Experiment set19IT080 for Pseudomonas fluorescens SBW25-INTG

Compare to:

Glucose (C) and Ammonium chloride (N); with MOPS; with PEG

200 most important genes:

  gene name fitness t score description  
PFLU_RS28385 -5.1 -10.9 homoserine O-acetyltransferase compare
PFLU_RS04465 -5.0 -6.9 ATP phosphoribosyltransferase compare
PFLU_RS20510 -4.8 -10.7 O-succinylhomoserine sulfhydrylase compare
PFLU_RS27370 -4.8 -10.7 anthranilate phosphoribosyltransferase compare
PFLU_RS20540 -4.7 -7.9 phosphoribosylanthranilate isomerase compare
PFLU_RS28390 -4.6 -11.9 methionine biosynthesis protein MetW compare
PFLU_RS27365 -4.6 -11.1 indole-3-glycerol phosphate synthase TrpC compare
PFLU_RS02590 -4.5 -7.5 ATP phosphoribosyltransferase regulatory subunit compare
PFLU_RS28165 -4.4 -10.3 methylenetetrahydrofolate reductase [NAD(P)H] compare
PFLU_RS01895 -4.4 -7.4 phosphoribosyl-ATP diphosphatase compare
PFLU_RS28695 -4.4 -10.1 phosphoglycerate dehydrogenase compare
PFLU_RS04470 -4.3 -7.2 histidinol dehydrogenase compare
PFLU_RS20575 -4.3 -7.7 3-isopropylmalate dehydratase small subunit compare
PFLU_RS03970 -4.3 -11.4 carboxylating nicotinate-nucleotide diphosphorylase compare
PFLU_RS20580 -4.2 -12.9 3-isopropylmalate dehydratase large subunit compare
PFLU_RS01620 -4.2 -5.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
PFLU_RS24025 -4.1 -12.4 quinolinate synthase NadA compare
PFLU_RS28535 -4.0 -17.4 dihydroxy-acid dehydratase compare
PFLU_RS01605 -4.0 -6.7 imidazoleglycerol-phosphate dehydratase HisB compare
PFLU_RS20565 -4.0 -15.9 3-isopropylmalate dehydrogenase compare
PFLU_RS00180 -3.9 -7.5 tryptophan synthase subunit beta compare
PFLU_RS00175 -3.9 -7.0 tryptophan synthase subunit alpha compare
PFLU_RS01900 -3.8 -6.8 phosphoribosyl-AMP cyclohydrolase compare
PFLU_RS25640 -3.6 -14.5 ketol-acid reductoisomerase compare
PFLU_RS18505 -3.5 -8.2 uroporphyrinogen-III C-methyltransferase compare
PFLU_RS25360 -3.3 -8.5 glutamate 5-kinase compare
PFLU_RS24765 -3.3 -21.3 2-isopropylmalate synthase compare
PFLU_RS25645 -3.2 -3.1 acetolactate synthase small subunit compare
PFLU_RS02490 -3.2 -15.0 phosphoserine phosphatase SerB compare
PFLU_RS20515 -3.2 -4.8 amidophosphoribosyltransferase compare
PFLU_RS29515 -3.1 -13.1 RidA family protein compare
PFLU_RS01610 -3.0 -10.9 imidazole glycerol phosphate synthase subunit HisH compare
PFLU_RS27650 -3.0 -6.1 biotin synthase BioB compare
PFLU_RS28655 -3.0 -13.3 HAD family hydrolase compare
PFLU_RS09055 -2.9 -2.0 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
PFLU_RS12975 -2.8 -4.9 DUF934 domain-containing protein compare
PFLU_RS29880 -2.7 -14.8 acetyl-CoA carboxylase biotin carboxylase subunit compare
PFLU_RS25750 -2.6 -4.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PFLU_RS29875 -2.6 -16.5 oxaloacetate decarboxylase subunit alpha compare
PFLU_RS12980 -2.5 -8.6 nitrite/sulfite reductase compare
PFLU_RS01625 -2.5 -1.7 imidazole glycerol phosphate synthase subunit HisF compare
PFLU_RS05690 -2.5 -2.4 Grx4 family monothiol glutaredoxin compare
PFLU_RS23590 -2.5 -3.2 gluconokinase compare
PFLU_RS28325 -2.5 -7.2 energy transducer TonB compare
PFLU_RS12450 -2.4 -9.9 cyclic peptide export ABC transporter compare
PFLU_RS29885 -2.3 -11.3 LysR family transcriptional regulator compare
PFLU_RS24330 -2.3 -4.6 phosphogluconate dehydratase compare
PFLU_RS22105 -2.3 -5.7 cysteine synthase CysM compare
PFLU_RS22740 -2.3 -3.4 phosphoadenylyl-sulfate reductase compare
PFLU_RS23585 -2.2 -8.5 GntP family permease compare
PFLU_RS21495 -2.2 -2.6 TlpA family protein disulfide reductase compare
PFLU_RS23305 -2.2 -10.8 arginine N-succinyltransferase compare
PFLU_RS04565 -2.2 -2.0 TMEM165/GDT1 family protein compare
PFLU_RS18395 -2.2 -2.5 MotA/TolQ/ExbB proton channel family protein compare
PFLU_RS23310 -2.0 -9.3 arginine/ornithine succinyltransferase subunit alpha compare
PFLU_RS07225 -2.0 -13.3 L-aspartate oxidase compare
PFLU_RS27475 -1.9 -4.2 symmetrical bis(5'-nucleosyl)-tetraphosphatase compare
PFLU_RS08410 -1.9 -8.5 HTH-type transcriptional regulator CysB compare
PFLU_RS27630 -1.9 -4.3 dethiobiotin synthase compare
PFLU_RS25735 -1.9 -4.4 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS18885 -1.8 -2.9 peptidyl-prolyl cis-trans isomerase compare
PFLU_RS13885 -1.8 -3.2 hypothetical protein compare
PFLU_RS01955 -1.8 -7.1 DUF971 domain-containing protein compare
PFLU_RS22070 -1.8 -3.6 phosphoribosylglycinamide formyltransferase compare
PFLU_RS24205 -1.7 -2.3 DNA binding protein compare
PFLU_RS18530 -1.7 -4.3 DNA translocase FtsK compare
PFLU_RS25760 -1.7 -4.8 glucose-6-phosphate isomerase compare
PFLU_RS25715 -1.7 -8.0 RNA polymerase-binding protein DksA compare
PFLU_RS08650 -1.7 -2.1 heme exporter protein CcmB compare
PFLU_RS02565 -1.6 -4.0 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
PFLU_RS27635 -1.6 -5.7 malonyl-ACP O-methyltransferase BioC compare
PFLU_RS24090 -1.6 -1.6 Holliday junction branch migration protein RuvA compare
PFLU_RS28195 -1.6 -8.5 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
PFLU_RS26290 -1.6 -1.2 2Fe-2S iron-sulfur cluster binding domain-containing protein compare
PFLU_RS23380 -1.6 -2.0 HAD-IB family hydrolase compare
PFLU_RS13085 -1.6 -3.4 DUF1315 family protein compare
PFLU_RS13540 -1.5 -2.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
PFLU_RS14550 -1.5 -6.0 UTP--glucose-1-phosphate uridylyltransferase GalU compare
PFLU_RS30590 -1.5 -1.9 hypothetical protein compare
PFLU_RS01670 -1.5 -6.8 protein-export chaperone SecB compare
PFLU_RS12915 -1.5 -3.1 methyltransferase domain-containing protein compare
PFLU_RS22095 -1.5 -11.0 GTP diphosphokinase compare
PFLU_RS23725 -1.5 -6.0 glucose-6-phosphate dehydrogenase compare
PFLU_RS17450 -1.5 -6.2 carboxynorspermidine decarboxylase compare
PFLU_RS04140 -1.5 -1.9 response regulator transcription factor compare
PFLU_RS27645 -1.5 -7.4 8-amino-7-oxononanoate synthase compare
PFLU_RS08675 -1.4 -2.5 DsbE family thiol:disulfide interchange protein compare
PFLU_RS12445 -1.4 -9.7 TonB-dependent siderophore receptor compare
PFLU_RS03610 -1.4 -4.5 redox-regulated ATPase YchF compare
PFLU_RS31675 -1.4 -3.0 hypothetical protein compare
PFLU_RS27380 -1.4 -7.8 anthranilate synthase component I compare
PFLU_RS08665 -1.4 -3.0 cytochrome c maturation protein CcmE compare
PFLU_RS21360 -1.4 -1.4 MarR family transcriptional regulator compare
PFLU_RS30165 -1.4 -6.1 ParA family protein compare
PFLU_RS27640 -1.4 -2.2 alpha/beta fold hydrolase compare
PFLU_RS25205 -1.3 -4.0 cytochrome o ubiquinol oxidase subunit IV compare
PFLU_RS19910 -1.3 -2.6 hypothetical protein compare
PFLU_RS24720 -1.3 -6.0 trehalose operon repressor compare
PFLU_RS24125 -1.3 -3.3 cold-shock protein compare
PFLU_RS28320 -1.3 -1.8 glutathione synthase compare
PFLU_RS12260 -1.3 -1.7 hypothetical protein compare
PFLU_RS05630 -1.3 -1.7 amino acid ABC transporter ATP-binding protein compare
PFLU_RS20695 -1.3 -8.3 M4 family metallopeptidase compare
PFLU_RS19175 -1.3 -5.9 trigger factor compare
PFLU_RS27375 -1.3 -4.2 aminodeoxychorismate/anthranilate synthase component II compare
PFLU_RS22645 -1.3 -8.9 EamA family transporter compare
PFLU_RS20345 -1.2 -3.3 hypothetical protein compare
PFLU_RS19420 -1.2 -4.4 sigma-70 family RNA polymerase sigma factor compare
PFLU_RS24805 -1.2 -4.0 helix-turn-helix domain-containing protein compare
PFLU_RS25210 -1.2 -3.1 cytochrome o ubiquinol oxidase subunit III compare
PFLU_RS02980 -1.2 -1.6 precorrin-8X methylmutase compare
PFLU_RS07255 -1.2 -3.1 sulfurtransferase TusA family protein compare
PFLU_RS20955 -1.2 -1.8 DUF1028 domain-containing protein compare
PFLU_RS29550 -1.1 -4.0 ATP-dependent DNA helicase RecG compare
PFLU_RS29275 -1.1 -4.2 DUF484 family protein compare
PFLU_RS18755 -1.1 -5.2 TetR/AcrR family transcriptional regulator compare
PFLU_RS24160 -1.1 -4.2 HAMP domain-containing protein compare
PFLU_RS30160 -1.1 -2.2 ParB/RepB/Spo0J family partition protein compare
PFLU_RS07645 -1.1 -3.3 hypothetical protein compare
PFLU_RS02670 -1.1 -2.8 hypothetical protein compare
PFLU_RS12840 -1.1 -2.0 3-hydroxybutyrate dehydrogenase compare
PFLU_RS18675 -1.1 -1.7 NADH-quinone oxidoreductase subunit NuoN compare
PFLU_RS08670 -1.0 -3.5 heme lyase CcmF/NrfE family subunit compare
PFLU_RS29560 -1.0 -1.7 hypothetical protein compare
PFLU_RS25815 -1.0 -1.6 transcription termination/antitermination protein NusA compare
PFLU_RS15790 -1.0 -3.2 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
PFLU_RS25215 -1.0 -5.5 cytochrome o ubiquinol oxidase subunit I compare
PFLU_RS13035 -1.0 -2.2 cobalamin biosynthesis protein CobW compare
PFLU_RS15810 -1.0 -2.5 hypothetical protein compare
PFLU_RS04835 -1.0 -1.3 hypothetical protein compare
PFLU_RS03765 -1.0 -5.5 sulfate adenylyltransferase subunit CysD compare
PFLU_RS01645 -1.0 -6.8 S41 family peptidase compare
PFLU_RS31290 -1.0 -1.6 EamA family transporter compare
PFLU_RS20700 -1.0 -6.2 DNA/RNA non-specific endonuclease compare
PFLU_RS26635 -1.0 -4.4 D-alanyl-D-alanine carboxypeptidase compare
PFLU_RS15310 -1.0 -1.6 YgdI/YgdR family lipoprotein compare
PFLU_RS28470 -1.0 -3.0 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
PFLU_RS00195 -1.0 -2.1 dodecin domain-containing protein compare
PFLU_RS05250 -1.0 -2.4 elongation factor 4 compare
PFLU_RS18655 -1.0 -1.2 NADH-quinone oxidoreductase subunit J compare
PFLU_RS02365 -1.0 -6.0 glycosyltransferase compare
PFLU_RS15755 -1.0 -2.1 type II secretion system protein M compare
PFLU_RS08505 -1.0 -5.1 protease HtpX compare
PFLU_RS25200 -1.0 -4.4 protoheme IX farnesyltransferase compare
PFLU_RS02975 -1.0 -4.9 precorrin-3B synthase compare
PFLU_RS12210 -1.0 -1.9 hypothetical protein compare
PFLU_RS29365 -1.0 -6.6 cupin domain-containing protein compare
PFLU_RS18250 -0.9 -2.4 DUF2160 domain-containing protein compare
PFLU_RS25740 -0.9 -3.6 polynucleotide adenylyltransferase PcnB compare
PFLU_RS16300 -0.9 -2.5 hypothetical protein compare
PFLU_RS02625 -0.9 -6.3 ribonuclease R compare
PFLU_RS31490 -0.9 -1.5 hypothetical protein compare
PFLU_RS09535 -0.9 -1.4 TIGR03750 family conjugal transfer protein compare
PFLU_RS31475 -0.9 -2.1 hypothetical protein compare
PFLU_RS25220 -0.9 -4.4 ubiquinol oxidase subunit II compare
PFLU_RS01615 -0.9 -2.0 DUF2164 domain-containing protein compare
PFLU_RS28310 -0.9 -1.1 response regulator compare
PFLU_RS23070 -0.9 -0.8 50S ribosomal protein L32 compare
PFLU_RS08660 -0.9 -1.5 heme exporter protein CcmD compare
PFLU_RS30570 -0.9 -3.2 IS5/IS1182 family transposase compare
PFLU_RS14820 -0.9 -2.8 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
PFLU_RS25730 -0.9 -6.2 PAS domain S-box protein compare
PFLU_RS00870 -0.9 -1.7 hypothetical protein compare
PFLU_RS14250 -0.9 -3.0 MFS transporter compare
PFLU_RS04015 -0.8 -1.4 1-phosphofructokinase compare
PFLU_RS15275 -0.8 -2.2 hypothetical protein compare
PFLU_RS31840 -0.8 -1.7 hypothetical protein compare
PFLU_RS30485 -0.8 -1.8 hypothetical protein compare
PFLU_RS28270 -0.8 -1.0 triphosphoribosyl-dephospho-CoA synthase compare
PFLU_RS04070 -0.8 -1.9 peptide chain release factor 3 compare
PFLU_RS07280 -0.8 -5.8 outer membrane protein assembly factor BamC compare
PFLU_RS02970 -0.8 -3.0 bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase compare
PFLU_RS12660 -0.8 -3.3 hypothetical protein compare
PFLU_RS28420 -0.8 -4.7 thiazole synthase compare
PFLU_RS30825 -0.8 -2.9 hypothetical protein compare
PFLU_RS03770 -0.8 -5.5 sulfate adenylyltransferase subunit CysN compare
PFLU_RS19855 -0.8 -1.7 DUF4398 domain-containing protein compare
PFLU_RS02990 -0.8 -3.2 precorrin-3B C(17)-methyltransferase compare
PFLU_RS11885 -0.8 -1.2 type II secretion system protein M compare
PFLU_RS21315 -0.8 -3.3 GTP cyclohydrolase I FolE compare
PFLU_RS28965 -0.8 -4.0 5-formyltetrahydrofolate cyclo-ligase compare
PFLU_RS29290 -0.8 -2.1 hypothetical protein compare
PFLU_RS03645 -0.8 -4.9 tetratricopeptide repeat protein compare
PFLU_RS10955 -0.8 -2.8 peptide-methionine (S)-S-oxide reductase MsrA compare
PFLU_RS07655 -0.8 -3.6 acetyl-CoA C-acyltransferase FadA compare
PFLU_RS02310 -0.8 -3.6 LPS kinase compare
PFLU_RS19160 -0.8 -4.5 endopeptidase La compare
PFLU_RS13640 -0.8 -1.6 isochorismatase family protein compare
PFLU_RS17130 -0.8 -2.7 protein BatD compare
PFLU_RS05230 -0.8 -2.0 DNA polymerase III subunit chi compare
PFLU_RS04395 -0.8 -2.8 ribosome-associated translation inhibitor RaiA compare
PFLU_RS14810 -0.8 -1.5 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
PFLU_RS24335 -0.8 -5.3 type I glyceraldehyde-3-phosphate dehydrogenase compare
PFLU_RS17080 -0.8 -1.8 FadR family transcriptional regulator compare
PFLU_RS15410 -0.8 -0.9 zinc-dependent alcohol dehydrogenase family protein compare
PFLU_RS16500 -0.8 -2.8 DMT family transporter compare
PFLU_RS24085 -0.8 -0.7 Holliday junction branch migration DNA helicase RuvB compare
PFLU_RS17815 -0.7 -1.5 response regulator compare
PFLU_RS13040 -0.7 -5.2 cobaltochelatase subunit CobN compare
PFLU_RS29735 -0.7 -5.0 HlyC/CorC family transporter compare


Specific Phenotypes

For 1 genes in this experiment

For stress D-Glucose in Pseudomonas fluorescens SBW25-INTG

For stress D-Glucose across organisms