Experiment set19S215 for Sinorhizobium meliloti 1021

Compare to:

LB with 6-Pentyl-2H-pyran-2-one 0.385649 mM

200 most important genes:

  gene name fitness t score description  
SMc02767 -5.4 -7.4 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02766 -4.7 -13.0 tryptophan synthase subunit beta compare
SMc02725 -4.5 -11.3 anthranilate synthase compare
SMa1635 -4.5 -2.0 hypothetical protein compare
SMc02765 -4.2 -10.6 tryptophan synthase subunit alpha compare
SMc00236 -4.0 -3.9 Indole-3-glycerol phosphate synthase compare
SMc00235 -3.7 -5.0 anthranilate phosphoribosyltransferase compare
SMc01242 -3.2 -2.8 signal peptide protein compare
SMc04385 -3.2 -5.2 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc04005 -3.1 -7.8 pyruvate kinase compare
SMc02077 -3.0 -3.5 exodeoxyribonuclease III protein compare
SMa0846 -2.9 -1.3 transposase, fragment compare
SMc04243 -2.7 -4.1 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc03935 -2.7 -4.7 hypothetical protein compare
SMc01800 -2.6 -1.7 cytochrome C oxidase assembly transmembrane protein compare
SMc03900 -2.5 -7.1 cyclic beta-1,2-glucan ABc transporter compare
SMc02245 -2.1 -1.4 dihydroorotate dehydrogenase 2 compare
SMc00029 -2.1 -2.8 hypothetical protein compare
SMc03763 -2.1 -1.4 cytosine-specific methyltransferase compare
SMc00010 -2.1 -1.4 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc02906 -2.1 -0.9 hypothetical protein compare
SMa0753 -2.1 -0.9 hypothetical protein compare
SMc04085 -2.1 -1.4 hypothetical protein compare
SMc02434 -2.0 -2.4 hypothetical protein compare
SMc01028 -2.0 -10.3 phosphopyruvate hydratase compare
SMc00329 -2.0 -2.7 iron response regulator protein compare
SM_b21266 -2.0 -4.5 hypothetical protein compare
SMc00981 -2.0 -3.7 ferredoxin protein compare
SMc01595 -2.0 -1.3 sensor histidine kinase transmembrane protein compare
SMc03008 -1.9 -1.7 chemotaxis protein compare
SMc01007 -1.9 -2.1 hypothetical protein compare
SMc02238 -1.9 -1.2 hypothetical protein compare
SMc00619 -1.9 -1.3 hypothetical protein compare
SMc04244 -1.8 -3.6 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SM_b21265 -1.8 -8.3 glycosyltransferase compare
SMc00963 -1.8 -1.2 hypothetical protein compare
SMc02833 -1.7 -1.2 penicillin-insensitive murein endopeptidase compare
SM_b21268 -1.7 -7.5 hypothetical protein compare
SMc02858 -1.7 -0.7 chaperone protein DnaJ compare
SMc02362 -1.7 -1.6 cytochrome c-type biogenesis protein CcmE compare
SMa2251 -1.7 -2.7 hypothetical protein compare
SMc04245 -1.7 -6.7 high-affinity zinc uptake system ABC transporter protein compare
SM_b21252 -1.7 -10.9 glycosyltransferase compare
SMc03863 -1.7 -2.1 50S ribosomal protein L19 compare
SMc02838 -1.7 -6.2 phosphoglyceromutase compare
SMc02107 -1.6 -1.2 hypothetical protein compare
SMc00012 -1.6 -2.0 cytochrome C oxidase assembly protein compare
SMc02695 -1.6 -3.3 GTP-dependent nucleic acid-binding protein EngD compare
SMa1697 -1.6 -1.0 hypothetical protein compare
SMc02503 -1.6 -4.7 hypothetical protein compare
SMc02983 -1.6 -3.7 ornithine, DAP, or arginine decarboxylase compare
SMc00189 -1.6 -3.6 cytochrome C1 protein compare
SMc01364 -1.6 -1.0 DNA topoisomerase I compare
SMc01440 -1.6 -3.0 hydrolase serine protease transmembrane protein compare
SMc03180 -1.5 -5.0 monovalent cation/H+ antiporter subunit C compare
SM_b21269 -1.5 -9.1 ABC transporter ATPase compare
SMc03242 -1.5 -2.2 GTP-binding protein compare
SMc00876 -1.5 -3.3 ATP-binding MRP protein compare
SMc00176 -1.5 -4.7 hypothetical protein compare
SM_b21256 -1.5 -7.3 nucleotide sugar oxidase compare
SMc00293 -1.5 -5.1 homoserine dehydrogenase compare
SM_b21264 -1.5 -7.8 hypothetical protein compare
SM_b21253 -1.5 -3.5 hypothetical protein compare
SMc03070 -1.5 -2.4 glucose-6-phosphate 1-dehydrogenase compare
SMc00576 -1.5 -2.5 hypothetical protein compare
SMc02055 -1.5 -1.3 phytoene synthase compare
SMc00821 -1.4 -0.8 hypothetical protein compare
SMc02050 -1.4 -2.1 trigger factor compare
SMc01471 -1.4 -2.3 cytochrome C oxidase assembly factor transmembrane protein compare
SMc00928 -1.4 -1.2 signal peptide protein compare
SMa1639 -1.4 -1.3 hypothetical protein compare
SMc01441 -1.4 -2.0 membrane bound protease compare
SMc00351 -1.4 -1.0 hypothetical protein compare
SMa0776 -1.4 -1.2 TRm23b IS ATP-binding protein compare
SMc01769 -1.4 -6.9 hypothetical protein compare
SMc01315 -1.3 -1.3 hypothetical protein compare
SMc02641 -1.3 -1.5 UDP-glucose 6-dehydrogenase compare
SMc01206 -1.3 -1.3 queuine tRNA-ribosyltransferase compare
SMc03181 -1.3 -5.3 monovalent cation/H+ antiporter subunit D compare
SMa1101 -1.3 -1.8 hypothetical protein compare
SMc02985 -1.3 -0.9 hypothetical protein compare
SMc01183 -1.3 -1.0 LexA repressor compare
SMc00187 -1.3 -3.1 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc00088 -1.3 -1.2 hypothetical protein compare
SMc01836 -1.3 -1.8 hypothetical protein compare
SMc00554 -1.2 -5.2 amidophosphoribosyltransferase compare
SMc01222 -1.2 -1.8 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMa0545 -1.2 -2.3 hypothetical protein compare
SMc00419 -1.2 -2.1 glutathione synthetase compare
SMc00412 -1.2 -0.8 orotidine 5'-phosphate decarboxylase compare
SMc02504 -1.2 -3.2 transcriptional regulator compare
SMc02755 -1.2 -4.1 S-adenosyl-L-homocysteine hydrolase compare
SMa0431 -1.2 -1.2 hypothetical protein compare
SMc03179 -1.2 -6.6 monovalent cation/H+ antiporter subunit A compare
SMc03183 -1.2 -4.4 monovalent cation/H+ antiporter subunit F compare
SMc02714 -1.2 -1.0 hypothetical protein compare
SMc03182 -1.1 -3.8 pH adaptation potassium efflux system E transmembrane protein compare
SMc04441 -1.1 -1.4 hypothetical protein compare
SMc02856 -1.1 -5.7 penicillin-binding protein compare
SMc00711 -1.1 -3.5 cyclohexadienyl dehydrogenase compare
SMc00726 -1.1 -0.9 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc00760 -1.1 -2.5 recombinase A compare
SMc02141 -1.1 -1.0 phosphate transporter PhoU compare
SMc01124 -1.1 -5.7 PII uridylyl-transferase compare
SMc00540 -1.1 -2.4 hypothetical protein compare
SMc02451 -1.1 -1.0 hypothetical protein compare
SMc01207 -1.1 -1.7 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc00648 -1.1 -2.8 hypothetical protein compare
SMc03157 -1.1 -5.9 outer membrane lipoprotein transmembrane compare
SMa1052 -1.0 -1.1 hypothetical protein compare
SMc00349 -1.0 -3.5 GTP-binding protein LepA compare
SMa0861 -1.0 -2.6 transposase, fragment compare
SMa0905 -1.0 -1.3 hypothetical protein compare
SM_b20810 -1.0 -3.7 membrane-located cell surface saccharide acetylase compare
SMc00241 -1.0 -1.4 transcriptional regulator compare
SM_b20307 -1.0 -1.0 dihydroxyacetone kinase compare
SMc02640 -1.0 -1.1 UDP-glucuronic acid epimerase compare
SMc04382 -1.0 -8.2 beta-(1,2)-glucan production associated transmembrane protein compare
SM_b20711 -1.0 -1.9 hypothetical protein compare
SMc01347 -1.0 -1.1 hypothetical protein compare
SMc02435 -1.0 -1.1 methyltransferase compare
SMa0851 -0.9 -1.7 NodH sulfotransferase compare
SMa0326 -0.9 -1.4 short chain alcohol dehydrogenase-related dehydrogenase compare
SMc04003 -0.9 -1.6 50S ribosomal protein L36 compare
SMc02287 -0.9 -1.9 DNA-invertase compare
SMc00174 -0.9 -3.5 hypothetical protein compare
SMc04384 -0.9 -4.9 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
SMc02863 -0.9 -2.1 recombination protein F compare
SMc02861 -0.9 -1.6 phosphate transporter compare
SMc00188 -0.9 -3.2 cytochrome B transmembrane protein compare
SMa5010 -0.9 -0.7 hypothetical protein compare
SMc02165 -0.9 -1.3 orotate phosphoribosyltransferase compare
SMc00320 -0.9 -3.6 ribosome-binding factor A compare
SMa0775 -0.9 -1.6 hypothetical protein compare
SMc01164 -0.9 -3.9 hypothetical protein compare
SMc02659 -0.9 -2.7 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc02778 -0.9 -1.3 hydroxyacid aldolase compare
SMc01613 -0.9 -3.2 ribose-5-phosphate isomerase B compare
SMc02520 -0.9 -0.8 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc00982 -0.9 -1.6 dioxygenase compare
SMc02280 -0.9 -1.1 hypothetical protein compare
SMc01089 -0.9 -1.1 hypothetical protein compare
SMc00838 -0.9 -2.8 hypothetical protein compare
SMc01877 -0.9 -3.6 DNA repair protein compare
SMc04383 -0.9 -2.3 putative hydrolase, required for lysine catabolism (from data) compare
SMc01360 -0.9 -0.6 aspartate carbamoyltransferase catalytic subunit compare
SMc00719 -0.8 -1.5 hypoxanthine-guanine phosphoribosyltransferase compare
SMc04001 -0.8 -0.8 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc02617 -0.8 -2.5 hypothetical protein compare
SM_b20955 -0.8 -1.4 endo-beta-1,3-1,4-glycanase compare
SMc03833 -0.8 -1.8 hypothetical protein compare
SMc00734 -0.8 -4.7 ribonuclease RNase BN (RBN) transmembrane protein compare
SMa0810 -0.8 -1.2 nitrogen fixation protein FixU compare
SMc00853 -0.8 -1.4 hypothetical protein compare
SMc03012 -0.8 -2.6 chemoreceptor glutamine deamidase CheD compare
SMc00425 -0.8 -1.3 transcriptional regulator compare
SMc02361 -0.8 -3.3 cytochrome C-type biogenesis transmembrane protein compare
SMc01853 -0.8 -2.6 hypothetical protein compare
SMc02713 -0.8 -1.1 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc00458 -0.8 -4.2 transcriptional regulator compare
SMc00495 -0.8 -1.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc03028 -0.8 -1.7 flagellar basal body rod protein FlgC compare
SMc00013 -0.8 -1.3 cytochrome C oxidase subunit III transmembrane protein compare
SMa0748 -0.8 -0.9 MucR family transcriptional regulator compare
SMc01568 -0.8 -1.2 hypothetical protein compare
SMa1210 -0.7 -1.1 nitrogen fixation protein FixH compare
SMc02720 -0.7 -2.1 ATP-dependent Clp protease proteolytic subunit compare
SMc01112 -0.7 -3.1 hypothetical protein compare
SMc01768 -0.7 -2.0 transcriptional regulator compare
SMa1398 -0.7 -1.1 3-ketoacyl-ACP reductase compare
SM_b21397 -0.7 -1.2 hypothetical protein compare
SMa1188 -0.7 -2.1 NosX accesory protein compare
SMc01012 -0.7 -0.9 hypothetical protein compare
SMc00085 -0.7 -2.1 cytochrome oxidase complex biogenesis factor transmembrane protein compare
SMc02576 -0.7 -1.4 acetyltransferase compare
SMc02260 -0.7 -1.5 ABC transporter ATP-binding protein compare
SMc02266 -0.7 -0.5 hypothetical protein compare
SMc00344 -0.7 -1.5 hypothetical protein compare
SMc02635 -0.7 -2.8 DNA repair protein RecO compare
SMc03842 -0.7 -2.2 hypothetical protein compare
SMc02112 -0.7 -2.6 hypothetical protein compare
SM_b21633 -0.7 -1.0 enoyl-CoA hydratase compare
SMc02787 -0.7 -1.8 hypothetical protein compare
SMc00556 -0.7 -1.9 DNA repair protein RadA compare
SM_b21181 -0.7 -2.7 glutaryl-CoA dehydrogenase compare
SMa0085 -0.7 -1.8 dehydrogenase compare
SMa1917 -0.7 -1.6 hypothetical protein compare
SMc01845 -0.7 -1.0 transglycosylase transmembrane protein compare
SMa0894 -0.7 -2.0 hypothetical protein compare
SMc03091 -0.7 -1.9 arginase compare
SMc00941 -0.7 -1.3 hypothetical protein compare
SMc00378 -0.7 -1.8 exodeoxyribonuclease VII large subunit compare
SM_b20117 -0.7 -1.8 sugar transferase compare
SMc01172 -0.7 -2.1 thiosulfate sulfurtransferase compare
SMc04454 -0.7 -2.2 ABC transporter ATP-binding protein compare
SMc03924 -0.7 -3.5 glycogen synthase compare
SMc03127 -0.7 -1.1 ABC transporter permease compare
SMc00298 -0.7 -1.6 methionine aminopeptidase compare
SMc00194 -0.7 -1.9 hypothetical protein compare
SMc01553 -0.7 -1.7 acyl carrier protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress 6-Pentyl-2H-pyran-2-one in Sinorhizobium meliloti 1021

For stress 6-Pentyl-2H-pyran-2-one across organisms