Experiment set19IT019 for Burkholderia phytofirmans PsJN

Compare to:

Parafilmed volatile agar plate with no fungus

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS33030 +4.6 7.2 hypothetical protein compare
BPHYT_RS36220 +4.0 4.9 hypothetical protein compare
BPHYT_RS09620 +3.9 2.6 aminodeoxychorismate lyase compare
BPHYT_RS19985 +3.6 5.4 CoA-transferase compare
BPHYT_RS31060 +2.5 1.9 capsular polysaccharide biosynthesis protein compare
BPHYT_RS03900 +2.4 3.0 phospholipid-binding protein compare
BPHYT_RS32400 +2.3 1.4 TetR family transcriptional regulator compare
BPHYT_RS22860 +2.3 3.0 chemotaxis protein CheY compare
BPHYT_RS12265 +2.3 1.8 alanine acetyltransferase compare
BPHYT_RS25240 +2.1 1.2 choline-sulfatase compare
BPHYT_RS25095 +2.0 3.6 AraC family transcriptional regulator compare
BPHYT_RS16335 +2.0 2.5 membrane protein compare
BPHYT_RS36240 +2.0 4.4 hypothetical protein compare
BPHYT_RS36060 +1.8 1.2 hypothetical protein compare
BPHYT_RS36175 +1.8 1.1 hypothetical protein compare
BPHYT_RS22715 +1.7 1.0 L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) (from data) compare
BPHYT_RS22295 +1.7 2.3 LysR family transcriptional regulator compare
BPHYT_RS07635 +1.6 2.1 alkanesulfonate monooxygenase compare
BPHYT_RS10670 +1.6 2.8 catechol 1,2-dioxygenase compare
BPHYT_RS35205 +1.6 1.1 hypothetical protein compare
BPHYT_RS13885 +1.6 2.3 myo-inositol 2-dehydrogenase compare
BPHYT_RS10560 +1.6 1.4 hypothetical protein compare
BPHYT_RS00325 +1.6 1.9 hypothetical protein compare
BPHYT_RS11335 +1.6 2.3 hypothetical protein compare
BPHYT_RS26285 +1.6 1.7 glycogen debranching protein compare
BPHYT_RS03980 +1.5 1.0 mannose-1-phosphate guanyltransferase compare
BPHYT_RS34275 +1.5 2.2 peptide chain release factor 3 compare
BPHYT_RS23525 +1.5 2.0 hypothetical protein compare
BPHYT_RS15145 +1.5 2.5 3-oxoacyl-ACP synthase compare
BPHYT_RS22165 +1.5 5.4 hypothetical protein compare
BPHYT_RS05990 +1.5 2.6 hypothetical protein compare
BPHYT_RS09345 +1.5 0.8 TetR family transcriptional regulator compare
BPHYT_RS16570 +1.5 3.1 glutathione S-transferase compare
BPHYT_RS09315 +1.5 1.3 chemotaxis protein CheY compare
BPHYT_RS15035 +1.5 1.8 hypothetical protein compare
BPHYT_RS02575 +1.5 7.1 phosphoenolpyruvate-protein phosphotransferase compare
BPHYT_RS07435 +1.5 1.0 amino acid transporter compare
BPHYT_RS22230 +1.4 2.6 LuxR family transcriptional regulator compare
BPHYT_RS36400 +1.4 1.0 hypothetical protein compare
BPHYT_RS07665 +1.4 2.7 hypothetical protein compare
BPHYT_RS05585 +1.4 2.9 hypothetical protein compare
BPHYT_RS21460 +1.4 2.4 UDP-N-acetylglucosamine 2-epimerase compare
BPHYT_RS28670 +1.4 3.4 MFS transporter compare
BPHYT_RS09435 +1.3 1.5 MarR family transcriptional regulator compare
BPHYT_RS12230 +1.3 2.8 hypothetical protein compare
BPHYT_RS24185 +1.3 1.3 C4-dicarboxylate ABC transporter permease compare
BPHYT_RS08380 +1.3 3.2 multidrug MFS transporter compare
BPHYT_RS21625 +1.3 1.3 LysR family transcriptional regulator compare
BPHYT_RS26685 +1.3 0.8 precorrin-8X methylmutase compare
BPHYT_RS07900 +1.3 1.3 hypothetical protein compare
BPHYT_RS00960 +1.3 1.6 recombinase RecA compare
BPHYT_RS33110 +1.3 1.4 chloroperoxidase compare
BPHYT_RS05435 +1.3 1.8 ABC transporter substrate-binding protein compare
BPHYT_RS30810 +1.3 2.2 transcriptional regulator compare
BPHYT_RS30395 +1.3 3.0 small mechanosensitive ion channel protein MscS compare
BPHYT_RS09565 +1.3 1.4 acetyl-CoA acetyltransferase compare
BPHYT_RS29620 +1.3 1.0 hypothetical protein compare
BPHYT_RS03385 +1.2 4.2 DeoR family transcriptional regulator compare
BPHYT_RS11155 +1.2 1.4 hypothetical protein compare
BPHYT_RS00170 +1.2 1.4 lysine transporter LysE compare
BPHYT_RS23350 +1.2 2.3 NAD-dependent epimerase/dehydratase compare
BPHYT_RS15480 +1.2 1.5 hypothetical protein compare
BPHYT_RS03015 +1.2 0.8 aldolase compare
BPHYT_RS15695 +1.2 2.4 luciferase compare
BPHYT_RS22470 +1.2 1.4 hydrolase compare
BPHYT_RS20185 +1.2 1.0 sugar transferase compare
BPHYT_RS22420 +1.2 1.3 membrane protein compare
BPHYT_RS20475 +1.2 2.1 hypothetical protein compare
BPHYT_RS21470 +1.2 2.4 6-hydroxynicotinate reductase compare
BPHYT_RS34035 +1.2 2.5 type II and III secretion system outermembrane protein, secretin compare
BPHYT_RS35495 +1.2 2.1 nucleotide pyrophosphohydrolase compare
BPHYT_RS29830 +1.2 1.9 hypothetical protein compare
BPHYT_RS30410 +1.2 2.9 chloroperoxidase compare
BPHYT_RS09880 +1.2 2.3 MFS transporter compare
BPHYT_RS30380 +1.2 2.7 glyoxalase compare
BPHYT_RS26125 +1.2 1.9 ABC transporter substrate-binding protein compare
BPHYT_RS07265 +1.2 2.9 3-hydroxyanthranilate 3,4-dioxygenase compare
BPHYT_RS21725 +1.1 1.8 taurine ABC transporter substrate-binding protein compare
BPHYT_RS19090 +1.1 1.5 flagellar hook protein FliD compare
BPHYT_RS29485 +1.1 2.5 phosphonate ABC transporter ATP-binding protein compare
BPHYT_RS02570 +1.1 5.0 phosphocarrier protein HPr compare
BPHYT_RS25445 +1.1 2.3 alkyl hydroperoxide reductase compare
BPHYT_RS22260 +1.1 1.8 hypothetical protein compare
BPHYT_RS03685 +1.1 3.0 Tol system periplasmic component YbgF compare
BPHYT_RS33400 +1.1 1.7 magnesium transporter CorA compare
BPHYT_RS28985 +1.1 2.0 hypothetical protein compare
BPHYT_RS26835 +1.1 1.7 alkane 1-monooxygenase compare
BPHYT_RS17030 +1.1 1.0 lipid hydroperoxide peroxidase compare
BPHYT_RS08305 +1.1 1.7 membrane protein compare
BPHYT_RS10845 +1.1 2.2 UbiD family decarboxylase compare
BPHYT_RS19890 +1.1 1.1 hypothetical protein compare
BPHYT_RS25855 +1.1 1.7 hypothetical protein compare
BPHYT_RS28235 +1.1 2.9 L-rhamnose-1-dehydrogenase ( EC 1.1.1.173) (from data) compare
BPHYT_RS02295 +1.1 1.3 hypothetical protein compare
BPHYT_RS17175 +1.1 2.2 7,8-dihydro-8-oxoguanine-triphosphatase compare
BPHYT_RS14140 +1.1 3.1 phosphate transporter permease subunit PstC compare
BPHYT_RS11960 +1.0 1.0 MarR family transcriptional regulator compare
BPHYT_RS17490 +1.0 1.0 haloacid dehalogenase compare
BPHYT_RS21025 +1.0 0.8 cation-binding protein compare
BPHYT_RS06975 +1.0 1.5 glutamate racemase compare
BPHYT_RS29585 +1.0 2.4 hypothetical protein compare
BPHYT_RS14005 +1.0 1.9 ABC transporter compare
BPHYT_RS05565 +1.0 1.7 membrane protein compare
BPHYT_RS28905 +1.0 1.6 alpha-dehydro-beta-deoxy-D-glucarate aldolase compare
BPHYT_RS01105 +1.0 1.0 hypothetical protein compare
BPHYT_RS14970 +1.0 1.4 hypothetical protein compare
BPHYT_RS14245 +1.0 1.4 membrane protein compare
BPHYT_RS28730 +1.0 2.2 galactarate dehydratase compare
BPHYT_RS32225 +1.0 1.7 hypothetical protein compare
BPHYT_RS03720 +1.0 2.0 malonic semialdehyde reductase compare
BPHYT_RS23515 +1.0 2.2 porin compare
BPHYT_RS10930 +1.0 3.1 GCN5 family N-acetyltransferase compare
BPHYT_RS08340 +1.0 0.4 chemotaxis protein CheY compare
BPHYT_RS28365 +1.0 1.4 Germin subfamily 1 member 15 compare
BPHYT_RS01120 +0.9 2.0 plasmid partitioning protein ParB compare
BPHYT_RS22870 +0.9 0.9 copper transporter compare
BPHYT_RS02245 +0.9 1.1 MerR family transcriptional regulator compare
BPHYT_RS14500 +0.9 1.4 molybdenum cofactor biosynthesis protein MoaA compare
BPHYT_RS25270 +0.9 1.0 multidrug MFS transporter compare
BPHYT_RS36450 +0.9 2.1 hypothetical protein compare
BPHYT_RS33965 +0.9 1.6 methylcitrate synthase compare
BPHYT_RS10470 +0.9 0.8 hypothetical protein compare
BPHYT_RS15490 +0.9 2.4 coproporphyrinogen III oxidase compare
BPHYT_RS09740 +0.9 1.3 glycosyl transferase compare
BPHYT_RS10750 +0.9 1.0 LysR family transcriptional regulator compare
BPHYT_RS10475 +0.9 1.4 mammalian cell entry protein compare
BPHYT_RS06255 +0.9 1.1 spore coat protein U compare
BPHYT_RS07425 +0.9 1.3 hypothetical protein compare
BPHYT_RS03920 +0.9 1.6 lysine transporter LysE compare
BPHYT_RS30450 +0.9 0.7 ABC transporter permease compare
BPHYT_RS29115 +0.9 1.2 histidine kinase compare
BPHYT_RS34975 +0.9 1.7 L-aspartate dehydrogenase compare
BPHYT_RS22380 +0.9 1.8 Carnitine 3-dehydrogenase (EC 1.1.1.108) (from data) compare
BPHYT_RS31020 +0.9 1.3 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BPHYT_RS03865 +0.9 2.4 FAD-binding molybdopterin dehydrogenase compare
BPHYT_RS04165 +0.9 1.6 hypothetical protein compare
BPHYT_RS36005 +0.9 1.2 hypothetical protein compare
BPHYT_RS13755 +0.9 1.7 metallophosphoesterase compare
BPHYT_RS23730 +0.9 1.2 multidrug DMT transporter permease compare
BPHYT_RS10430 +0.9 2.2 glycosyl transferase family 1 compare
BPHYT_RS24650 +0.9 3.4 polar amino acid ABC transporter permease compare
BPHYT_RS27880 +0.9 1.2 diguanylate phosphodiesterase compare
BPHYT_RS17640 +0.9 1.2 2-alkenal reductase compare
BPHYT_RS31750 +0.9 1.6 ABC transporter compare
BPHYT_RS09610 +0.9 1.0 hypothetical protein compare
BPHYT_RS04450 +0.8 1.6 UDP-glucose 4-epimerase compare
BPHYT_RS10355 +0.8 1.6 nitrate reductase compare
BPHYT_RS07585 +0.8 1.9 N-formylglutamate deformylase (EC 3.5.1.68) (from data) compare
BPHYT_RS15070 +0.8 1.4 amidase compare
BPHYT_RS00975 +0.8 2.1 arsenic transporter compare
BPHYT_RS33010 +0.8 1.7 hypothetical protein compare
BPHYT_RS31960 +0.8 1.6 hypothetical protein compare
BPHYT_RS20345 +0.8 1.7 LysR family transcriptional regulator compare
BPHYT_RS25970 +0.8 0.7 urea amidolyase compare
BPHYT_RS05850 +0.8 1.2 hypothetical protein compare
BPHYT_RS27155 +0.8 1.2 peroxiredoxin compare
BPHYT_RS21905 +0.8 0.7 IclR family transcriptional regulator compare
BPHYT_RS19920 +0.8 0.8 peptidyl-prolyl cis-trans isomerase compare
BPHYT_RS34505 +0.8 1.2 hypothetical protein compare
BPHYT_RS10760 +0.8 1.6 major facilitator transporter compare
BPHYT_RS29865 +0.8 1.1 sugar transferase compare
BPHYT_RS27970 +0.8 1.2 sugar ABC transporter permease compare
BPHYT_RS08595 +0.8 1.8 multidrug transporter compare
BPHYT_RS25780 +0.8 0.7 DeoR faimly transcriptional regulator compare
BPHYT_RS09600 +0.8 1.6 hypothetical protein compare
BPHYT_RS32465 +0.8 2.4 membrane protein compare
BPHYT_RS09735 +0.8 0.9 glycosyl transferase compare
BPHYT_RS14685 +0.8 0.7 peptidase C39 compare
BPHYT_RS34605 +0.8 2.4 transcriptional regulator compare
BPHYT_RS28860 +0.8 0.7 haloacid dehalogenase compare
BPHYT_RS33125 +0.8 1.2 hypothetical protein compare
BPHYT_RS22965 +0.8 2.0 ligand-gated channel protein compare
BPHYT_RS00695 +0.8 3.1 branched-chain amino acid ABC transporter permease compare
BPHYT_RS04670 +0.8 1.7 sulfurtransferase compare
BPHYT_RS12220 +0.8 1.9 glutathione ABC transporter ATP-binding protein compare
BPHYT_RS10740 +0.8 1.0 LuxR family transcriptional regulator compare
BPHYT_RS10065 +0.8 1.1 cytochrome C oxidase subunit I compare
BPHYT_RS15985 +0.8 1.6 thioredoxin compare
BPHYT_RS29130 +0.8 1.8 RND transporter MFP subunit compare
BPHYT_RS35505 +0.8 1.1 short-chain dehydrogenase compare
BPHYT_RS29670 +0.8 1.6 flagellar motor protein MotA compare
BPHYT_RS27370 +0.8 1.2 CoA transferase compare
BPHYT_RS11370 +0.8 1.4 RND transporter MFP subunit compare
BPHYT_RS10715 +0.8 1.4 acyl-CoA dehydrogenase compare
BPHYT_RS35675 +0.8 0.8 short-chain dehydrogenase compare
BPHYT_RS20785 +0.8 1.1 CoA-transferase compare
BPHYT_RS18850 +0.8 2.4 Flagellar brake protein YcgR 1 compare
BPHYT_RS08720 +0.8 2.5 membrane protein compare
BPHYT_RS10170 +0.8 3.2 oxidoreductase compare
BPHYT_RS10285 +0.8 1.6 hypothetical protein compare
BPHYT_RS02420 +0.8 2.8 cytochrome C550 compare
BPHYT_RS28830 +0.8 0.6 LysR family transcriptional regulator compare
BPHYT_RS18590 +0.8 0.6 hypothetical protein compare
BPHYT_RS17695 +0.8 4.1 membrane protein compare
BPHYT_RS15465 +0.8 1.8 tRNA-Gly compare
BPHYT_RS11745 +0.8 0.7 (2Fe-2S)-binding protein compare
BPHYT_RS25810 +0.8 1.0 acetaldehyde dehydrogenase (EC 1.2.1.3) (from data) compare
BPHYT_RS20130 +0.8 0.9 diguanylate phosphodiesterase compare
BPHYT_RS01050 +0.8 2.3 short-chain dehydrogenase compare
BPHYT_RS23080 +0.8 2.4 gamma-glutamyltransferase compare


Specific Phenotypes

For 1 genes in this experiment