Experiment set19S206 for Sinorhizobium meliloti 1021

Compare to:

LB with 6-Pentyl-2H-pyran-2-one 0.4557668333 mM

200 most important genes:

  gene name fitness t score description  
SMc02725 -5.2 -11.6 anthranilate synthase compare
SMc02767 -5.1 -7.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02766 -5.1 -14.3 tryptophan synthase subunit beta compare
SMa1635 -4.7 -2.0 hypothetical protein compare
SMc00236 -4.3 -4.1 Indole-3-glycerol phosphate synthase compare
SMc00235 -4.2 -5.7 anthranilate phosphoribosyltransferase compare
SMc02765 -4.1 -10.3 tryptophan synthase subunit alpha compare
SMc01242 -4.1 -3.6 signal peptide protein compare
SMc00012 -3.4 -2.8 cytochrome C oxidase assembly protein compare
SMc04005 -3.1 -8.8 pyruvate kinase compare
SMc04327 -3.0 -1.3 hypothetical protein compare
SMc01206 -3.0 -1.8 queuine tRNA-ribosyltransferase compare
SMc00013 -2.6 -3.0 cytochrome C oxidase subunit III transmembrane protein compare
SMc03935 -2.6 -5.2 hypothetical protein compare
SMc02114 -2.6 -1.7 hypothetical protein compare
SMc04003 -2.4 -2.3 50S ribosomal protein L36 compare
SMc02838 -2.3 -5.0 phosphoglyceromutase compare
SMc02245 -2.3 -1.5 dihydroorotate dehydrogenase 2 compare
SMc01765 -2.2 -2.0 hypothetical protein compare
SMc03900 -2.2 -8.4 cyclic beta-1,2-glucan ABc transporter compare
SMa0753 -2.2 -0.9 hypothetical protein compare
SMc02238 -2.2 -1.3 hypothetical protein compare
SMc01007 -2.2 -2.2 hypothetical protein compare
SMc04085 -2.2 -1.5 hypothetical protein compare
SMc04385 -2.1 -4.7 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SM_b21253 -2.1 -5.1 hypothetical protein compare
SMc04245 -2.1 -7.6 high-affinity zinc uptake system ABC transporter protein compare
SM_b21266 -2.0 -7.1 hypothetical protein compare
SMc04242 -2.0 -1.9 zinc uptake regulation protein compare
SMc02641 -2.0 -1.3 UDP-glucose 6-dehydrogenase compare
SM_b21252 -2.0 -14.1 glycosyltransferase compare
SMc01028 -2.0 -11.5 phosphopyruvate hydratase compare
SM_b21256 -2.0 -10.7 nucleotide sugar oxidase compare
SMc00876 -1.9 -4.0 ATP-binding MRP protein compare
SMc03070 -1.9 -2.2 glucose-6-phosphate 1-dehydrogenase compare
SMc04244 -1.9 -4.3 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMc02850 -1.9 -3.1 DNA polymerase I compare
SMc00760 -1.9 -3.7 recombinase A compare
SMc00349 -1.9 -5.4 GTP-binding protein LepA compare
SMc00963 -1.9 -1.3 hypothetical protein compare
SM_b21264 -1.9 -12.0 hypothetical protein compare
SMc00576 -1.9 -3.0 hypothetical protein compare
SMc01850 -1.9 -1.7 hypothetical protein compare
SMc03127 -1.8 -1.8 ABC transporter permease compare
SMc02753 -1.8 -0.7 PTS system transporter subunit IIA compare
SMc02858 -1.8 -0.7 chaperone protein DnaJ compare
SM_b21269 -1.8 -10.3 ABC transporter ATPase compare
SMc02266 -1.7 -1.0 hypothetical protein compare
SMc01800 -1.7 -1.2 cytochrome C oxidase assembly transmembrane protein compare
SM_b21268 -1.7 -7.5 hypothetical protein compare
SMc00010 -1.7 -1.6 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc03863 -1.6 -2.2 50S ribosomal protein L19 compare
SMc03967 -1.6 -1.0 Holliday junction resolvase compare
SMc00189 -1.6 -4.3 cytochrome C1 protein compare
SMa1073 -1.6 -1.1 TRm23b IS ATP-binding protein compare
SM_b21265 -1.6 -9.2 glycosyltransferase compare
SMc00334 -1.5 -1.1 cytidylate kinase compare
SMc01427 -1.5 -0.9 hypothetical protein compare
SMc00982 -1.5 -2.4 dioxygenase compare
SMc00821 -1.5 -0.8 hypothetical protein compare
SMc02362 -1.5 -1.7 cytochrome c-type biogenesis protein CcmE compare
SMc03850 -1.5 -0.8 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc00981 -1.4 -3.2 ferredoxin protein compare
SMc01099 -1.4 -2.4 tRNA pseudouridine synthase A compare
SMc00293 -1.4 -5.7 homoserine dehydrogenase compare
SM_b20948 -1.4 -0.8 glucosyltransferase compare
SMc02050 -1.4 -2.2 trigger factor compare
SMc00188 -1.4 -4.9 cytochrome B transmembrane protein compare
SMc01769 -1.4 -7.6 hypothetical protein compare
SMc00450 -1.4 -0.9 protoheme IX farnesyltransferase compare
SMc00619 -1.4 -1.3 hypothetical protein compare
SMc02985 -1.4 -0.9 hypothetical protein compare
SM_b20105 -1.3 -1.5 transcriptional regulator compare
SMc04243 -1.3 -3.3 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc03182 -1.3 -4.6 pH adaptation potassium efflux system E transmembrane protein compare
SMc00412 -1.3 -0.9 orotidine 5'-phosphate decarboxylase compare
SMa1095 -1.3 -0.9 hypothetical protein compare
SMc01124 -1.3 -6.5 PII uridylyl-transferase compare
SMc02640 -1.3 -1.2 UDP-glucuronic acid epimerase compare
SMc01595 -1.3 -1.2 sensor histidine kinase transmembrane protein compare
SMc02077 -1.3 -1.6 exodeoxyribonuclease III protein compare
SMc02503 -1.2 -5.8 hypothetical protein compare
SMc01440 -1.2 -3.3 hydrolase serine protease transmembrane protein compare
SMc00053 -1.2 -0.9 monovalent cation/H+ antiporter subunit C compare
SMc03179 -1.2 -7.2 monovalent cation/H+ antiporter subunit A compare
SMc00580 -1.2 -2.1 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc00187 -1.2 -2.2 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc02141 -1.2 -1.1 phosphate transporter PhoU compare
SMc00239 -1.2 -1.1 hypothetical protein compare
SMc03183 -1.2 -4.2 monovalent cation/H+ antiporter subunit F compare
SMc02695 -1.2 -3.0 GTP-dependent nucleic acid-binding protein EngD compare
SMa5033 -1.2 -1.1 hypothetical protein compare
SMc03181 -1.1 -5.4 monovalent cation/H+ antiporter subunit D compare
SMc01208 -1.1 -1.0 peptidyl-prolyl cis-trans isomerase B protein compare
SM_b20955 -1.1 -2.0 endo-beta-1,3-1,4-glycanase compare
SMc04221 -1.1 -2.1 hypothetical protein compare
SM_b22001 -1.1 -1.4 hypothetical protein compare
SMc00514 -1.1 -2.0 monooxygenase compare
SMc02755 -1.1 -4.4 S-adenosyl-L-homocysteine hydrolase compare
SMc03763 -1.1 -1.2 cytosine-specific methyltransferase compare
SMc02107 -1.1 -1.0 hypothetical protein compare
SM_b20810 -1.1 -4.4 membrane-located cell surface saccharide acetylase compare
SMc02510 -1.0 -0.6 ferric uptake regulation protein compare
SMc03242 -1.0 -1.9 GTP-binding protein compare
SMa0674 -1.0 -1.0 hypothetical protein compare
SM_b21213 -1.0 -2.8 serinethreonine protein phosphatase compare
SMc03091 -1.0 -2.8 arginase compare
SMa0267 -1.0 -4.3 GntR family transcriptional regulator compare
SM_b20258 -1.0 -2.5 transcriptional regulator compare
SMc03157 -1.0 -4.9 outer membrane lipoprotein transmembrane compare
SM_b20994 -1.0 -2.2 hypothetical protein compare
SMc00838 -0.9 -3.2 hypothetical protein compare
SMc02520 -0.9 -0.9 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc04382 -0.9 -7.9 beta-(1,2)-glucan production associated transmembrane protein compare
SMc02058 -0.9 -1.9 YAJC protein compare
SMc01164 -0.9 -4.4 hypothetical protein compare
SMc00458 -0.9 -5.0 transcriptional regulator compare
SMc01471 -0.9 -1.8 cytochrome C oxidase assembly factor transmembrane protein compare
SMc01360 -0.9 -0.6 aspartate carbamoyltransferase catalytic subunit compare
SMc02166 -0.9 -2.7 dihydroorotase compare
SMc02055 -0.9 -1.0 phytoene synthase compare
SMc01026 -0.9 -1.6 hypothetical protein compare
SMa0824 -0.9 -2.8 hypothetical protein compare
SMa1430 -0.9 -2.0 Dehydrogenase, Zn-dependent compare
SMc02659 -0.9 -2.9 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc04441 -0.9 -1.3 hypothetical protein compare
SMa0734 -0.9 -1.1 hypothetical protein compare
SMa2065 -0.9 -3.0 hypothetical protein compare
SMc03100 -0.8 -0.9 hypothetical protein compare
SMa1232 -0.8 -1.7 NapC membrane-bound tetraheme cytochrome c subunit compare
SMc02983 -0.8 -2.8 ornithine, DAP, or arginine decarboxylase compare
SMa1570 -0.8 -0.8 PilA2 pilus assembly protein compare
SMa0846 -0.8 -0.6 transposase, fragment compare
SMc04051 -0.8 -1.9 RNA polymerase sigma-E factor (sigma-24) protein compare
SM_b20026 -0.8 -1.8 hypothetical protein compare
SMc00329 -0.8 -1.5 iron response regulator protein compare
SMc04384 -0.8 -4.0 (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) compare
SMc02504 -0.8 -3.7 transcriptional regulator compare
SMc03801 -0.8 -1.8 thioredoxin protein compare
SMc04383 -0.8 -2.5 putative hydrolase, required for lysine catabolism (from data) compare
SMc03046 -0.8 -2.7 transcriptional regulator compare
SMa0431 -0.8 -0.9 hypothetical protein compare
SMc02799 -0.8 -1.0 16S rRNA methyltransferase GidB compare
SMc00174 -0.8 -3.3 hypothetical protein compare
SMa1585 -0.8 -2.3 hypothetical protein compare
SMa1160 -0.8 -1.9 hypothetical protein compare
SMc00764 -0.8 -2.6 hypothetical protein compare
SMa0740 -0.8 -0.8 hypothetical protein compare
SMc01929 -0.8 -1.5 hypothetical protein compare
SMc00670 -0.8 -1.5 histidine transport ATP-binding ABC transporter protein compare
SMc03069 -0.8 -1.2 6-phosphogluconolactonase compare
SM_b21108 -0.8 -2.2 L-fucose mutarotase (EC 5.1.3.29) (from data) compare
SMc01939 -0.8 -0.8 urease subunit beta compare
SMc00540 -0.8 -1.7 hypothetical protein compare
SM_b20509 -0.8 -1.3 transcriptional regulator compare
SMc01916 -0.8 -1.7 signal peptide protein compare
SMc02635 -0.8 -3.4 DNA repair protein RecO compare
SM_b21181 -0.8 -3.9 glutaryl-CoA dehydrogenase compare
SMa0360 -0.7 -1.8 transposase compare
SM_b21156 -0.7 -2.9 hypothetical protein compare
SM_b20143 -0.7 -0.9 oligopeptide ABC transporter permease compare
SMc00355 -0.7 -1.6 hypothetical protein compare
SMc00009 -0.7 -3.4 cytochrome C oxidase subunit II protein compare
SMc01176 -0.7 -1.9 hypothetical protein compare
SMc01441 -0.7 -1.6 membrane bound protease compare
SMc01505 -0.7 -1.1 hypothetical protein compare
SM_b20081 -0.7 -1.3 hypothetical protein compare
SMc04194 -0.7 -2.9 transmembrane protein compare
SMc00711 -0.7 -2.3 cyclohexadienyl dehydrogenase compare
SMc02576 -0.7 -1.5 acetyltransferase compare
SMc00041 -0.7 -3.3 hypothetical protein compare
SMc02558 -0.7 -2.6 hypothetical protein compare
SM_b21551 -0.7 -1.0 hypothetical protein compare
SMc01112 -0.7 -2.6 hypothetical protein compare
SMc00176 -0.7 -2.6 hypothetical protein compare
SMc01091 -0.7 -1.2 hypothetical protein compare
SMa0816 -0.7 -1.9 FixX ferredoxin-like protein compare
SMa0520 -0.7 -2.0 RpiR family transcriptional regulator compare
SMc03899 -0.7 -1.0 hypothetical protein compare
SMa0545 -0.7 -1.7 hypothetical protein compare
SMc02863 -0.7 -2.9 recombination protein F compare
SM_b21494 -0.7 -4.1 ornithine cyclodeaminase compare
SMa0810 -0.7 -1.5 nitrogen fixation protein FixU compare
SMa0050 -0.7 -1.7 hypothetical protein compare
SMc04345 -0.7 -1.2 hypothetical protein compare
SMc00175 -0.7 -3.0 ABC transporter ATP-binding protein compare
SM_b20452 -0.7 -1.2 hypothetical protein compare
SMc00085 -0.7 -2.1 cytochrome oxidase complex biogenesis factor transmembrane protein compare
SMc00298 -0.7 -1.7 methionine aminopeptidase compare
SM_b20931 -0.7 -2.7 sugar uptake ABC transporter substrate-binding protein precursor compare
SMc02861 -0.7 -1.2 phosphate transporter compare
SMa1223 -0.7 -1.5 hypothetical protein compare
SMa0806 -0.7 -2.3 SyrB-like regulator compare
SM_b20411 -0.7 -1.6 hypothetical protein compare
SMa1174 -0.7 -0.7 hypothetical protein compare
SMc00419 -0.7 -1.4 glutathione synthetase compare
SM_b21523 -0.6 -2.0 cell division inhibitor protein compare
SMc03795 -0.6 -0.9 isopropylmalate isomerase small subunit compare
SM_b21474 -0.6 -3.3 3-ketoacyl-ACP reductase compare
SMc02165 -0.6 -1.3 orotate phosphoribosyltransferase compare


Specific Phenotypes

For 1 genes in this experiment

For stress 6-Pentyl-2H-pyran-2-one in Sinorhizobium meliloti 1021

For stress 6-Pentyl-2H-pyran-2-one across organisms