Experiment set19IT038 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Post-colonization (Day 14) - Cage2;Mouse2

200 most important genes:

  gene name fitness t score description  
BT3821 -5.7 -3.9 5,10-methylenetetrahydrofolate reductase (NCBI ptt file) compare
BT3688 -5.1 -6.0 putative acetyltransferase (NCBI ptt file) compare
BT1607 -4.9 -3.4 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase (NCBI ptt file) compare
p5482_02 -4.5 -4.3 hypothetical protein (NCBI) compare
BT3933 -4.5 -5.3 prephenate dehydrogenase (EC 1.3.1.13) (from data) compare
BT3733 -4.4 -5.3 arginosuccinate lyase (EC 4.3.2.1) (from data) compare
BT1843 -4.2 -2.9 adenylosuccinate synthetase (NCBI ptt file) compare
BT0892 -4.1 -2.5 dihydroorotate dehydrogenase (NCBI ptt file) compare
BT3320 -4.1 -4.8 dihydrodipicolinate reductase (NCBI ptt file) compare
BT2396 -4.0 -2.8 putative membrane transporter involved in nicotinamide mononucleotide transport (NCBI ptt file) compare
BT2386 -3.9 -7.0 AsnC family transcriptional regulator (NCBI ptt file) compare
BT2403 -3.9 -7.0 aspartate kinase / homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) compare
BT2798 -3.9 -12.6 carboxy-terminal processing protease precursor (NCBI ptt file) compare
BT0555 -3.8 -3.7 amidophosphoribosyltransferase (NCBI ptt file) compare
BT2167 -3.8 -5.8 elongation factor G (NCBI ptt file) compare
BT1758 -3.7 -2.6 fructose transporter (from data) compare
BT1374 -3.7 -2.6 diaminopimelate decarboxylase (EC 4.1.1.20) (from data) compare
BT1953 -3.7 -2.6 putative TonB-linked outer membrane receptor (NCBI ptt file) compare
BT1957 -3.7 -5.1 hypothetical protein (NCBI ptt file) compare
BT1757 -3.7 -5.4 fructokinase (NCBI ptt file) compare
BT1746 -3.7 -2.2 conserved hypothetical protein (NCBI ptt file) compare
BT4049 -3.6 -2.5 putative ArgK protein with ATPase and kinase domains (NCBI ptt file) compare
BT0180 -3.6 -4.9 5-methyltetrahydrofolate-homocysteine methyltransferase (NCBI ptt file) compare
BT0155 -3.6 -3.5 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) compare
BT3894 -3.6 -4.2 putative methyltransferase (NCBI ptt file) compare
BT0350 -3.5 -4.2 ribulokinase (EC 2.7.1.16) (from data) compare
BT0370 -3.5 -2.4 galactokinase (NCBI ptt file) compare
BT0700 -3.4 -2.4 GTP pyrophosphokinase (NCBI ptt file) compare
BT0146 -3.4 -5.7 unsaturated glucuronyl hydrolase (NCBI ptt file) compare
BT3712 -3.4 -3.3 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) compare
BT1375 -3.4 -4.0 aspartokinase (NCBI ptt file) compare
BT1954 -3.3 -2.3 putative surface layer protein (NCBI ptt file) compare
BT4305 -3.3 -7.1 putative alpha-amylase (NCBI ptt file) compare
BT0156 -3.3 -2.3 transcriptional regulator (NCBI ptt file) compare
BT1857 -3.3 -5.9 3-isopropylmalate dehydrogenase (NCBI ptt file) compare
BT3717 -3.3 -3.2 N-succinylornithine carbamoyltransferase (EC 2.1.3.11) (from data) compare
BT4265 -3.3 -2.3 GMP synthase (glutamine-hydrolyzing) (NCBI ptt file) compare
BT0875 -3.3 -4.5 beta-ureidopropionase (NCBI ptt file) compare
BT4667 -3.3 -8.5 beta-galactosidase (NCBI ptt file) compare
BT0185 -3.3 -2.0 conserved hypothetical protein (NCBI ptt file) compare
BT0353 -3.3 -5.0 putative sugar epimerase/aldolase (NCBI ptt file) compare
BT1355 -3.2 -4.4 hypothetical protein (NCBI ptt file) compare
BT4300 -3.2 -2.2 transcription regulator, CRP family (NCBI ptt file) compare
BT4304 -3.2 -10.5 putative glycosyltransferase (NCBI ptt file) compare
BT4041 -3.2 -4.3 conserved hypothetical protein (NCBI ptt file) compare
BT3072 -3.2 -3.1 collagenase precursor (NCBI ptt file) compare
BT3253 -3.2 -2.2 phosphoribosylamine--glycine ligase (NCBI ptt file) compare
BT1733 -3.1 -2.2 putative phosphoribosylformylglycinamidine synthase (NCBI ptt file) compare
BT0527 -3.1 -2.1 tryptophan synthase alpha chain (NCBI ptt file) compare
BT1068 -3.1 -2.1 hypothetical protein (NCBI ptt file) compare
BT2977 -3.0 -9.9 peptidylprolyl isomerase (NCBI ptt file) compare
BT4211 -3.0 -2.1 putative phosphoribosylformylglycinamidine cyclo-ligase (NCBI ptt file) compare
BT3981 -3.0 -2.1 hypothetical protein (NCBI ptt file) compare
BT0556 -3.0 -2.1 carbamoyl phosphate synthetase III (glutamine-hydrolyzing) (NCBI ptt file) compare
BT2413 -3.0 -6.7 homoserine O-succinyltransferase (NCBI ptt file) compare
BT1859 -3.0 -4.5 3-isopropylmalate dehydratase small subunit (NCBI ptt file) compare
BT_2008 -3.0 -1.7 hypothetical protein (RefSeq) compare
BT2387 -2.9 -9.0 O-acetylhomoserine (thiol)-lyase (NCBI ptt file) compare
BT1956 -2.9 -2.9 putative cell surface protein (NCBI ptt file) compare
BT2415 -2.9 -10.3 aspartate aminotransferase (NCBI ptt file) compare
BT4644 -2.9 -2.0 putative anti-sigma factor (NCBI ptt file) compare
BT1955 -2.9 -4.5 putative cell wall biogenesis protein (NCBI ptt file) compare
BT4572 -2.9 -7.2 enolase (NCBI ptt file) compare
BT1747 -2.9 -2.0 pyruvate-flavodoxin oxidoreductase (NCBI ptt file) compare
BT2146 -2.9 -9.7 4-alpha-glucanotransferase (NCBI ptt file) compare
BT3935 -2.9 -2.8 aminotransferase (NCBI ptt file) compare
BT1536 -2.9 -2.8 ABC transporter permease (NCBI ptt file) compare
BT0891 -2.9 -2.0 dihydroorotate dehydrogenase electron transfer subunit (NCBI ptt file) compare
BT1270 -2.9 -4.4 putative Na+/H+ antiporter (NCBI ptt file) compare
BT0557 -2.8 -6.6 carbamyl phosphate synthetase (NCBI ptt file) compare
BT0548 -2.8 -2.0 diaminopimelate epimerase (NCBI ptt file) compare
BT0249 -2.8 -1.9 5-methyltetrahydrofolate--homocysteine methyltransferase or methionine synthase (NCBI ptt file) compare
BT2938 -2.8 -2.7 putative glycosyltransferase (NCBI ptt file) compare
BT0351 -2.8 -3.3 L-arabinose isomerase (NCBI ptt file) compare
BT1952 -2.7 -7.0 Fe3+ ABC transporter, periplasmic iron-binding protein (NCBI ptt file) compare
BT1860 -2.7 -4.1 3-isopropylmalate dehydratase large subunit (NCBI ptt file) compare
BT4322 -2.6 -1.8 conserved hypothetical protein, with a diacylglycerol kinase catalytic domain (NCBI ptt file) compare
BT0035 -2.6 -1.7 hypothetical protein (NCBI ptt file) compare
BT3195 -2.6 -4.3 conserved hypothetical protein (NCBI ptt file) compare
BT0177 -2.6 -1.8 hypothetical protein (NCBI ptt file) compare
BT4720 -2.6 -2.5 putative RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT4303 -2.6 -11.9 glycogen debranching enzyme-related protein (4-alpha-glucanotransferase) (NCBI ptt file) compare
BT4599 -2.6 -4.8 putative transcriptional regulator (NCBI ptt file) compare
BT0771 -2.5 -1.7 1,4-alpha-glucan branching enzyme (isoamylase or pullulanase type II) (NCBI ptt file) compare
BT4191 -2.5 -3.0 hypothetical protein (NCBI ptt file) compare
BT4174 -2.5 -4.8 conserved hypothetical protein (NCBI ptt file) compare
BT3758 -2.5 -4.0 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) compare
BT1339 -2.5 -4.7 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase (NCBI ptt file) compare
BT2467 -2.5 -4.4 hypothetical protein (NCBI ptt file) compare
BT1530 -2.5 -2.9 putative outer membrane protein OprM precursor (NCBI ptt file) compare
BT3342 -2.4 -1.7 hypothetical protein (NCBI ptt file) compare
BT3819 -2.4 -2.7 conserved hypothetical protein (NCBI ptt file) compare
BT3912 -2.4 -2.9 conserved hypothetical protein (NCBI ptt file) compare
BT1340 -2.4 -4.0 putative lipopolysaccharide biosynthesis glycosyltransferase (NCBI ptt file) compare
BT1343 -2.4 -2.9 putative capsule biosynthesis protein (NCBI ptt file) compare
BT3936 -2.4 -1.7 prephenate and/or arogenate dehydratase (EC 4.2.1.51) (from data) compare
BT1222 -2.4 -1.6 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) compare
BT1347 -2.4 -2.3 conserved hypothetical protein (NCBI ptt file) compare
BT0831 -2.4 -11.2 ATP-dependent RNA helicase (NCBI ptt file) compare
BT1564 -2.4 -1.6 conserved hypothetical protein (NCBI ptt file) compare
BT4193 -2.4 -6.3 dipeptidyl peptidase IV (NCBI ptt file) compare
BT0122 -2.3 -4.1 3-oxoacyl-[acyl-carrier-protein] synthase III (NCBI ptt file) compare
BT2153 -2.3 -2.2 putative Fe-S oxidoreductases (NCBI ptt file) compare
BT4028 -2.3 -1.2 hypothetical protein (NCBI ptt file) compare
BT1221 -2.3 -1.6 glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) compare
BT4658 -2.3 -3.8 glucuronyl hydrolase (NCBI ptt file) compare
BT0954 -2.3 -4.1 conserved hypothetical protein (NCBI ptt file) compare
BT1346 -2.3 -2.2 capsule biosynthesis protein capA (NCBI ptt file) compare
BT1951 -2.3 -3.1 Fe3+ ABC transporter, permease protein (NCBI ptt file) compare
BT2944 -2.3 -4.6 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT1345 -2.3 -2.2 glycosyltransferase (NCBI ptt file) compare
BT4103 -2.3 -3.8 putative Sec-independent protein translocase (NCBI ptt file) compare
BT1354 -2.3 -3.4 putative flippase (NCBI ptt file) compare
BT2090 -2.2 -7.9 methylmalonyl-CoA mutase large subunit (NCBI ptt file) compare
BT1356 -2.2 -2.2 putative capsule polysaccharide export protein (NCBI ptt file) compare
BT0728 -2.2 -3.0 transcriptional regulator (NCBI ptt file) compare
BT2185 -2.2 -4.2 hypothetical protein (NCBI ptt file) compare
BT1154 -2.2 -2.1 ATP-independent RNA helicase (NCBI ptt file) compare
BT2059 -2.2 -1.5 TonB (NCBI ptt file) compare
BT4341 -2.2 -6.3 hypothetical protein (NCBI ptt file) compare
BT1220 -2.2 -1.5 6-phosphogluconolactonase (NCBI ptt file) compare
BT2145 -2.2 -8.2 ribonucleoside-diphosphate reductase alpha chain (NCBI ptt file) compare
BT0352 -2.1 -1.5 conserved hypothetical protein (NCBI ptt file) compare
BT3704 SusA -2.1 -6.8 SusA: alpha-amylase / neopullulanase / cyclomaltodextrinase (EC 3.2.1.135; EC 3.2.1.54) (from data) compare
BT1844 -2.1 -4.0 transcriptional regulator, putative iron uptake regulation protein (NCBI ptt file) compare
BT3462 -2.1 -2.9 TPR domain protein (NCBI ptt file) compare
BT1153 -2.1 -5.4 phosphoserine aminotransferase (NCBI ptt file) compare
BT0355 -2.1 -3.5 L-arabinose/L-arabinobiose symporter (from data) compare
BT4570 -2.1 -4.6 hypothetical protein (NCBI ptt file) compare
BT0356 -2.1 -2.8 aldose 1-epimerase precursor (NCBI ptt file) compare
BT2945 -2.1 -7.0 UDP-N-acetyl-D-mannosamine dehydrogenase (NCBI ptt file) compare
BT2091 -2.1 -6.7 methylmalonyl-CoA mutase small subunit (NCBI ptt file) compare
BT0738 -2.1 -4.1 serine hydroxymethyltransferase (NCBI ptt file) compare
BT4700 -2.1 -3.1 isochorismate synthase entC (NCBI ptt file) compare
BT3550 -2.0 -3.6 putative long-chain-fatty-acid--CoA ligase (NCBI ptt file) compare
BT0397 -2.0 -1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0619 -2.0 -1.4 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfD (NCBI ptt file) compare
BT0973 -2.0 -2.7 hypothetical protein (NCBI ptt file) compare
BT1342 -2.0 -3.8 putative UDP-glucuronic acid epimerase (NCBI ptt file) compare
BT2741 -2.0 -3.0 sigma-54 modulation protein (NCBI ptt file) compare
BT2042 -2.0 -2.2 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) compare
BT4551 -2.0 -1.4 putative GTPase, ThdF family (NCBI ptt file) compare
BT3260 -2.0 -1.3 DNA polymerase I (NCBI ptt file) compare
BT2899 -2.0 -10.3 hypothetical protein (NCBI ptt file) compare
BT4562 -1.9 -1.8 hypothetical protein (NCBI ptt file) compare
BT2787 -1.9 -11.9 GTP-binding elongation factor family protein TypA/BipA (NCBI ptt file) compare
BT1871 -1.9 -8.9 putative alpha-glucosidase (NCBI ptt file) compare
BT0256 -1.9 -3.6 hypothetical protein (NCBI ptt file) compare
BT2103 -1.9 -3.6 transcriptional regulator (NCBI ptt file) compare
BT0621 -1.9 -2.2 Na+-transporting NADH:ubiquinone oxidoreductase, Electron transport complex protein rnfE (NCBI ptt file) compare
BT1854 -1.9 -1.3 putative membrane-associated phospholipid phosphatase (NCBI ptt file) compare
BT0411 -1.9 -3.3 CysQ, sulfite synthesis pathway protein (NCBI ptt file) compare
BT0258 -1.8 -8.2 glucosamine-6-phosphate isomerase (NCBI ptt file) compare
BT4255 -1.8 -3.6 DNA replication and repair protein RecF, ABC family ATPase (NCBI ptt file) compare
BT2136 -1.8 -3.5 putative purple acid phosphatase (NCBI ptt file) compare
BT0578 -1.8 -5.6 excinuclease ABC subunit A (NCBI ptt file) compare
BT3549 -1.8 -6.2 N-succinylcitrulline desuccinylase (EC 3.5.1.-) (from data) compare
BT1976 -1.8 -1.9 hypothetical protein (NCBI ptt file) compare
BT0238 -1.8 -4.3 transcriptional regulator (NCBI ptt file) compare
BT3043 -1.8 -7.0 putative xylanase (NCBI ptt file) compare
BT1348 -1.8 -1.7 CDP-abequose synthase (NCBI ptt file) compare
BT2438 -1.8 -6.5 hypothetical protein (NCBI ptt file) compare
BT1358 -1.8 -2.4 putative transcriptional regulator (NCBI ptt file) compare
BT1351 -1.8 -1.2 glucose-1-phosphate cytidylyltransferase (NCBI ptt file) compare
BT0570 -1.8 -4.6 excinuclease ABC subunit B (NCBI ptt file) compare
BT1689 -1.8 -2.1 oxaloacetate decarboxylase beta chain (NCBI ptt file) compare
BT3363 -1.7 -1.2 lipopolysaccharide core biosynthesis protein LpsA (NCBI ptt file) compare
BT3249 -1.7 -6.4 putative zinc ABC transporter, zinc-binding protein (NCBI ptt file) compare
BT1352 -1.7 -3.3 putative glycosyltransferase HI1698 (NCBI ptt file) compare
BT2155 -1.7 -4.7 hypothetical protein (NCBI ptt file) compare
BT1558 -1.7 -3.9 hypothetical protein (NCBI ptt file) compare
BT4416 -1.7 -3.6 Cu2+ homeostasis protein CutC (NCBI ptt file) compare
BT1524 -1.7 -2.0 hypothetical protein (NCBI ptt file) compare
BT3405 -1.7 -3.0 conserved hypothetical protein (NCBI ptt file) compare
BT1081 -1.7 -2.1 recombination protein recR (NCBI ptt file) compare
BT0367 -1.7 -5.0 putative endo-arabinase (NCBI ptt file) compare
BT1739 -1.7 -9.5 excinuclease ABC subunit A (NCBI ptt file) compare
BT3268 -1.7 -1.2 glucose-inhibited division protein A (NCBI ptt file) compare
BT1439 -1.7 -5.5 Outer membrane binding protein for vancomycin (SusD-like) (from data) compare
BT1759 -1.7 -3.1 levanase precursor (2,6-beta-D-fructofuranosidase) (NCBI ptt file) compare
BT0547 -1.7 -4.5 aspartate aminotransferase (NCBI ptt file) compare
BT0900 -1.7 -1.1 putative tetratricopeptide repeat family protein (NCBI ptt file) compare
BT1089 -1.6 -4.1 lipoate-protein ligase B (NCBI ptt file) compare
BT3759 -1.6 -7.5 N-succinylglutamylphosphate reductase (EC 1.2.1.-) (from data) compare
BT1145 -1.6 -1.9 glucose-inhibited division protein (NCBI ptt file) compare
BT4192 -1.6 -5.2 lipoic acid synthetase (NCBI ptt file) compare
BT2236 -1.6 -1.7 conserved hypothetical protein (NCBI ptt file) compare
BT4610 -1.6 -2.1 RecA (NCBI ptt file) compare
BT4349 -1.6 -2.9 hypothetical protein (NCBI ptt file) compare
BT2841 -1.6 -1.9 pyruvate kinase (NCBI ptt file) compare
BT2344 -1.6 -1.9 hypothetical protein (NCBI ptt file) compare
BT2742 -1.6 -0.8 integrase, site-specific recombinase (NCBI ptt file) compare
BT3223 -1.6 -3.1 hypothetical protein (NCBI ptt file) compare
BT4025 -1.6 -1.5 hypothetical protein (NCBI ptt file) compare
BT1561 -1.5 -1.2 hypothetical protein (NCBI ptt file) compare
BT3760 -1.5 -4.5 arginosuccinate synthetase (EC 6.3.4.5) (from data) compare
BT1344 -1.5 -4.0 putative glycosyltransferase (NCBI ptt file) compare
BT4557 -1.5 -5.6 hypothetical protein (NCBI ptt file) compare
BT0437 -1.5 -1.4 N-acylglucosamine 2-epimerase (NCBI ptt file) compare
BT1515 -1.5 -2.5 conserved hypothetical protein (NCBI ptt file) compare


Specific Phenotypes

For 5 genes in this experiment