Experiment set19IT038 for Bacteroides thetaiotaomicron VPI-5482
Post-colonization (Day 14) - Cage2;Mouse2
Group: mouse_post_colonizationMedia:
Culturing: Btheta_ML6a
By: Deanna Pepin on 2/1/21
Specific Phenotypes
For 5 genes in this experiment
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| L-fucose utilization | 1 |
| Lipoic acid metabolism | 1 |
| Propionate-CoA to Succinate Module | 1 |
| Serine-glyoxylate cycle | 1 |
| TCA Cycle | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Citrate cycle (TCA cycle)
- Starch and sucrose metabolism
- Glyoxylate and dicarboxylate metabolism
- Reductive carboxylate cycle (CO2 fixation)
- Lipoic acid metabolism
- Biosynthesis of phenylpropanoids
- Biosynthesis of terpenoids and steroids
- Biosynthesis of alkaloids derived from shikimate pathway
- Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
- Biosynthesis of alkaloids derived from histidine and purine
- Biosynthesis of alkaloids derived from terpenoid and polyketide
- Biosynthesis of plant hormones
MetaCyc Pathways
Pathways that contain genes with specific phenotypes: