Experiment set19IT038 for Bacteroides thetaiotaomicron VPI-5482

Compare to:

Post-colonization (Day 14) - Cage2;Mouse2

200 most detrimental genes:

  gene name fitness t score description  
BT2744 +5.5 28.6 acetyltransferase (NCBI ptt file) compare
BT2853 +5.0 2.3 hypothetical protein (NCBI ptt file) compare
BT2760 +4.1 7.6 conserved hypothetical protein (NCBI ptt file) compare
BT1876 +4.0 7.7 putative anti-sigma factor (NCBI ptt file) compare
BT1874 +3.5 7.4 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT2743 +3.5 12.5 putative aminopeptidase (NCBI ptt file) compare
BT3974 +3.2 11.5 conserved hypothetical protein (NCBI ptt file) compare
BT1872 +3.2 4.6 periplasmic beta-glucosidase precursor (NCBI ptt file) compare
BT0414 +3.0 2.5 sulfate adenylyltransferase subunit 2 (NCBI ptt file) compare
BT2856 +2.8 5.1 hypothetical protein (NCBI ptt file) compare
BT1873 +2.7 3.9 endo-arabinase (NCBI ptt file) compare
BT1197 +2.7 9.4 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT3133 +2.6 7.3 alpha-galactosidase (NCBI ptt file) compare
BT3738 +2.6 21.0 two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) compare
BT3270 +2.2 8.7 putative anti-sigma factor (NCBI ptt file) compare
BT3262 +2.2 9.3 hypothetical protein (NCBI ptt file) compare
BT3832 +2.0 6.1 conserved hypothetical protein (NCBI ptt file) compare
BT3701 SusD +2.0 13.7 SusD, outer membrane protein (NCBI ptt file) compare
BT0902 +1.9 5.7 hypothetical protein (NCBI ptt file) compare
BT3705 SusR +1.9 11.5 regulatory protein SusR (NCBI ptt file) compare
BT0671 +1.9 2.3 outer membrane protein TolC, putative (NCBI ptt file) compare
BT2857 +1.8 4.8 hypothetical protein (NCBI ptt file) compare
BT2854 +1.8 5.3 periplasmic beta-glucosidase precursor (NCBI ptt file) compare
BT3702 SusC +1.8 12.7 SusC, outer membrane protein involved in starch binding (NCBI ptt file) compare
BT1877 +1.8 3.7 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT2006 +1.8 3.4 hypothetical protein (NCBI ptt file) compare
BT0316 +1.7 10.2 putative hemin receptor (NCBI ptt file) compare
BT3213 +1.7 3.3 tRNA pseudouridine synthase B (NCBI ptt file) compare
BT1920 +1.7 6.8 hypothetical protein (NCBI ptt file) compare
BT3700 SusE +1.7 8.8 SusE: Outer membrane amylopectin-binding protein (from data) compare
BT0531 +1.7 3.4 anthranilate synthase component II (NCBI ptt file) compare
BT2072 +1.6 6.9 aconitate hydratase (NCBI ptt file) compare
BT1875 +1.6 5.7 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT3703 SusB +1.6 8.5 alpha-glucosidase SusB (NCBI ptt file) compare
BT1200 +1.6 5.9 hypothetical protein (NCBI ptt file) compare
BT1071 +1.6 2.2 hypothetical protein (NCBI ptt file) compare
BT0402 +1.5 3.8 hypothetical protein (NCBI ptt file) compare
BT1371 +1.5 5.2 2-amino-3-ketobutyrate coenzyme A ligase (NCBI ptt file) compare
BT2039 +1.5 4.6 cation efflux system protein, AcrB/AcrD/AcrF family protein (NCBI ptt file) compare
BT0160 +1.5 4.3 hypothetical protein (NCBI ptt file) compare
BT1804 +1.4 3.6 electron transfer flavoprotein beta-subunit (NCBI ptt file) compare
BT4672 +1.4 3.8 hypothetical protein (NCBI ptt file) compare
BT0543 +1.4 5.7 glutamine synthetase (NCBI ptt file) compare
BT0215 +1.4 1.9 iron uptake regulatory protein (NCBI ptt file) compare
BT1272 +1.4 5.7 FucR (NCBI ptt file) compare
BT0833 +1.4 2.7 conserved hypothetical protein (NCBI ptt file) compare
BT1868 +1.4 1.3 conserved hypothetical protein (NCBI ptt file) compare
BT0337 +1.3 3.0 conserved hypothetical protein (NCBI ptt file) compare
BT0749 +1.3 5.3 putative two-component system sensor histidine kinase (NCBI ptt file) compare
BT0545 +1.3 2.8 nitrogen regulatory protein P-II (NCBI ptt file) compare
BT3251 +1.3 6.9 conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) compare
BT1370 +1.3 3.4 NAD dependent nucleotide-diphosphate-sugar epimerase (NCBI ptt file) compare
BT0654 +1.3 6.5 two-component sensor histidine kinase (NCBI ptt file) compare
BT4123 +1.3 8.8 exo-poly-alpha-D-galacturonosidase precursor (NCBI ptt file) compare
BT2546 +1.2 2.2 transcriptional regulator (NCBI ptt file) compare
BT0532 +1.2 5.1 anthranilate synthase component I (NCBI ptt file) compare
BT2302 +1.2 1.4 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT0944 +1.2 2.6 hypothetical protein (NCBI ptt file) compare
BT3132 +1.2 3.5 sialic acid-specific 9-O-acetylesterase (NCBI ptt file) compare
BT1198 +1.2 3.5 LemA protein (NCBI ptt file) compare
BT4693 +1.2 1.8 cation efflux system protein (NCBI ptt file) compare
BT3211 +1.2 1.6 conserved hypothetical protein (NCBI ptt file) compare
BT3349 +1.2 2.0 chondroitin disaccharide sulfatase (from data) compare
BT0443 +1.2 2.2 thermostable beta-glucosidase B (NCBI ptt file) compare
BT4673 +1.2 8.7 two-component system sensor histidine kinase (NCBI ptt file) compare
BT1933 +1.2 3.2 transposase (NCBI ptt file) compare
BT0739 +1.2 2.3 hypothetical protein (NCBI ptt file) compare
BT1202 +1.2 1.2 UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT1207 +1.2 4.2 glycerate dehydrogenase (NADH-dependent) (NCBI ptt file) compare
BT4421 +1.2 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT2122 +1.1 2.4 lysyl-tRNA synthetase (NCBI ptt file) compare
BT2858 +1.1 4.8 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT4671 +1.1 8.8 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0528 +1.1 2.7 phosphoribosylanthranilate isomerase (EC 5.3.1.24) (from data) compare
BT0631 +1.1 1.7 conserved hypothetical protein (NCBI ptt file) compare
BT3387 +1.1 1.8 putative polysaccharide deacetylase (NCBI ptt file) compare
BT4544 +1.1 2.3 transposase (NCBI ptt file) compare
BT2852 +1.1 3.9 putative beta-xylosidase (NCBI ptt file) compare
BT1426 +1.1 4.2 conserved hypothetical protein (NCBI ptt file) compare
BT1806 +1.1 5.6 acyl-CoA dehydrogenase (NCBI ptt file) compare
BT4675 +1.1 3.7 heparin lyase I precursor (NCBI ptt file) compare
BT1203 +1.0 2.0 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT3080 +1.0 5.0 cysteine synthase A (NCBI ptt file) compare
BT2836 +1.0 6.8 2-oxoglutarate synthase subunit korA (NCBI ptt file) compare
BT3918 +1.0 3.3 pyridoxal phosphate biosynthetic protein pdxJ (NCBI ptt file) compare
BT0239 +1.0 5.2 hypothetical protein (NCBI ptt file) compare
BT0015 +1.0 2.0 rteB, two-component system response regulator (NCBI ptt file) compare
BT4670 +1.0 5.2 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT0107 +1.0 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT3255 +1.0 5.0 putative N6-adenine-specific DNA methylase (NCBI ptt file) compare
BT1455 +1.0 2.9 protein rtcB (NCBI ptt file) compare
BT1740 +1.0 2.8 hypothetical protein (NCBI ptt file) compare
BT1518 +1.0 3.0 hypothetical protein (NCBI ptt file) compare
BT0231 +1.0 1.7 excisionase (NCBI ptt file) compare
BT4668 +1.0 2.8 arabinogalactan endo-1,4-beta-galactosidase (NCBI ptt file) compare
BT0736 +1.0 2.2 putative transport protein (NCBI ptt file) compare
BT1784 +1.0 1.9 hypothetical protein (NCBI ptt file) compare
BT0793 +1.0 3.1 xylose isomerase (NCBI ptt file) compare
BT4008 +0.9 3.0 conserved hypothetical protein (NCBI ptt file) compare
BT0972 +0.9 1.4 putative oxidoreductase (NCBI ptt file) compare
BT2046 +0.9 0.7 putative cardiolipin synthetase (NCBI ptt file) compare
BT2435 +0.9 2.8 MarR family transcriptional regulator (NCBI ptt file) compare
BT0540 +0.9 3.3 putative exopolyphosphatase (NCBI ptt file) compare
BT1252 +0.9 2.5 hypothetical protein (NCBI ptt file) compare
BT3075 +0.9 6.1 NAD-dependent epimerase/dehydratase family protein (NCBI ptt file) compare
BT3355 +0.9 0.5 putative auxin-regulated protein (NCBI ptt file) compare
BT1262 +0.9 1.5 putative transcriptional regulator (NCBI ptt file) compare
BT2555 +0.9 3.1 hypothetical protein (NCBI ptt file) compare
BT2093 +0.9 2.5 hypothetical protein (NCBI ptt file) compare
BT4777 +0.9 2.6 hypothetical protein (NCBI ptt file) compare
BT2411 +0.9 3.9 hypothetical protein (NCBI ptt file) compare
BT3690 +0.9 3.1 putative membrane protein (NCBI ptt file) compare
BT1108 +0.9 2.8 conserved hypothetical protein, putative integral membrane protein (NCBI ptt file) compare
BT3999 +0.8 4.3 membrane-bound lytic murein transglycosylase D presursor (NCBI ptt file) compare
BT1201 +0.8 1.8 conserved hypothetical protein (NCBI ptt file) compare
BT2388 +0.8 2.8 hypothetical protein (NCBI ptt file) compare
BT1058 +0.8 4.5 two-component system sensor histidine kinase (NCBI ptt file) compare
BT1080 +0.8 1.0 hypothetical protein (NCBI ptt file) compare
BT3747 +0.8 2.5 hypothetical protein (NCBI ptt file) compare
BT1149 +0.8 2.4 Type II restriction enzyme HpaII (NCBI ptt file) compare
BT2791 +0.8 4.2 uracil phosphoribosyltransferase (NCBI ptt file) compare
BT0533 +0.8 2.0 tryptophan synthase beta chain (NCBI ptt file) compare
BT4406 +0.8 2.5 hypothetical protein (NCBI ptt file) compare
BT3970 +0.8 3.3 hypothetical protein (NCBI ptt file) compare
BT1948 +0.8 1.1 hypothetical protein (NCBI ptt file) compare
BT2315 +0.8 2.0 hypothetical protein (NCBI ptt file) compare
BT4498 +0.8 2.2 hypothetical protein (NCBI ptt file) compare
BT2038 +0.8 3.6 cation efflux system protein (NCBI ptt file) compare
BT3037 +0.8 2.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT1021 +0.8 2.7 arabinosidase (NCBI ptt file) compare
BT1817 +0.8 2.3 RNA polymerase ECF-type sigma factor (NCBI ptt file) compare
BT0481 +0.8 1.8 polysaccharide export outer membrane protein (NCBI ptt file) compare
BT0079 +0.8 2.3 putative anti-restriction protein (NCBI ptt file) compare
BT2034 +0.8 1.7 two-component system response regulator (NCBI ptt file) compare
BT1896 +0.8 2.4 putative cell surface antigen (NCBI ptt file) compare
BT1805 +0.8 1.5 electron transfer flavoprotein alpha-subunit (NCBI ptt file) compare
BT3370 +0.8 2.3 putative glycosyltransferase yibD (NCBI ptt file) compare
BT3074 +0.7 3.3 conserved hypothetical protein (NCBI ptt file) compare
BT3840 +0.7 2.2 putative RNA-binding protein rbpA (NCBI ptt file) compare
BT1424 +0.7 2.4 hypothetical protein (NCBI ptt file) compare
BT4447 +0.7 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT0313 +0.7 1.0 flavodoxin (NCBI ptt file) compare
BT1541 +0.7 2.6 conserved hypothetical protein (NCBI ptt file) compare
BT4698 +0.7 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT3782 +0.7 2.9 putative hydrolase (NCBI ptt file) compare
BT2314 +0.7 1.5 hypothetical protein (NCBI ptt file) compare
BT1974 +0.7 4.2 metallopeptidase family M24, putative Xaa-Pro dipeptidase (NCBI ptt file) compare
BT1392 +0.7 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT4747 +0.7 1.8 hypothetical protein (NCBI ptt file) compare
BT4735 +0.7 1.1 hypothetical protein (NCBI ptt file) compare
BT0704 +0.7 0.5 phosphoribosylglycinamide formyltransferase 2 (NCBI ptt file) compare
BT0150 +0.7 3.4 putative ferric aerobactin receptor (NCBI ptt file) compare
BT2823 +0.7 4.1 hypothetical protein (NCBI ptt file) compare
BT4699 +0.7 2.2 putative hydrolase, haloacid dehalogenase-like hydrolase (NCBI ptt file) compare
BT0165 +0.7 1.8 peptidyl-prolyl cis-trans isomerase (NCBI ptt file) compare
BT3919 +0.7 1.6 putative biopolymer transport protein (NCBI ptt file) compare
BT0660 +0.7 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT0530 +0.7 2.0 anthranilate phosphoribosyltransferase (EC 2.4.2.18) (from data) compare
BT1981 +0.7 1.6 hypothetical protein (NCBI ptt file) compare
BT0148 +0.7 2.3 putative hemolysin (NCBI ptt file) compare
BT1494 +0.7 1.4 conserved hypothetical protein (NCBI ptt file) compare
BT3047 +0.7 4.7 hypothetical protein (NCBI ptt file) compare
BT4414 +0.7 1.6 hypothetical protein (NCBI ptt file) compare
BT0849 +0.7 2.6 hypothetical protein (NCBI ptt file) compare
BT2078 +0.7 3.0 dihydroxy-acid dehydratase (NCBI ptt file) compare
BT1542 +0.7 4.1 putative pyridine nucleotide-disulfide oxidoreductase (NCBI ptt file) compare
BT0178 +0.7 2.1 hypothetical protein (NCBI ptt file) compare
BT0211 +0.7 3.5 hypothetical protein (NCBI ptt file) compare
BT0546 +0.7 2.0 conserved hypothetical protein (NCBI ptt file) compare
BT4038 +0.7 3.3 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT1286 +0.7 3.6 putative two-component system response regulator (NCBI ptt file) compare
BT2946 +0.7 1.3 putative glycosyltransferase (NCBI ptt file) compare
BT2651 +0.7 2.2 conserved hypothetical protein (NCBI ptt file) compare
BT0552 +0.7 2.3 glutamate synthase, small subunit (NCBI ptt file) compare
BT4452 +0.7 1.5 conserved hypothetical protein (NCBI ptt file) compare
BT3968 +0.7 2.8 cation efflux system protein (NCBI ptt file) compare
BT1903 +0.7 1.8 hypothetical protein (NCBI ptt file) compare
BT2855 +0.7 3.8 beta-mannosidase precursor (NCBI ptt file) compare
BT3925 +0.7 1.9 nucleoside diphosphate kinase (NCBI ptt file) compare
BT3794 +0.7 2.9 hypothetical protein (NCBI ptt file) compare
BT0673 +0.7 1.0 NADP(H) oxidoreductase (NCBI ptt file) compare
BT0861 +0.7 3.0 putative ABC transporter permease (NCBI ptt file) compare
BT0795 +0.7 2.1 conserved hypothetical protein (NCBI ptt file) compare
BT3284 +0.7 1.1 conserved hypothetical protein (NCBI ptt file) compare
BT3809 +0.6 3.6 ABC transporter ATP-binding protein (NCBI ptt file) compare
BT4719 +0.6 2.5 hypothetical protein (NCBI ptt file) compare
BT3046 +0.6 5.3 putative outer membrane protein, probably involved in nutrient binding (NCBI ptt file) compare
BT4576 +0.6 2.5 hypothetical protein (NCBI ptt file) compare
BT2541 +0.6 3.3 putative calcium-transporting ATPase (NCBI ptt file) compare
BT0383 +0.6 2.4 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) compare
BT1196 +0.6 3.3 pyruvate carboxylase subunit B) (NCBI ptt file) compare
BT2290 +0.6 1.5 conserved protein found in conjugate transposon (NCBI ptt file) compare
BT4361 +0.6 2.6 hypothetical protein (NCBI ptt file) compare
BT1183 +0.6 4.0 two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) compare
BT0019 +0.6 2.0 hypothetical protein (NCBI ptt file) compare
p5482_14 +0.6 2.5 hypothetical protein (NCBI) compare
BT1456 +0.6 1.2 thioredoxin (TRX) (NCBI ptt file) compare
BT2418 +0.6 2.4 hypothetical protein (NCBI ptt file) compare
BT1633 +0.6 2.5 mannose-1-phosphate guanyltransferase (NCBI ptt file) compare
BT4370 +0.6 2.0 putative hemolysin (NCBI ptt file) compare


Specific Phenotypes

For 5 genes in this experiment