Experiment set19S202 for Sinorhizobium meliloti 1021

Compare to:

LB no stress control

200 most important genes:

  gene name fitness t score description  
SMc02767 -5.7 -6.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02766 -5.1 -14.4 tryptophan synthase subunit beta compare
SMc00236 -5.0 -3.5 Indole-3-glycerol phosphate synthase compare
SMc00235 -3.9 -5.3 anthranilate phosphoribosyltransferase compare
SMc02765 -3.9 -10.6 tryptophan synthase subunit alpha compare
SMc02725 -3.9 -12.4 anthranilate synthase compare
SMa1635 -3.1 -1.9 hypothetical protein compare
SMc01427 -3.0 -1.3 hypothetical protein compare
SMc04327 -2.9 -1.3 hypothetical protein compare
SMc03935 -2.8 -4.9 hypothetical protein compare
SMc01242 -2.7 -3.3 signal peptide protein compare
SMc01800 -2.7 -1.6 cytochrome C oxidase assembly transmembrane protein compare
SMc02695 -2.6 -3.6 GTP-dependent nucleic acid-binding protein EngD compare
SMc00580 -2.5 -2.9 4-hydroxythreonine-4-phosphate dehydrogenase compare
SMc03900 -2.3 -8.5 cyclic beta-1,2-glucan ABc transporter compare
SMc00981 -2.3 -4.0 ferredoxin protein compare
SMc02245 -2.3 -1.5 dihydroorotate dehydrogenase 2 compare
SMc03763 -2.2 -1.5 cytosine-specific methyltransferase compare
SMc01850 -2.2 -1.5 hypothetical protein compare
SMc02906 -2.2 -0.9 hypothetical protein compare
SMa1099 -2.2 -3.1 CycB1 cytochrome c-552 precursor compare
SMc01431 -2.2 -12.1 acetolactate synthase 3 catalytic subunit compare
SMa0753 -2.2 -0.9 hypothetical protein compare
SMc00492 -2.2 -0.9 hypothetical protein compare
SMc00427 -2.1 -2.5 peptide chain release factor RF-3 protein compare
SMc00349 -2.0 -5.5 GTP-binding protein LepA compare
SMa1002 -2.0 -1.5 hypothetical protein compare
SMc04224 -1.9 -1.6 hypothetical protein compare
SMc01147 -1.9 -1.3 coproporphyrinogen III oxidase compare
SMc00982 -1.9 -2.2 dioxygenase compare
SMc00963 -1.8 -1.2 hypothetical protein compare
SMa1101 -1.8 -2.2 hypothetical protein compare
SMc04244 -1.8 -4.3 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMc03100 -1.8 -1.4 hypothetical protein compare
SMc04243 -1.7 -4.3 high-affinity zinc uptake system membrane ABC transporter protein compare
SMa0740 -1.7 -1.4 hypothetical protein compare
SMc04245 -1.7 -6.1 high-affinity zinc uptake system ABC transporter protein compare
SMc04045 -1.7 -8.3 dihydroxy-acid dehydratase compare
SMc00010 -1.7 -1.6 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc00876 -1.7 -3.5 ATP-binding MRP protein compare
SMa2289 -1.7 -1.7 hypothetical protein compare
SMc04005 -1.7 -7.1 pyruvate kinase compare
SMc04296 -1.6 -0.8 cell division protein FtsZ compare
SMc00013 -1.6 -2.1 cytochrome C oxidase subunit III transmembrane protein compare
SMc01124 -1.6 -6.2 PII uridylyl-transferase compare
SMc00917 -1.6 -3.8 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc02850 -1.6 -2.8 DNA polymerase I compare
SMc00293 -1.5 -5.2 homoserine dehydrogenase compare
SMc02084 -1.5 -0.9 biopolymer transport transmembrane protein compare
SMc03850 -1.5 -0.8 heme exporter D (cytochrome C-type biogenesis protein) transmembrane compare
SMc02647 -1.5 -1.2 transcriptional regulator compare
SMc02641 -1.4 -1.4 UDP-glucose 6-dehydrogenase compare
SMc01769 -1.4 -7.5 hypothetical protein compare
SMc02561 -1.4 -2.2 hypothetical protein compare
SM_b20948 -1.4 -0.8 glucosyltransferase compare
SMc03795 -1.4 -1.6 isopropylmalate isomerase small subunit compare
SMc01441 -1.4 -2.4 membrane bound protease compare
SMc03069 -1.4 -2.0 6-phosphogluconolactonase compare
SMc04003 -1.4 -2.2 50S ribosomal protein L36 compare
SMc04346 -1.4 -3.6 ketol-acid reductoisomerase compare
SMc00412 -1.3 -0.9 orotidine 5'-phosphate decarboxylase compare
SMc00458 -1.3 -6.8 transcriptional regulator compare
SMc00450 -1.3 -0.9 protoheme IX farnesyltransferase compare
SMc01206 -1.3 -1.3 queuine tRNA-ribosyltransferase compare
SMc02833 -1.3 -1.2 penicillin-insensitive murein endopeptidase compare
SMc02435 -1.3 -1.5 methyltransferase compare
SMc01004 -1.3 -5.6 phosphoribosyl-AMP cyclohydrolase compare
SMc03070 -1.3 -2.0 glucose-6-phosphate 1-dehydrogenase compare
SMa0520 -1.3 -2.8 RpiR family transcriptional regulator compare
SMc01112 -1.2 -3.4 hypothetical protein compare
SMc04088 -1.2 -5.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMa1095 -1.2 -0.9 hypothetical protein compare
SMc02077 -1.2 -2.3 exodeoxyribonuclease III protein compare
SMc00576 -1.2 -2.4 hypothetical protein compare
SMc02985 -1.2 -1.1 hypothetical protein compare
SMc02362 -1.2 -1.1 cytochrome c-type biogenesis protein CcmE compare
SMc02909 -1.2 -1.7 transglycosylase transmembrane protein compare
SMc00298 -1.2 -2.4 methionine aminopeptidase compare
SM_b21175 -1.2 -2.7 phosphate uptake ABC transporter permease compare
SMc00176 -1.2 -4.2 hypothetical protein compare
SMc01595 -1.2 -1.0 sensor histidine kinase transmembrane protein compare
SMc02155 -1.1 -6.8 hypothetical protein compare
SMc00175 -1.1 -3.4 ABC transporter ATP-binding protein compare
SMc00554 -1.1 -5.0 amidophosphoribosyltransferase compare
SMc04085 -1.1 -2.0 hypothetical protein compare
SMa0545 -1.1 -2.4 hypothetical protein compare
SMc02165 -1.1 -1.5 orotate phosphoribosyltransferase compare
SMc00918 -1.1 -5.4 ATP phosphoribosyltransferase regulatory subunit compare
SM_b22001 -1.1 -1.0 hypothetical protein compare
SMc04382 -1.1 -9.0 beta-(1,2)-glucan production associated transmembrane protein compare
SM_b20810 -1.1 -4.4 membrane-located cell surface saccharide acetylase compare
SMc02558 -1.1 -2.7 hypothetical protein compare
SMc00419 -1.1 -2.1 glutathione synthetase compare
SMc00760 -1.1 -2.6 recombinase A compare
SMc04242 -1.1 -1.1 zinc uptake regulation protein compare
SMc03890 -1.0 -1.9 transcriptional regulator compare
SMa5011 -1.0 -1.1 oxidoreductase compare
SMc04002 -1.0 -4.2 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc04385 -1.0 -3.0 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc01347 -1.0 -1.2 hypothetical protein compare
SMc03996 -1.0 -2.1 thiamine-phosphate pyrophosphorylase compare
SMc00993 -1.0 -5.0 phosphoribosylamine--glycine ligase compare
SMc00099 -1.0 -1.5 alkylphosphonate uptake protein compare
SMc02659 -1.0 -3.9 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc01417 -1.0 -1.3 hypothetical protein compare
SMc02115 -1.0 -0.4 hypothetical protein compare
SMc00488 -0.9 -6.5 phosphoribosylformylglycinamidine synthase II compare
SMc00647 -0.9 -3.2 ribosomal large subunit pseudouridine synthase compare
SMc00514 -0.9 -2.2 monooxygenase compare
SMc02983 -0.9 -3.0 ornithine, DAP, or arginine decarboxylase compare
SMc01041 -0.9 -1.5 NIFR3-like protein compare
SM_b21174 -0.9 -1.5 phosphate uptake ABC transporter permease compare
SMc02143 -0.9 -2.6 phosphate ABC transporter permease compare
SMc00320 -0.9 -4.2 ribosome-binding factor A compare
SM_b21177 -0.9 -2.8 phosphate uptake ABC transporter ATP-binding protein compare
SMc00615 -0.9 -4.5 phosphoribosylaminoimidazole synthetase compare
SMc00494 -0.9 -1.5 phosphoribosylformylglycinamidine synthase subunit PurS compare
SM_b21173 -0.9 -1.0 hypothetical protein compare
SM_b21296 -0.9 -1.8 hypothetical protein compare
SMc01178 -0.9 -0.7 multidrug transmembrane resistance signal peptide protein compare
SM_b21004 -0.9 -3.0 hypothetical protein compare
SMa1413 -0.9 -1.4 hypothetical protein compare
SMa5033 -0.9 -0.9 hypothetical protein compare
SMc01360 -0.8 -0.6 aspartate carbamoyltransferase catalytic subunit compare
SMc01342 -0.8 -1.9 hypothetical protein compare
SMc02234 -0.8 -0.9 hypothetical protein compare
SMc01208 -0.8 -1.0 peptidyl-prolyl cis-trans isomerase B protein compare
SMc02640 -0.8 -1.2 UDP-glucuronic acid epimerase compare
SMa2167 -0.8 -2.2 hypothetical protein compare
SMc02520 -0.8 -1.1 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc02856 -0.8 -4.6 penicillin-binding protein compare
SM_b21633 -0.8 -1.1 enoyl-CoA hydratase compare
SMa0279 -0.8 -2.0 hypothetical protein compare
SMc02570 -0.8 -4.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc00174 -0.8 -3.0 hypothetical protein compare
SMc02755 -0.8 -3.3 S-adenosyl-L-homocysteine hydrolase compare
SMc01207 -0.8 -1.2 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc01819 -0.8 -2.3 transcriptional regulator compare
SMc00556 -0.8 -2.7 DNA repair protein RadA compare
SMc02307 -0.8 -3.1 histidinol dehydrogenase compare
SMc01833 -0.8 -1.2 hypothetical protein compare
SMc04453 -0.8 -0.5 hypothetical protein compare
SM_b21176 -0.8 -2.3 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMc03128 -0.8 -2.2 ABC transporter permease compare
SMc00987 -0.8 -1.2 hypothetical protein compare
SMc01516 -0.8 -2.1 hypothetical protein compare
SMc00495 -0.8 -1.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc01836 -0.7 -1.3 hypothetical protein compare
SMa0776 -0.7 -0.8 TRm23b IS ATP-binding protein compare
SMc01852 -0.7 -2.5 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc01222 -0.7 -1.5 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc00048 -0.7 -2.0 hypothetical protein compare
SMa0835 -0.7 -2.9 hypothetical protein compare
SMc00667 -0.7 -1.5 hypothetical protein compare
SMc00189 -0.7 -2.2 cytochrome C1 protein compare
SMc02166 -0.7 -2.3 dihydroorotase compare
SMc00177 -0.7 -2.8 hypothetical protein compare
SM_b20994 -0.7 -2.0 hypothetical protein compare
SMc03153 -0.7 -2.1 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMa0677 -0.7 -2.7 ABC transporter substrate-binding protein compare
SMc02639 -0.7 -1.3 transcriptional regulator compare
SMc03127 -0.7 -1.2 ABC transporter permease compare
SMa0189 -0.7 -2.5 hypothetical protein compare
SMc02050 -0.7 -1.2 trigger factor compare
SMc00614 -0.7 -2.6 phosphoribosylglycinamide formyltransferase compare
SM_b20397 -0.7 -2.1 oxidoreductase compare
SMc02107 -0.7 -0.7 hypothetical protein compare
SMc01501 -0.7 -1.3 mannitol 2-dehydrogenase compare
SMc00461 -0.7 -1.5 deoxyuridine 5'-triphosphate nucleotidohydrolase compare
SMa1521 -0.7 -2.4 hypothetical protein compare
SMc04266 -0.7 -2.0 hypothetical protein compare
SMa1630 -0.7 -1.2 hypothetical protein compare
SMc00188 -0.7 -2.7 cytochrome B transmembrane protein compare
SMc00853 -0.6 -1.8 hypothetical protein compare
SMc02799 -0.6 -0.9 16S rRNA methyltransferase GidB compare
SMc00012 -0.6 -1.0 cytochrome C oxidase assembly protein compare
SMc00821 -0.6 -0.5 hypothetical protein compare
SMa1256 -0.6 -2.3 hypothetical protein compare
SMc01991 -0.6 -0.9 short chain dehydrogenase compare
SMc00802 -0.6 -0.9 hypothetical protein compare
SMc01578 -0.6 -3.8 aspartate aminotransferase compare
SMa1073 -0.6 -0.6 TRm23b IS ATP-binding protein compare
SMc00859 -0.6 -1.3 hypothetical protein compare
SM_b21524 -0.6 -1.4 septum formation inhibitor compare
SMa1120 -0.6 -1.9 ABC transporter ATP-binding protein compare
SM_b20474 -0.6 -1.3 hypothetical protein compare
SMc03182 -0.6 -2.3 pH adaptation potassium efflux system E transmembrane protein compare
SMc01042 -0.6 -1.9 nitrogen regulation protein compare
SMc00800 -0.6 -1.0 hypothetical protein compare
SM_b20806 -0.6 -2.2 hypothetical protein compare
SMc03092 -0.6 -1.9 transcriptional regulator compare
SMc00493 -0.6 -1.9 phosphoribosylformylglycinamidine synthase I compare
SMa1232 -0.6 -1.9 NapC membrane-bound tetraheme cytochrome c subunit compare
SMa0674 -0.6 -0.7 hypothetical protein compare
SMc01471 -0.6 -1.3 cytochrome C oxidase assembly factor transmembrane protein compare
SMc00512 -0.6 -2.5 hypothetical protein compare
SM_b20303 -0.6 -1.4 hypothetical protein compare
SMc02071 -0.6 -1.8 hydrolase glycosidase compare
SMc01280 -0.6 -1.0 protease compare
SM_b20059 -0.6 -2.6 SAM-dependent methyltransferase compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in lb no stress control experiments