Experiment set19S200 for Sinorhizobium meliloti 1021

Compare to:

DMSO control

200 most detrimental genes:

  gene name fitness t score description  
SMc00191 +1.3 3.2 hypothetical protein compare
SMc02544 +1.2 1.4 hypothetical protein compare
SMc02683 +1.2 2.4 hypothetical protein compare
SMa1058 +1.0 2.5 hypothetical protein compare
SMa2053 +1.0 2.8 MocE-like protein compare
SMc02485 +1.0 3.1 signal peptide protein compare
SMc01315 +1.0 1.7 hypothetical protein compare
SMc02247 +1.0 1.4 signal peptide protein compare
SMc01447 +0.9 1.8 hypothetical protein compare
SMc05015 +0.9 3.2 recombinase compare
SMa0833 +0.9 1.5 hypothetical protein compare
SM_b20953 +0.9 1.3 hypothetical protein compare
SMc02102 +0.9 2.1 hypothetical protein compare
SMc00241 +0.8 1.5 transcriptional regulator compare
SM_b20909 +0.8 2.2 hypothetical protein compare
SMa1240 +0.8 1.2 NapF ferredoxin component of periplasmic nitrate reductase compare
SMa0450 +0.8 2.0 hypothetical protein compare
SMa1455 +0.8 2.7 hypothetical protein compare
SMc00928 +0.7 1.1 signal peptide protein compare
SMc03120 +0.7 2.2 ABC transporter ATP-binding protein compare
SMc01991 +0.7 1.5 short chain dehydrogenase compare
SMc02084 +0.7 0.7 biopolymer transport transmembrane protein compare
SMc02373 +0.7 1.2 hypothetical protein compare
SM_b20293 +0.7 1.0 hypothetical protein compare
SMc03028 +0.7 2.2 flagellar basal body rod protein FlgC compare
SMc00431 +0.7 1.9 hypothetical protein compare
SMc01187 +0.7 1.1 rare lipoprotein A compare
SMa1053 +0.7 0.9 hypothetical protein compare
SMc01472 +0.7 0.7 50S ribosomal protein L11 methyltransferase compare
SM_b22005 +0.7 1.2 hypothetical protein compare
SMc01495 +0.7 2.0 transcriptional regulator compare
SMc02614 +0.7 2.2 hypothetical protein compare
SMa1017 +0.6 1.3 hypothetical protein compare
SMc04298 +0.6 1.3 hypothetical protein compare
SMa1046 +0.6 2.6 adenylate cyclase compare
SMc01041 +0.6 1.4 NIFR3-like protein compare
SM_b20540 +0.6 0.7 hypothetical protein compare
SMa0874 +0.6 1.4 NodN dehydratase compare
SMc04233 +0.6 2.1 hypothetical protein compare
SM_b21049 +0.6 1.7 hypothetical protein compare
SMc02724 +0.6 0.9 hypothetical protein compare
SMc03801 +0.6 1.3 thioredoxin protein compare
SMc00726 +0.6 0.8 thiol:disulfide interchange redox-active center transmembrane protein compare
SMc03279 +0.6 1.3 transposase number 2 for insertion sequence ISRM28 compare
SMc03999 +0.6 1.8 hypothetical protein compare
SMc02046 +0.5 1.0 hypothetical protein compare
SM_b21085 +0.5 1.2 hypothetical protein compare
SMa1625 +0.5 1.1 LysR family transcriptional regulator compare
SM_b20628 +0.5 2.3 hypothetical protein compare
SMc01701 +0.5 0.9 hypothetical protein compare
SM_b21296 +0.5 1.5 hypothetical protein compare
SMc01276 +0.5 2.2 phosphoglycolate phosphatase compare
SM_b20896 +0.5 1.4 LysR family transcriptional regulator compare
SMc03100 +0.5 0.6 hypothetical protein compare
SMc03833 +0.5 1.5 hypothetical protein compare
SM_b20602 +0.5 2.3 branched-chain amino acid ABC transporter ATP-binding protein compare
SMc00854 +0.5 0.8 hypothetical protein compare
SMa1001 +0.5 2.8 hypothetical protein compare
SM_b21400 +0.5 1.9 hypothetical protein compare
SMa1639 +0.5 1.0 hypothetical protein compare
SMa2141 +0.5 1.9 formyltetrahydrofolate deformylase compare
SMc01757 +0.5 1.2 hypothetical protein compare
SMc00099 +0.5 0.8 alkylphosphonate uptake protein compare
SMc00970 +0.5 1.5 exodeoxyribonuclease VII small subunit compare
SM_b20117 +0.5 1.8 sugar transferase compare
SMc03242 +0.5 1.1 GTP-binding protein compare
SMc02035 +0.5 2.4 oxidoreductase compare
SMc02338 +0.5 1.0 periplasmic binding ABC transporter protein compare
SMc02727 +0.5 2.0 hypothetical protein compare
SMc02697 +0.5 0.7 hypothetical protein compare
SMa0164 +0.5 2.1 hypothetical protein compare
SM_b20275 +0.5 2.5 hypothetical protein compare
SMc00607 +0.5 2.6 signal peptide protein compare
SM_b21042 +0.5 2.2 peptidase T compare
SMc00088 +0.5 1.0 hypothetical protein compare
SM_b20208 +0.5 1.7 pyrroloquinoline quinone biosynthesis protein PqqE compare
SMa0981 +0.5 1.9 NtrR2 transcription regulator compare
SMc00650 +0.5 0.6 hypothetical protein compare
SM_b20689 +0.5 2.3 exodeoxyribonuclease III protein compare
SMa2099 +0.5 3.1 NAD-dependent epimerase/dehydratase compare
SMc02164 +0.5 1.4 fructokinase compare
SMc04453 +0.5 0.4 hypothetical protein compare
SM_b20357 +0.5 1.8 histidine kinase compare
SMa0922 +0.5 2.8 hypothetical protein compare
SMc01448 +0.5 2.0 hypothetical protein compare
SMa0969 +0.5 2.7 Response regulator compare
SMa0992 +0.5 1.0 hypothetical protein compare
SMa0988 +0.5 2.1 hypothetical protein compare
SM_b21018 +0.5 2.7 sugar ABC transporter permease compare
SMc03786 +0.5 2.6 bacterioferritin compare
SMc04439 +0.5 1.5 glycine betaine transport ATP-binding ABC transporter protein compare
SMa2317 +0.5 1.6 hypothetical protein compare
SMc03790 +0.5 2.3 hypothetical protein compare
SM_b20176 +0.5 1.9 hypothetical protein compare
SMc00507 +0.5 1.3 hypothetical protein compare
SMc04881 +0.4 1.8 virulence associated protein compare
SMc04054 +0.4 2.6 hypothetical protein compare
SMc01430 +0.4 1.9 acetolactate synthase 3 regulatory subunit compare
SMc03836 +0.4 1.0 acyl-CoA thioesterase i protein compare
SMa1303 +0.4 2.2 VirB10-like transmembrane secretion protein compare
SMc02114 +0.4 0.8 hypothetical protein compare
SMc02385 +0.4 1.0 hypothetical protein compare
SMa1547 +0.4 1.8 protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) compare
SMc00492 +0.4 0.3 hypothetical protein compare
SMc04220 +0.4 0.7 transcriptional regulator compare
SMc04168 +0.4 2.1 hypothetical protein compare
SMa0883 +0.4 2.2 hypothetical protein compare
SM_b20616 +0.4 1.3 thiamine biosynthesis oxidoreductase compare
SMa1759 +0.4 1.8 GntR family transcriptional regulator compare
SMa2135 +0.4 2.4 GlyA2 serine hydroxymethyltransferase, SHMT compare
SMa1430 +0.4 1.2 Dehydrogenase, Zn-dependent compare
SMa2281 +0.4 1.7 hypothetical protein compare
SMa1400 +0.4 1.0 acyl-CoA dehydrogenase compare
SMa1578 +0.4 1.2 CpaA2 pilus assembly protein compare
SMc02853 +0.4 1.7 hypothetical protein compare
SMc04357 +0.4 1.2 hypothetical protein compare
SMc04131 +0.4 2.5 hypothetical protein compare
SMa1507 +0.4 2.4 hypothetical protein compare
SMa1765 +0.4 0.6 hypothetical protein compare
SM_b20143 +0.4 0.7 oligopeptide ABC transporter permease compare
SMc02864 +0.4 1.3 molybdopterin biosynthesis protein MoeB compare
SMc01024 +0.4 0.8 preprotein translocase subunit SecG compare
SMa1878 +0.4 1.4 transposase compare
SMc02333 +0.4 1.7 hypothetical protein compare
SMa0638 +0.4 0.8 hypothetical protein compare
SMa0771 +0.4 0.7 hypothetical protein compare
SMc01417 +0.4 0.8 hypothetical protein compare
SMc01979 +0.4 2.0 sugar transport system permease ABC transporter protein compare
SMa0882 +0.4 0.8 hypothetical protein compare
SMc00791 +0.4 0.8 hypothetical protein compare
SM_b20018 +0.4 1.7 sugar ABC transporter substrate-binding protein compare
SMc00555 +0.4 0.7 colicin V production transmembrane protein compare
SMc03844 +0.4 1.1 hypothetical protein compare
SMa1243 +0.4 1.2 Azu1 pseudoazurin compare
SM_b21212 +0.4 1.1 hypothetical protein compare
SMc00184 +0.4 1.0 tRNA/rRNA methyltransferase compare
SM_b21373 +0.4 1.5 D-tagatose 6-phosphate 4-epimerase [EC:5.1.3.40] (from data) compare
SM_b21509 +0.4 0.8 plasmid stability protein compare
SMc00504 +0.4 2.0 transcriptional regulator compare
SM_b20157 +0.4 2.6 ABC transporter substrate-binding protein compare
SMc01509 +0.4 1.0 hypothetical protein compare
SMc02631 +0.4 0.9 hypothetical protein compare
SMc03865 +0.4 2.7 amino-acid transport system permease ABC transporter protein compare
SM_b20256 +0.4 1.4 hypothetical protein compare
SMa1138 +0.4 1.6 hypothetical protein compare
SMc03883 +0.4 1.7 monofunctional biosynthetic peptidoglycan transglycosylase compare
SMc00352 +0.4 0.9 acetyltransferase compare
SM_b20998 +0.4 2.5 hypothetical protein compare
SM_b20962 +0.4 1.1 phoshomethylpyrimidine kinase compare
SMa0956 +0.4 2.6 AtrB glutamate-1-semialdehyde 2,1-aminomutase compare
SM_b21036 +0.4 1.7 hypothetical protein compare
SMa0903 +0.4 2.2 hypothetical protein compare
SMc02609 +0.4 1.8 transcriptional regulator compare
SMa0753 +0.4 0.3 hypothetical protein compare
SMc00233 +0.4 1.8 hypothetical protein compare
SMc02879 +0.4 1.5 hypothetical protein compare
SMc00019 +0.4 0.9 hypothetical protein compare
SM_b20302 +0.4 1.1 hypothetical protein compare
SMc00684 +0.4 0.6 hypothetical protein compare
SMa2329 +0.4 1.7 potassium-transporting ATPase subunit C compare
SM_b21084 +0.4 0.5 hypothetical protein compare
SM_b20257 +0.4 1.7 adenylate cyclase compare
SMa0237 +0.4 2.4 dehydrogenase compare
SMc00799 +0.4 2.1 hypothetical protein compare
SMa1487 +0.4 2.3 cytochrome C compare
SMa5031 +0.4 0.8 hypothetical protein compare
SMc01468 +0.4 0.7 chemotaxis protein compare
SMc04259 +0.4 1.3 ABC transporter for D-Cellobiose and D-Salicin, periplasmic substrate-binding protein (from data) compare
SMa0249 +0.4 1.4 TRAP-type small permease component compare
SMa1118 +0.4 0.7 HspC2 heat shock protein compare
SMc03008 +0.4 0.6 chemotaxis protein compare
SMc01266 +0.4 2.2 hypothetical protein compare
SMa0763 +0.4 1.7 hypothetical protein compare
SMa0958 +0.4 2.9 acetolactate synthase catalytic subunit compare
SMc02564 +0.4 1.4 LysM domain/BON superfamily protein compare
SMa1450 +0.4 1.4 thiolase compare
SMa0789 +0.4 0.7 GntR family transcriptional regulator compare
SM_b20089 +0.4 0.9 hypothetical protein compare
SMc01000 +0.4 1.6 hypothetical protein compare
SMa0742 +0.4 2.4 hypothetical protein compare
SMc04296 +0.4 0.3 cell division protein FtsZ compare
SMc01422 +0.4 1.2 hypothetical protein compare
SMc01518 +0.4 1.5 hypothetical protein compare
SMa0905 +0.4 0.7 hypothetical protein compare
SMc03019 +0.4 1.7 flagellar motor switch protein G compare
SMc02354 +0.4 1.3 hypothetical protein compare
SMc01337 +0.4 0.8 hypothetical protein compare
SMc04230 +0.4 1.8 transmembrane signal peptide protein compare
SMc02250 +0.4 1.1 large-conductance mechanosensitive channel compare
SMa1753 +0.4 2.1 ABC transporter permease compare
SMc04436 +0.4 1.2 hypothetical protein compare
SM_b20412 +0.4 1.1 hypothetical protein compare
SMc03950 +0.4 1.5 proton-translocating nicotinamide nucleotide transhydrogenase subunit protein compare
SMc03245 +0.4 1.4 amidase compare
SMa0983 +0.4 2.0 hypothetical protein compare
SMc04428 +0.4 1.1 hypothetical protein compare
SM_b21332 +0.4 1.4 hypothetical protein compare
SMc03821 +0.4 1.6 hypothetical protein compare
SMa1927 +0.3 1.7 hypothetical protein compare
SM_b20464 +0.3 1.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in dmso control experiments

For dmso control Dimethyl Sulfoxide across organisms