical protein compare
SMc03070 -0.9 -1.8 glucose-6-phosphate 1-dehydrogenase compare
SMc04182 -0.9 -1.3 hypothetical protein compare
SMc01845 -0.9 -1.2 transglycosylase transmembrane protein compare
SMc02166 -0.9 -2.5 dihydroorotase compare
SMc03183 -0.9 -3.5 monovalent cation/H+ antiporter subunit F compare
SMc02833 -0.8 -0.9 penicillin-insensitive murein endopeptidase compare
SMc01360 -0.8 -0.6 aspartate carbamoyltransferase catalytic subunit compare
SMa0291 -0.8 -2.1 hypothetical protein compare
SMc00580 -0.8 -1.4 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc03182 -0.8 -2.9 pH adaptation potassium efflux system E transmembrane protein compare
SMc01568 -0.8 -1.3 hypothetical protein compare
SMc02361 -0.8 -2.6 cytochrome C-type biogenesis transmembrane protein compare
SMc03158 -0.8 -2.2 ABC transporter permease compare
SMc02631 -0.8 -1.5 hypothetical protein compare
SMc04220 -0.8 -1.0 transcriptional regulator compare
SMa2053 -0.8 -1.3 MocE-like protein compare
SMc00540 -0.8 -1.3 hypothetical protein compare
SMa0831 -0.8 -2.3 NifX iron-molybdenum cluster-binding protein compare
SMc04001 -0.8 -0.9 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc04008 -0.8 -1.9 hypothetical protein compare
SMc00648 -0.8 -2.6 hypothetical protein compare
SMa0861 -0.8 -2.3 transposase, fragment compare
SMc02504 -0.8 -3.5 transcriptional regulator compare
SMa1200 -0.8 -2.3 hypothetical protein compare
SMc01342 -0.8 -2.0 hypothetical protein compare
SMc00013 -0.8 -1.2 cytochrome C oxidase subunit III transmembrane protein compare
SMc01259 -0.8 -1.9 hypothetical protein compare
SMc01440 -0.8 -2.3 hydrolase serine protease transmembrane protein compare
SM_b21365 -0.8 -1.7 hypothetical protein compare
SMa1658 -0.8 -1.5 hypothetical protein compare
SMc02084 -0.7 -0.6 biopolymer transport transmembrane protein compare
SMc04384 -0.7 -3.9 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
SMc04242 -0.7 -0.7 zinc uptake regulation protein compare
SMc01768 -0.7 -1.8 transcriptional regulator compare
SMc02983 -0.7 -2.5 ornithine, DAP, or arginine decarboxylase compare
SM_b21395 -0.7 -1.0 hypothetical protein compare
SMc02503 -0.7 -4.3 hypothetical protein compare
SMc01147 -0.7 -1.2 coproporphyrinogen III oxidase compare
SMc01099 -0.7 -1.4 tRNA pseudouridine synthase A compare
SMa0112 -0.7 -2.0 hypothetical protein compare
SMc00489 -0.7 -2.3 hypothetical protein compare
SMc00412 -0.7 -0.6 orotidine 5'-phosphate decarboxylase compare
SMc00711 -0.7 -2.9 cyclohexadienyl dehydrogenase compare
SM_b20806 -0.7 -2.9 hypothetical protein compare
SM_b20086 -0.7 -1.4 hypothetical protein compare
SMc00689 -0.7 -2.7 lipoprotein compare
SMa0326 -0.7 -1.4 short chain alcohol dehydrogenase-related dehydrogenase compare
SMa0267 -0.7 -2.8 GntR family transcriptional regulator compare
SMc04088 -0.7 -4.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc02435 -0.7 -0.9 methyltransferase compare
SMa0909 -0.7 -1.7 hypothetical protein compare
SMc00726 -0.7 -0.7 thiol:disulfide interchange redox-active center transmembrane protein compare
SMa1008 -0.7 -1.8 hypothetical protein compare
SMa1398 -0.7 -1.6 3-ketoacyl-ACP reductase compare
SMc02137 -0.7 -3.0 ornithine carbamoyltransferase compare
SMc00821 -0.7 -0.4 hypothetical protein compare
SMc04002 -0.7 -2.0 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMa0448 -0.7 -1.1 hypothetical protein compare
SMc00928 -0.7 -0.8 signal peptide protein compare
SMc00554 -0.7 -3.0 amidophosphoribosyltransferase compare
SMa1413 -0.7 -1.2 hypothetical protein compare
SMc02485 -0.7 -1.5 signal peptide protein compare
SMc02497 -0.6 -1.7 hypothetical protein compare
SMc04428 -0.6 -2.0 hypothetical protein compare
SMc04454 -0.6 -2.4 ABC transporter ATP-binding protein compare
SMc00614 -0.6 -2.9 phosphoribosylglycinamide formyltransferase compare
SMa0834 -0.6 -2.6 FdxB ferredoxin III compare
SM_b20303 -0.6 -2.0 hypothetical protein compare
SMc03776 -0.6 -2.1 gamma-glutamyl kinase compare
SMa1597 -0.6 -1.5 Pilus assembly chaperone compare
SMa1232 -0.6 -2.0 NapC membrane-bound tetraheme cytochrome c subunit compare
SM_b21175 -0.6 -1.3 phosphate uptake ABC transporter permease compare
SMc00647 -0.6 -2.3 ribosomal large subunit pseudouridine synthase compare
SMc01540 -0.6 -1.2 hypothetical protein compare
SMc03053 -0.6 -0.9 flagellar biosynthesis protein FliQ compare
SMc01833 -0.6 -2.1 hypothetical protein compare
SMc00507 -0.6 -1.8 hypothetical protein compare
SMa2091 -0.6 -1.4 hypothetical protein compare
SMc03850 -0.6 -0.5 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SM_b21580 -0.6 -0.6 hypothetical protein compare
SMc02856 -0.6 -3.3 penicillin-binding protein compare
SMc01357 -0.6 -1.6 hypothetical protein compare
SMc04266 -0.6 -1.7 hypothetical protein compare
SMa0520 -0.6 -1.7 RpiR family transcriptional regulator compare
SMc00053 -0.6 -0.5 monovalent cation/H+ antiporter subunit C compare
SM_b21177 -0.6 -2.6 phosphate uptake ABC transporter ATP-binding protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in stress experiments

For stress 1-octen-3-ol across organisms