Experiment set19S199 for Sinorhizobium meliloti 1021

Compare to:

DMSO control

200 most important genes:

  gene name fitness t score description  
SMc02767 -5.5 -8.3 N-(5'-phosphoribosyl)anthranilate isomerase compare
SMc02766 -4.6 -15.5 tryptophan synthase subunit beta compare
SMa1635 -4.6 -2.1 hypothetical protein compare
SMc02725 -4.2 -12.9 anthranilate synthase compare
SMc00236 -4.0 -3.8 Indole-3-glycerol phosphate synthase compare
SMc00235 -3.9 -5.4 anthranilate phosphoribosyltransferase compare
SMc02765 -3.5 -11.0 tryptophan synthase subunit alpha compare
SMc00053 -3.4 -1.5 monovalent cation/H+ antiporter subunit C compare
SMa0846 -3.0 -1.4 transposase, fragment compare
SMc03935 -2.9 -4.5 hypothetical protein compare
SMc04453 -2.9 -1.3 hypothetical protein compare
SMc01207 -2.7 -2.6 S-adenosylmethionine--tRNA ribosyltransferase-isomerase compare
SMc01242 -2.7 -2.3 signal peptide protein compare
SM_b21175 -2.5 -3.5 phosphate uptake ABC transporter permease compare
SMc00427 -2.4 -2.3 peptide chain release factor RF-3 protein compare
SMc01431 -2.3 -10.9 acetolactate synthase 3 catalytic subunit compare
SMc03763 -2.2 -1.5 cytosine-specific methyltransferase compare
SMc02245 -2.2 -1.5 dihydroorotate dehydrogenase 2 compare
SMc02238 -2.1 -1.3 hypothetical protein compare
SMc04243 -2.1 -4.5 high-affinity zinc uptake system membrane ABC transporter protein compare
SMc03900 -2.0 -8.0 cyclic beta-1,2-glucan ABc transporter compare
SMc03069 -2.0 -2.3 6-phosphogluconolactonase compare
SMc01417 -2.0 -2.6 hypothetical protein compare
SMc01595 -1.9 -1.3 sensor histidine kinase transmembrane protein compare
SMc02659 -1.9 -4.5 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc03863 -1.9 -2.4 50S ribosomal protein L19 compare
SMc00576 -1.8 -3.0 hypothetical protein compare
SMc00876 -1.8 -3.2 ATP-binding MRP protein compare
SMc03070 -1.8 -2.1 glucose-6-phosphate 1-dehydrogenase compare
SMc04346 -1.8 -5.7 ketol-acid reductoisomerase compare
SMc00963 -1.8 -1.2 hypothetical protein compare
SMc00982 -1.8 -2.4 dioxygenase compare
SM_b20955 -1.8 -2.6 endo-beta-1,3-1,4-glycanase compare
SMc04003 -1.8 -2.4 50S ribosomal protein L36 compare
SMc04245 -1.7 -7.0 high-affinity zinc uptake system ABC transporter protein compare
SMc01929 -1.7 -2.3 hypothetical protein compare
SM_b20026 -1.7 -2.0 hypothetical protein compare
SMc00981 -1.7 -3.5 ferredoxin protein compare
SMa5010 -1.7 -1.3 hypothetical protein compare
SMc04085 -1.6 -2.2 hypothetical protein compare
SMc00419 -1.6 -2.6 glutathione synthetase compare
SMa0740 -1.6 -1.4 hypothetical protein compare
SMc02050 -1.6 -2.3 trigger factor compare
SMc03967 -1.6 -1.0 Holliday junction resolvase compare
SMc04045 -1.6 -8.0 dihydroxy-acid dehydratase compare
SMc00495 -1.5 -4.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
SMc04221 -1.5 -2.4 hypothetical protein compare
SMc00760 -1.5 -3.1 recombinase A compare
SMa0776 -1.5 -1.3 TRm23b IS ATP-binding protein compare
SMc00010 -1.5 -1.4 cytochrome C oxidase polypeptide I transmembrane protein compare
SMc00293 -1.5 -4.4 homoserine dehydrogenase compare
SMc01347 -1.5 -1.4 hypothetical protein compare
SMc02046 -1.4 -1.8 hypothetical protein compare
SMc00821 -1.4 -0.8 hypothetical protein compare
SMc01836 -1.4 -2.1 hypothetical protein compare
SMc04005 -1.4 -5.7 pyruvate kinase compare
SMa1101 -1.4 -2.0 hypothetical protein compare
SMc02850 -1.4 -2.3 DNA polymerase I compare
SMc04244 -1.4 -3.3 high-affinity zinc uptake system ATP-binding ABC transporter protein compare
SMc04239 -1.4 -2.3 hypothetical protein compare
SMc02985 -1.4 -0.9 hypothetical protein compare
SMa5033 -1.4 -1.2 hypothetical protein compare
SMc00914 -1.4 -1.8 oxidoreductase compare
SMa1597 -1.3 -2.6 Pilus assembly chaperone compare
SMc02362 -1.3 -1.5 cytochrome c-type biogenesis protein CcmE compare
SMc00412 -1.3 -0.9 orotidine 5'-phosphate decarboxylase compare
SMc02647 -1.3 -1.2 transcriptional regulator compare
SMa1770 -1.3 -1.4 hypothetical protein compare
SM_b20691 -1.3 -2.0 hypothetical protein compare
SMc00349 -1.3 -4.4 GTP-binding protein LepA compare
SMc00450 -1.3 -0.8 protoheme IX farnesyltransferase compare
SM_b20810 -1.3 -4.3 membrane-located cell surface saccharide acetylase compare
SMc00099 -1.3 -1.7 alkylphosphonate uptake protein compare
SMc02833 -1.3 -1.2 penicillin-insensitive murein endopeptidase compare
SMc01769 -1.3 -6.6 hypothetical protein compare
SMc02695 -1.3 -3.0 GTP-dependent nucleic acid-binding protein EngD compare
SMc00494 -1.2 -1.9 phosphoribosylformylglycinamidine synthase subunit PurS compare
SMc01770 -1.2 -1.9 serine hydroxymethyltransferase compare
SMc01124 -1.2 -4.9 PII uridylyl-transferase compare
SMc02640 -1.2 -1.2 UDP-glucuronic acid epimerase compare
SMc04327 -1.2 -0.8 hypothetical protein compare
SMc02107 -1.2 -1.1 hypothetical protein compare
SMc04088 -1.2 -6.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
SMc00959 -1.2 -2.0 hypothetical protein compare
SMc03158 -1.2 -2.1 ABC transporter permease compare
SMa1174 -1.2 -1.3 hypothetical protein compare
SMc02558 -1.1 -3.5 hypothetical protein compare
SMc02165 -1.1 -1.3 orotate phosphoribosyltransferase compare
SMc02155 -1.1 -7.1 hypothetical protein compare
SM_b21026 -1.1 -2.6 exopeptide compare
SMc04002 -1.1 -3.6 phosphoribosylaminoimidazole carboxylase ATPase subunit compare
SMc01441 -1.1 -2.1 membrane bound protease compare
SMc01004 -1.1 -6.2 phosphoribosyl-AMP cyclohydrolase compare
SMc00554 -1.1 -4.7 amidophosphoribosyltransferase compare
SMc04385 -1.1 -3.2 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) compare
SMc00614 -1.1 -4.3 phosphoribosylglycinamide formyltransferase compare
SMc02569 -1.1 -3.1 imidazole glycerol phosphate synthase subunit HisF compare
SMc00175 -1.0 -3.8 ABC transporter ATP-binding protein compare
SMc02077 -1.0 -2.0 exodeoxyribonuclease III protein compare
SMc02149 -1.0 -1.6 hypothetical protein compare
SM_b21177 -1.0 -4.0 phosphate uptake ABC transporter ATP-binding protein compare
SMc04001 -1.0 -1.0 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc03157 -1.0 -4.7 outer membrane lipoprotein transmembrane compare
SMc00013 -1.0 -1.3 cytochrome C oxidase subunit III transmembrane protein compare
SMc04382 -1.0 -8.5 beta-(1,2)-glucan production associated transmembrane protein compare
SM_b21176 -1.0 -2.8 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMa0326 -1.0 -1.9 short chain alcohol dehydrogenase-related dehydrogenase compare
SMc02983 -1.0 -3.2 ornithine, DAP, or arginine decarboxylase compare
SMc00166 -1.0 -0.9 oxidoreductase NAD protein compare
SMc00918 -1.0 -4.5 ATP phosphoribosyltransferase regulatory subunit compare
SM_b21397 -1.0 -1.5 hypothetical protein compare
SMc02055 -1.0 -1.1 phytoene synthase compare
SMa1232 -1.0 -2.8 NapC membrane-bound tetraheme cytochrome c subunit compare
SMc00647 -1.0 -2.9 ribosomal large subunit pseudouridine synthase compare
SMc02561 -1.0 -1.0 hypothetical protein compare
SMc00648 -1.0 -3.1 hypothetical protein compare
SMc02520 -1.0 -0.9 glycerol-3-phosphate dehydrogenase (EC 1.1.5.3) (from data) compare
SMc01112 -1.0 -3.8 hypothetical protein compare
SMc00176 -1.0 -3.4 hypothetical protein compare
SM_b20994 -1.0 -3.4 hypothetical protein compare
SMc00239 -1.0 -0.9 hypothetical protein compare
SMa0734 -0.9 -1.2 hypothetical protein compare
SMc02856 -0.9 -5.2 penicillin-binding protein compare
SMc00355 -0.9 -1.8 hypothetical protein compare
SMa0810 -0.9 -2.1 nitrogen fixation protein FixU compare
SMc01578 -0.9 -4.8 aspartate aminotransferase compare
SMc01206 -0.9 -1.0 queuine tRNA-ribosyltransferase compare
SMc03184 -0.9 -1.2 PH adaptation potassium efflux system G transmembrane protein compare
SMa0520 -0.9 -2.3 RpiR family transcriptional regulator compare
SMc04213 -0.9 -2.0 diacylglycerol kinase compare
SMc00458 -0.9 -4.7 transcriptional regulator compare
SMc00712 -0.9 -1.1 hypothetical protein compare
SMa0955 -0.9 -1.0 GntR family transcriptional regulator compare
SMa1639 -0.9 -1.2 hypothetical protein compare
SMc02897 -0.9 -1.2 cytochrome C transmembrane protein compare
SMc04174 -0.9 -1.6 signal peptide protein compare
SMa1160 -0.9 -2.7 hypothetical protein compare
SMc01930 -0.9 -1.1 hypothetical protein compare
SMc01540 -0.9 -1.8 hypothetical protein compare
SMc01850 -0.9 -1.0 hypothetical protein compare
SMc00298 -0.9 -2.0 methionine aminopeptidase compare
SMc00286 -0.9 -1.0 hemolysin-type calcium-binding protein compare
SMc02484 -0.9 -2.6 amino acid efflux transmembrane protein compare
SM_b21174 -0.9 -2.6 phosphate uptake ABC transporter permease compare
SMc02707 -0.9 -1.9 hypothetical protein compare
SMc01364 -0.9 -0.6 DNA topoisomerase I compare
SMc01036 -0.9 -1.5 hypothetical protein compare
SMc00993 -0.9 -5.4 phosphoribosylamine--glycine ligase compare
SMc00917 -0.8 -2.1 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
SMc00229 -0.8 -2.4 hypothetical protein compare
SM_b20414 -0.8 -1.7 hypothetical protein compare
SMa0663 -0.8 -1.5 hypothetical protein compare
SMc01099 -0.8 -1.0 tRNA pseudouridine synthase A compare
SMc00615 -0.8 -3.9 phosphoribosylaminoimidazole synthetase compare
SM_b20293 -0.8 -1.0 hypothetical protein compare
SMc00320 -0.8 -3.1 ribosome-binding factor A compare
SMc02570 -0.8 -3.9 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
SMc00514 -0.8 -1.5 monooxygenase compare
SMc02166 -0.8 -2.4 dihydroorotase compare
SMc02861 -0.8 -1.7 phosphate transporter compare
SMc01877 -0.8 -2.9 DNA repair protein compare
SMc01337 -0.8 -1.2 hypothetical protein compare
SMc02435 -0.8 -0.7 methyltransferase compare
SMc01360 -0.8 -0.5 aspartate carbamoyltransferase catalytic subunit compare
SM_b20303 -0.7 -1.7 hypothetical protein compare
SMc01147 -0.7 -1.2 coproporphyrinogen III oxidase compare
SM_b20897 -0.7 -1.1 hypothetical protein compare
SMc01613 -0.7 -2.8 ribose-5-phosphate isomerase B compare
SM_b21013 -0.7 -2.0 hypothetical protein compare
SMc00187 -0.7 -2.0 ubiquinol-cytochrome C reductase iron-sulfur subunit protein compare
SMc02941 -0.7 -1.7 hypothetical protein compare
SM_b20148 -0.7 -1.9 transcriptional regulator compare
SMc01153 -0.7 -1.2 enoyl-CoA hydratase compare
SMc02757 -0.7 -3.1 hypothetical protein compare
SMc02071 -0.7 -1.9 hydrolase glycosidase compare
SMa1917 -0.7 -1.4 hypothetical protein compare
SMc01768 -0.7 -2.2 transcriptional regulator compare
SMc00556 -0.7 -2.4 DNA repair protein RadA compare
SMc00177 -0.7 -2.3 hypothetical protein compare
SMc00189 -0.7 -2.5 cytochrome C1 protein compare
SMc04441 -0.7 -1.3 hypothetical protein compare
SMc00353 -0.7 -1.1 transmembrane protein compare
SM_b21479 -0.7 -0.8 hypothetical protein compare
SMc00241 -0.7 -1.3 transcriptional regulator compare
SMc01440 -0.7 -1.7 hydrolase serine protease transmembrane protein compare
SMa1704 -0.7 -2.3 hypothetical protein compare
SMc00488 -0.7 -5.1 phosphoribosylformylglycinamidine synthase II compare
SM_b21347 -0.7 -1.2 pectin degradation protein compare
SMa0775 -0.7 -1.6 hypothetical protein compare
SMa0995 -0.7 -1.5 TRm5 transposase compare
SM_b20904 -0.7 -1.1 sugar uptake ABC transporter ATP-binding protein compare
SM_b21156 -0.7 -1.8 hypothetical protein compare
SMc03183 -0.7 -3.4 monovalent cation/H+ antiporter subunit F compare
SM_b20302 -0.7 -1.5 hypothetical protein compare
SMc01220 -0.7 -1.4 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc00174 -0.6 -2.9 hypothetical protein compare
SMa0854 -0.6 -1.7 3-ketoacyl-ACP reductase compare
SMc03046 -0.6 -2.5 transcriptional regulator compare
SMc04296 -0.6 -0.5 cell division protein FtsZ compare
SMc04345 -0.6 -2.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Sinorhizobium meliloti 1021 in dmso control experiments

For dmso control Dimethyl Sulfoxide across organisms