Experiment set19IT017 for Burkholderia phytofirmans PsJN

Compare to:

Parafilmed volatile agar plate with Trichoderma atroviridae IMI

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS06485 +5.3 21.8 globin compare
BPHYT_RS03685 +3.0 8.6 Tol system periplasmic component YbgF compare
BPHYT_RS20725 +2.2 4.2 histidine kinase compare
BPHYT_RS20185 +2.2 2.9 sugar transferase compare
BPHYT_RS11215 +2.0 10.0 ribose ABC transporter ATPase compare
BPHYT_RS30795 +2.0 1.6 short-chain dehydrogenase compare
BPHYT_RS34185 +1.7 6.1 cold-shock protein compare
BPHYT_RS06975 +1.7 3.3 glutamate racemase compare
BPHYT_RS30825 +1.6 2.7 extradiol dioxygenase compare
BPHYT_RS25780 +1.6 1.8 DeoR faimly transcriptional regulator compare
BPHYT_RS26390 +1.5 1.7 antibiotic resistance protein compare
BPHYT_RS14140 +1.5 3.4 phosphate transporter permease subunit PstC compare
BPHYT_RS23155 +1.5 2.0 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) (from data) compare
BPHYT_RS05485 +1.5 2.0 nitrogen regulatory protein P-II 1 compare
BPHYT_RS34545 +1.5 3.7 transcriptional regulator compare
BPHYT_RS30450 +1.5 1.5 ABC transporter permease compare
BPHYT_RS24585 +1.5 3.2 NUDIX hydrolase compare
BPHYT_RS16290 +1.4 1.6 hypothetical protein compare
BPHYT_RS26955 +1.4 1.8 succinylglutamate desuccinylase compare
BPHYT_RS28000 +1.4 3.1 permease compare
BPHYT_RS25980 +1.4 1.4 urea carboxylase compare
BPHYT_RS08295 +1.4 1.6 TetR family transcriptional regulator compare
BPHYT_RS20840 +1.4 3.2 beta-lactamase compare
BPHYT_RS03755 +1.4 2.0 pilus assembly protein PilE compare
BPHYT_RS25270 +1.4 2.2 multidrug MFS transporter compare
BPHYT_RS24315 +1.4 2.7 phosphoribosyltransferase compare
BPHYT_RS17640 +1.4 2.8 2-alkenal reductase compare
BPHYT_RS33010 +1.4 3.9 hypothetical protein compare
BPHYT_RS17545 +1.4 5.3 cold-shock protein compare
BPHYT_RS02865 +1.4 2.3 hypothetical protein compare
BPHYT_RS22455 +1.4 1.3 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS23525 +1.3 1.9 hypothetical protein compare
BPHYT_RS34975 +1.3 2.1 L-aspartate dehydrogenase compare
BPHYT_RS29530 +1.3 1.2 succinylglutamate desuccinylase/aspartoacylase compare
BPHYT_RS25210 +1.3 1.4 drug:proton antiporter compare
BPHYT_RS25545 +1.3 1.1 hypothetical protein compare
BPHYT_RS28595 +1.3 1.8 glyoxalase compare
BPHYT_RS22250 +1.3 1.8 D-amino acid dehydrogenase compare
BPHYT_RS36220 +1.3 1.3 hypothetical protein compare
BPHYT_RS17890 +1.3 2.6 shikimate kinase compare
BPHYT_RS25470 +1.2 1.6 alkylhydroperoxidase compare
BPHYT_RS00145 +1.2 1.2 hypothetical protein compare
BPHYT_RS05320 +1.2 1.3 beta-lactamase compare
BPHYT_RS03715 +1.2 2.7 4-hydroxybenzoyl-CoA thioesterase compare
BPHYT_RS03015 +1.2 0.9 aldolase compare
BPHYT_RS25970 +1.2 1.2 urea amidolyase compare
BPHYT_RS07165 +1.2 2.3 peptide ABC transporter permease compare
BPHYT_RS10850 +1.2 1.3 LysR family transcriptional regulator compare
BPHYT_RS04595 +1.2 1.9 cytoplasmic protein compare
BPHYT_RS12480 +1.2 1.9 hypothetical protein compare
BPHYT_RS17030 +1.2 1.4 lipid hydroperoxide peroxidase compare
BPHYT_RS25005 +1.2 0.8 FMN reductase compare
BPHYT_RS31020 +1.2 2.0 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BPHYT_RS24590 +1.2 1.7 DeoR faimly transcriptional regulator compare
BPHYT_RS26300 +1.1 1.1 ATP-dependent DNA ligase compare
BPHYT_RS34300 +1.1 1.6 major facilitator transporter compare
BPHYT_RS09565 +1.1 1.1 acetyl-CoA acetyltransferase compare
BPHYT_RS16335 +1.1 1.4 membrane protein compare
BPHYT_RS14370 +1.1 1.8 ribonuclease III compare
BPHYT_RS21330 +1.1 1.3 hypothetical protein compare
BPHYT_RS14740 +1.1 4.8 threonine-phosphate decarboxylase compare
BPHYT_RS27395 +1.1 1.9 N-acetyltransferase GCN5 compare
BPHYT_RS29585 +1.1 1.9 hypothetical protein compare
BPHYT_RS25135 +1.1 1.7 hypothetical protein compare
BPHYT_RS00705 +1.1 1.1 branched-chain amino acid ABC transporter substrate-binding protein compare
BPHYT_RS04665 +1.1 4.1 hypothetical protein compare
BPHYT_RS35220 +1.1 1.4 extradiol dioxygenase compare
BPHYT_RS26355 +1.1 1.3 hypothetical protein compare
BPHYT_RS13885 +1.1 1.5 myo-inositol 2-dehydrogenase compare
BPHYT_RS31590 +1.1 1.9 hypothetical protein compare
BPHYT_RS21975 +1.0 1.8 2-dehydropantoate 2-reductase compare
BPHYT_RS09525 +1.0 2.5 toxin HipA compare
BPHYT_RS16055 +1.0 3.0 sugar ABC transporter permease compare
BPHYT_RS21585 +1.0 1.1 short-chain dehydrogenase compare
BPHYT_RS28920 +1.0 1.5 cellulose synthase compare
BPHYT_RS11745 +1.0 1.2 (2Fe-2S)-binding protein compare
BPHYT_RS20935 +1.0 2.4 dehydrogenase compare
BPHYT_RS15015 +1.0 1.3 ArsR family transcriptional regulator compare
BPHYT_RS06710 +1.0 1.1 hypothetical protein compare
BPHYT_RS07665 +1.0 1.3 hypothetical protein compare
BPHYT_RS29620 +1.0 0.8 hypothetical protein compare
BPHYT_RS30395 +1.0 1.3 small mechanosensitive ion channel protein MscS compare
BPHYT_RS35230 +1.0 1.8 type 11 methyltransferase compare
BPHYT_RS22835 +1.0 1.0 flagellar motor protein MotA compare
BPHYT_RS36585 +1.0 1.8 hypothetical protein compare
BPHYT_RS21050 +1.0 1.6 aldehyde-activating protein compare
BPHYT_RS14505 +1.0 1.8 membrane protein compare
BPHYT_RS05290 +1.0 0.9 hypothetical protein compare
BPHYT_RS36590 +1.0 2.1 hypothetical protein compare
BPHYT_RS26860 +1.0 1.6 major facilitator transporter compare
BPHYT_RS11230 +1.0 4.8 hypothetical protein compare
BPHYT_RS20475 +1.0 2.0 hypothetical protein compare
BPHYT_RS02010 +1.0 1.6 copper homeostasis protein CutC compare
BPHYT_RS36175 +1.0 1.4 hypothetical protein compare
BPHYT_RS11005 +1.0 1.9 chromate transporter compare
BPHYT_RS28370 +0.9 1.4 peroxidase compare
BPHYT_RS10135 +0.9 1.0 hypothetical protein compare
BPHYT_RS12900 +0.9 1.6 transposase compare
BPHYT_RS13315 +0.9 1.6 dihydropyrimidine dehydrogenase subunit A compare
BPHYT_RS32120 +0.9 1.8 hypothetical protein compare
BPHYT_RS21725 +0.9 1.4 taurine ABC transporter substrate-binding protein compare
BPHYT_RS09650 +0.9 1.1 hypothetical protein compare
BPHYT_RS07870 +0.9 1.7 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase compare
BPHYT_RS23515 +0.9 2.1 porin compare
BPHYT_RS23500 +0.9 1.6 hypothetical protein compare
BPHYT_RS11075 +0.9 1.5 membrane protein compare
BPHYT_RS11020 +0.9 1.9 transporter compare
BPHYT_RS35730 +0.9 3.1 hypothetical protein compare
BPHYT_RS30890 +0.9 1.1 hypothetical protein compare
BPHYT_RS20790 +0.9 1.5 TetR family transcriptional regulator compare
BPHYT_RS36555 +0.9 5.6 hypothetical protein compare
BPHYT_RS33070 +0.9 1.8 haloacid dehalogenase compare
BPHYT_RS07090 +0.9 1.8 hypothetical protein compare
BPHYT_RS27800 +0.9 2.1 esterase compare
BPHYT_RS33805 +0.9 0.9 hypothetical protein compare
BPHYT_RS11335 +0.9 2.5 hypothetical protein compare
BPHYT_RS03400 +0.9 0.6 ATP-dependent DNA helicase RecG compare
BPHYT_RS03515 +0.9 1.4 D-lactate dehydrogenase compare
BPHYT_RS27690 +0.9 2.3 carbamate kinase compare
BPHYT_RS35100 +0.9 1.2 ABC transporter substrate-binding protein compare
BPHYT_RS05850 +0.9 1.8 hypothetical protein compare
BPHYT_RS07190 +0.9 2.3 acetyltransferase compare
BPHYT_RS03195 +0.9 5.0 membrane protein compare
BPHYT_RS10185 +0.9 1.9 MarR family transcriptional regulator compare
BPHYT_RS30865 +0.9 1.4 sugar ABC transporter ATP-binding protein compare
BPHYT_RS31415 +0.9 1.7 amino acid ABC transporter permease compare
BPHYT_RS20955 +0.8 2.2 3-oxoacyl-ACP reductase compare
BPHYT_RS07315 +0.8 2.0 lipase compare
BPHYT_RS04820 +0.8 1.9 LysR family transcriptional regulator compare
BPHYT_RS27100 +0.8 3.8 RNase II stability modulator compare
BPHYT_RS07635 +0.8 2.5 alkanesulfonate monooxygenase compare
BPHYT_RS29540 +0.8 1.0 aldolase compare
BPHYT_RS29185 +0.8 1.3 sugar ABC transporter permease compare
BPHYT_RS03925 +0.8 1.5 LysR family transcriptional regulator compare
BPHYT_RS11210 +0.8 1.4 ABC transporter permease compare
BPHYT_RS23280 +0.8 1.3 phosphate ABC transporter substrate-binding protein compare
BPHYT_RS30905 +0.8 1.4 histidine kinase compare
BPHYT_RS34995 +0.8 1.4 MFS transporter compare
BPHYT_RS23850 +0.8 2.7 ser/threonine protein phosphatase compare
BPHYT_RS33160 +0.8 1.6 hypothetical protein compare
BPHYT_RS10230 +0.8 1.9 hypothetical protein compare
BPHYT_RS18760 +0.8 1.8 flagellar biosynthesis protein FliT compare
BPHYT_RS29960 +0.8 3.9 LuxR family transcriptional regulator compare
BPHYT_RS07320 +0.8 1.2 dihydrodipicolinate synthetase compare
BPHYT_RS32435 +0.8 2.6 formate dehydrogenase-N subunit beta compare
BPHYT_RS30285 +0.8 1.5 succinate-semialdehyde dehydrogenase compare
BPHYT_RS15775 +0.8 2.4 peptide ABC transporter permease compare
BPHYT_RS35560 +0.8 1.1 endoribonuclease L-PSP compare
BPHYT_RS26540 +0.8 1.1 hypothetical protein compare
BPHYT_RS25395 +0.8 1.0 3-oxoacyl-ACP reductase compare
BPHYT_RS23060 +0.8 2.7 3-isopropylmalate dehydratase large subunit compare
BPHYT_RS09415 +0.8 1.7 carboxylesterase compare
BPHYT_RS35160 +0.8 0.9 PKHD-type hydroxylase compare
BPHYT_RS26570 +0.8 0.7 5'-nucleotidase compare
BPHYT_RS08765 +0.8 0.7 ABC transporter ATP-binding protein compare
BPHYT_RS11220 +0.8 1.3 LacI family transcriptional regulator compare
BPHYT_RS33215 +0.8 1.9 glycosyltransferase compare
BPHYT_RS22465 +0.8 2.4 zinc carboxypeptidase-like protein compare
BPHYT_RS22190 +0.8 1.7 nucleoid-structuring protein H-NS compare
BPHYT_RS19890 +0.8 0.8 hypothetical protein compare
BPHYT_RS23875 +0.8 0.8 sugar ABC transporter ATP-binding protein compare
BPHYT_RS20520 +0.8 1.1 transcriptional regulator compare
BPHYT_RS27085 +0.8 1.3 alkylhydroperoxidase compare
BPHYT_RS11235 +0.8 0.9 hypothetical protein compare
BPHYT_RS13760 +0.8 1.8 hypothetical protein compare
BPHYT_RS36075 +0.7 2.0 hypothetical protein compare
BPHYT_RS22710 +0.7 2.0 XRE family transcriptional regulator compare
BPHYT_RS32525 +0.7 0.5 hypothetical protein compare
BPHYT_RS01965 +0.7 1.1 tRNA-Ala compare
BPHYT_RS05390 +0.7 2.0 isochorismatase compare
BPHYT_RS35590 +0.7 1.1 tryptophanyl-tRNA synthetase compare
BPHYT_RS08000 +0.7 1.3 antibiotic biosynthesis monooxygenase compare
BPHYT_RS18420 +0.7 1.5 hypothetical protein compare
BPHYT_RS21905 +0.7 0.6 IclR family transcriptional regulator compare
BPHYT_RS34075 +0.7 1.7 chemotaxis protein CheY compare
BPHYT_RS08210 +0.7 2.7 membrane protein compare
BPHYT_RS08475 +0.7 2.9 hypothetical protein compare
BPHYT_RS29015 +0.7 0.6 RND transporter compare
BPHYT_RS21350 +0.7 1.5 ADP-glucose pyrophosphorylase compare
BPHYT_RS13835 +0.7 0.8 S-adenosylhomocysteine nucleosidase compare
BPHYT_RS22860 +0.7 0.8 chemotaxis protein CheY compare
BPHYT_RS30585 +0.7 1.3 dTDP-glucose 4,6-dehydratase compare
BPHYT_RS36400 +0.7 0.6 hypothetical protein compare
BPHYT_RS23975 +0.7 1.4 peroxidase compare
BPHYT_RS15465 +0.7 2.2 tRNA-Gly compare
BPHYT_RS12325 +0.7 2.2 GNAT family acetyltransferase compare
BPHYT_RS08170 +0.7 1.3 pilus assembly protein CpaB compare
BPHYT_RS04015 +0.7 0.9 glycosyl transferase compare
BPHYT_RS02480 +0.7 0.9 alkaline phosphatase compare
BPHYT_RS36240 +0.7 1.3 hypothetical protein compare
BPHYT_RS19435 +0.7 1.2 16S rRNA methyltransferase compare
BPHYT_RS06295 +0.7 1.4 diguanylate phosphodiesterase compare
BPHYT_RS36560 +0.7 2.6 hypothetical protein compare
BPHYT_RS14470 +0.7 2.0 Rieske (2Fe-2S) protein compare
BPHYT_RS26815 +0.7 1.2 1-aminocyclopropane-1-carboxylate deaminase compare
BPHYT_RS06285 +0.7 1.4 diguanylate cyclase compare
BPHYT_RS13705 +0.7 1.6 chorismate synthase compare
BPHYT_RS31090 +0.7 1.6 hypothetical protein compare
BPHYT_RS19625 +0.7 1.2 general secretion pathway protein I compare
BPHYT_RS33485 +0.7 1.6 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment