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Experiment set19IT014 for
Burkholderia phytofirmans PsJN
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Parafilmed volatile agar plate with Trichoderma atroviridae IMI
200 most important genes:
gene
name
fitness
t score
description
BPHYT
_RS16835
-6.3
-5.6
glyceraldehyde-3-phosphate dehydrogenase
compare
BPHYT
_RS16270
-6.2
-3.2
phosphoglycerate kinase
compare
BPHYT
_RS17890
-5.4
-2.0
shikimate kinase
compare
BPHYT
_RS08060
-5.1
-9.2
ribosome maturation factor RimP
compare
BPHYT
_RS16710
-4.9
-1.1
LysR family transcriptional regulator
compare
BPHYT
_RS19985
-4.6
-1.0
CoA-transferase
compare
BPHYT
_RS17240
-4.3
-0.9
cell division protein FtsW
compare
BPHYT
_RS17630
-4.3
-5.9
ubiquinol-cytochrome C reductase
compare
BPHYT
_RS14855
-4.2
-1.6
ADP-L-glycero-D-manno-heptose-6-epimerase
compare
BPHYT
_RS01620
-4.0
-6.1
sensor histidine kinase
compare
BPHYT
_RS17625
-4.0
-15.8
cytochrome B
compare
BPHYT
_RS06610
-3.9
-1.2
triosephosphate isomerase
compare
BPHYT
_RS17095
-3.9
-2.8
proline--tRNA ligase
compare
BPHYT
_RS06405
-3.9
-6.5
phosphoribosylamine--glycine ligase
compare
BPHYT
_RS02590
-3.9
-6.4
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
compare
BPHYT
_RS14485
-3.8
-4.0
ribonuclease E
compare
BPHYT
_RS17620
-3.7
-9.5
cytochrome C
compare
BPHYT
_RS08850
-3.7
-1.6
transcriptional regulator
compare
BPHYT
_RS16255
-3.7
-2.5
phosphoribosylaminoimidazole-succinocarboxamide synthase
compare
BPHYT
_RS16675
-3.6
-1.8
dihydroorotase
compare
BPHYT
_RS09515
-3.6
-3.5
phosphoribosylformylglycinamidine synthase
compare
BPHYT
_RS01455
-3.5
-1.1
peptide deformylase
compare
BPHYT
_RS12465
-3.5
-1.4
inositol monophosphatase
compare
BPHYT
_RS03725
-3.4
-1.3
serine hydroxymethyltransferase
compare
BPHYT
_RS33920
-3.4
-7.6
type II citrate synthase
compare
BPHYT
_RS12055
-3.4
-16.8
phosphoenolpyruvate synthase
compare
BPHYT
_RS13605
-3.3
-0.7
tRNA-Pro
compare
BPHYT
_RS15710
-3.3
-1.6
ATP-dependent Clp protease ATP-binding protein
compare
BPHYT
_RS14670
-3.3
-1.2
hypothetical protein
compare
BPHYT
_RS12845
-3.3
-8.2
ATPase
compare
BPHYT
_RS15075
-3.2
-1.8
dihydrokaempferol 4-reductase
compare
BPHYT
_RS18320
-3.1
-7.3
orotate phosphoribosyltransferase
compare
BPHYT
_RS34780
-3.1
-4.2
phytoene synthase
compare
BPHYT
_RS16345
-3.1
-3.7
succinyl-CoA ligase [ADP-forming] subunit beta
compare
BPHYT
_RS08960
-3.1
-1.6
threonine synthase
compare
BPHYT
_RS14190
-3.0
-6.3
carbamoyl phosphate synthase large subunit
compare
BPHYT
_RS01625
-3.0
-1.7
chemotaxis protein CheY
compare
BPHYT
_RS15415
-2.9
-9.7
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
compare
BPHYT
_RS09500
-2.9
-5.2
glucose-6-phosphate isomerase
compare
BPHYT
_RS18790
-2.9
-7.6
ATP synthase
compare
BPHYT
_RS14735
-2.9
-1.1
hypothetical protein
compare
BPHYT
_RS18895
-2.9
-5.0
flagellar basal body rod protein FlgB
compare
BPHYT
_RS33840
-2.8
-8.5
amidophosphoribosyltransferase
compare
BPHYT
_RS18825
-2.8
-4.9
flagellar biosynthesis protein FliP
compare
BPHYT
_RS00815
-2.8
-1.1
hypothetical protein
compare
BPHYT
_RS20235
-2.7
-5.4
iron ABC transporter
compare
BPHYT
_RS18785
-2.7
-1.6
flagellar assembly protein FliH
compare
BPHYT
_RS23270
-2.7
-0.8
enoyl-CoA hydratase
compare
BPHYT
_RS04290
-2.7
-1.5
glycosyl transferase family 2
compare
BPHYT
_RS16840
-2.7
-1.7
transketolase
compare
BPHYT
_RS18875
-2.7
-6.7
flagellar basal body rod protein FlgF
compare
BPHYT
_RS33515
-2.7
-6.9
porin
compare
BPHYT
_RS25780
-2.7
-0.8
DeoR faimly transcriptional regulator
compare
BPHYT
_RS17520
-2.7
-4.9
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
compare
BPHYT
_RS02130
-2.6
-2.5
hydroxymethylglutaryl-CoA lyase
compare
BPHYT
_RS18945
-2.6
-5.9
flagellar biosynthesis protein FlhB
compare
BPHYT
_RS03640
-2.6
-3.5
phosphoribosylformylglycinamidine cyclo-ligase
compare
BPHYT
_RS15620
-2.5
-3.0
peptidyl-prolyl cis-trans isomerase
compare
BPHYT
_RS18865
-2.5
-3.3
flagellar L-ring protein FlgH
compare
BPHYT
_RS33150
-2.5
-1.0
beta-lactamase
compare
BPHYT
_RS18880
-2.5
-9.1
flagellar hook protein FlgE
compare
BPHYT
_RS14755
-2.5
-2.7
tRNA (guanine-N(1)-)-methyltransferase
compare
BPHYT
_RS18800
-2.5
-6.3
flagellar hook-length control protein
compare
BPHYT
_RS13470
-2.5
-0.9
arylsulfate sulfotransferase
compare
BPHYT
_RS18900
-2.5
-10.0
flagella basal body P-ring formation protein FlgA
compare
BPHYT
_RS18810
-2.4
-7.6
flagellar motor switch protein FliM
compare
BPHYT
_RS04285
-2.4
-1.5
rhamnosyltransferase
compare
BPHYT
_RS07705
-2.4
-2.4
arginine succinyltransferase
compare
BPHYT
_RS06990
-2.4
-1.2
membrane protein
compare
BPHYT
_RS02755
-2.4
-0.9
cyd operon protein YbgT
compare
BPHYT
_RS18855
-2.4
-4.8
flagellar rod assembly protein FlgJ
compare
BPHYT
_RS04335
-2.4
-1.4
membrane protein
compare
BPHYT
_RS18935
-2.4
-9.1
flagellar biosynthesis regulator FlhF
compare
BPHYT
_RS10945
-2.3
-1.6
2-deoxy-D-gluconate 3-dehydrogenase
compare
BPHYT
_RS14060
-2.3
-1.5
peptidase M23
compare
BPHYT
_RS04010
-2.3
-1.2
glycosyl transferase
compare
BPHYT
_RS18840
-2.3
-7.0
flagellar hook-associated protein FlgL
compare
BPHYT
_RS22295
-2.3
-1.0
LysR family transcriptional regulator
compare
BPHYT
_RS06985
-2.3
-6.1
fumarate hydratase
compare
BPHYT
_RS24095
-2.3
-3.1
membrane protein
compare
BPHYT
_RS18780
-2.3
-4.9
flagellar motor switch protein FliG
compare
BPHYT
_RS18845
-2.3
-9.8
flagellar hook-associated protein FlgK
compare
BPHYT
_RS18775
-2.3
-10.6
flagellar M-ring protein FliF
compare
BPHYT
_RS14865
-2.2
-1.2
UDP-glucose 6-dehydrogenase
compare
BPHYT
_RS09160
-2.2
-3.5
polyhydroxyalkanoate synthesis repressor PhaR
compare
BPHYT
_RS02525
-2.2
-5.6
membrane protein
compare
BPHYT
_RS29345
-2.2
-1.6
lipoyl synthase
compare
BPHYT
_RS31050
-2.2
-1.0
epimerase
compare
BPHYT
_RS18940
-2.2
-7.2
flagellar biosynthesis protein FlhA
compare
BPHYT
_RS17955
-2.2
-3.8
cytochrome C
compare
BPHYT
_RS14195
-2.2
-1.9
carbamoyl phosphate synthase small subunit
compare
BPHYT
_RS07540
-2.1
-0.9
hypothetical protein
compare
BPHYT
_RS36600
-2.1
-1.9
lytic transglycosylase
compare
BPHYT
_RS11235
-2.1
-0.9
hypothetical protein
compare
BPHYT
_RS02975
-2.1
-1.7
membrane protein
compare
BPHYT
_RS18340
-2.1
-1.6
n-acetyl-gamma-glutamyl-phosphate reductase
compare
BPHYT
_RS06175
-2.1
-3.2
LPS biosynthesis
compare
BPHYT
_RS23910
-2.1
-1.7
phosphoribosyl-dephospho-CoA transferase
compare
BPHYT
_RS17035
-2.1
-2.0
sugar kinase
compare
BPHYT
_RS18860
-2.0
-3.9
flagellar P-ring protein FlgI
compare
BPHYT
_RS18910
-2.0
-1.3
FlgN
compare
BPHYT
_RS29540
-2.0
-0.9
aldolase
compare
BPHYT
_RS18795
-2.0
-6.2
flagellar export protein FliJ
compare
BPHYT
_RS09650
-2.0
-1.7
hypothetical protein
compare
BPHYT
_RS18870
-2.0
-3.4
flagellar basal body rod protein FlgG
compare
BPHYT
_RS16905
-2.0
-2.1
orotidine 5'-phosphate decarboxylase
compare
BPHYT
_RS33645
-2.0
-5.3
homoserine kinase
compare
BPHYT
_RS09480
-2.0
-0.8
peptidyl-prolyl cis-trans isomerase
compare
BPHYT
_RS12725
-2.0
-9.2
regulator
compare
BPHYT
_RS18890
-2.0
-2.1
flagellar basal body rod protein FlgC
compare
BPHYT
_RS16090
-2.0
-1.3
hypothetical protein
compare
BPHYT
_RS33890
-2.0
-8.5
fimbrial protein FimV
compare
BPHYT
_RS18925
-2.0
-6.1
RNA polymerase sigma70
compare
BPHYT
_RS33580
-2.0
-3.9
geranyltranstransferase
compare
BPHYT
_RS27410
-2.0
-1.8
amidohydrolase
compare
BPHYT
_RS16340
-2.0
-3.2
succinyl-CoA synthetase subunit alpha
compare
BPHYT
_RS01730
-2.0
-2.1
serine/threonine protein kinase
compare
BPHYT
_RS03110
-1.9
-1.4
MarR family transcriptional regulator
compare
BPHYT
_RS19260
-1.9
-0.8
hypothetical protein
compare
BPHYT
_RS16245
-1.9
-3.1
phosphoribosylaminoimidazole carboxylase
compare
BPHYT
_RS20245
-1.9
-4.0
iron ABC transporter substrate-binding protein
compare
BPHYT
_RS12990
-1.9
-1.5
iron transporter
compare
BPHYT
_RS36275
-1.9
-1.3
hypothetical protein
compare
BPHYT
_RS02610
-1.8
-3.9
glycerol-3-phosphate dehydrogenase [NAD(P)+]
compare
BPHYT
_RS33535
-1.8
-13.0
RNA polymerase sigma factor RpoD
compare
BPHYT
_RS18885
-1.8
-4.7
flagellar basal body rod modification protein FlgD
compare
BPHYT
_RS20880
-1.8
-0.8
polyketide cyclase
compare
BPHYT
_RS08125
-1.8
-5.6
ATPase
compare
BPHYT
_RS18965
-1.8
-1.2
chemotaxis protein CheY
compare
BPHYT
_RS27160
-1.8
-1.0
hypothetical protein
compare
BPHYT
_RS09825
-1.8
-1.4
Fe-S protein
compare
BPHYT
_RS12615
-1.8
-1.1
dihydrodipicolinate synthase
compare
BPHYT
_RS26490
-1.8
-0.8
hypothetical protein
compare
BPHYT
_RS17445
-1.8
-3.0
GTP-binding protein YchF
compare
BPHYT
_RS24580
-1.8
-1.2
hypothetical protein
compare
BPHYT
_RS06685
-1.8
-1.0
NADH:ubiquinone oxidoreductase subunit M
compare
BPHYT
_RS07480
-1.7
-1.1
FAD-dependent oxidoreductase
compare
BPHYT
_RS19015
-1.7
-9.5
flagellar motor protein MotA
compare
BPHYT
_RS08995
-1.7
-0.9
hypothetical protein
compare
BPHYT
_RS06075
-1.7
-5.2
hypothetical protein
compare
BPHYT
_RS13645
-1.7
-10.2
threonine--tRNA ligase
compare
BPHYT
_RS14185
-1.7
-1.4
transcription elongation factor GreA
compare
BPHYT
_RS04965
-1.7
-5.1
ATP-binding protein
compare
BPHYT
_RS14400
-1.7
-2.3
anti-sigma factor
compare
BPHYT
_RS29705
-1.7
-2.4
(2Fe-2S)-binding protein
compare
BPHYT
_RS10710
-1.7
-1.5
sensor histidine kinase
compare
BPHYT
_RS22835
-1.7
-0.9
flagellar motor protein MotA
compare
BPHYT
_RS26880
-1.7
-1.4
ketosteroid isomerase
compare
BPHYT
_RS06790
-1.7
-4.8
hypothetical protein
compare
BPHYT
_RS02180
-1.7
-1.6
hypothetical protein
compare
BPHYT
_RS17380
-1.7
-6.6
ribulose-phosphate 3-epimerase
compare
BPHYT
_RS13160
-1.7
-1.1
membrane protein
compare
BPHYT
_RS16135
-1.7
-6.0
ABC transporter ATP-binding protein
compare
BPHYT
_RS36480
-1.7
-1.9
hypothetical protein
compare
BPHYT
_RS16215
-1.6
-3.2
sensor histidine kinase
compare
BPHYT
_RS08565
-1.6
-0.5
dihydroorotate dehydrogenase
compare
BPHYT
_RS17530
-1.6
-2.0
3-octaprenyl-4-hydroxybenzoate carboxy-lyase
compare
BPHYT
_RS18805
-1.6
-4.0
flagellar basal body protein FliL
compare
BPHYT
_RS18970
-1.6
-7.5
chemotaxis protein
compare
BPHYT
_RS10095
-1.6
-1.6
integrase
compare
BPHYT
_RS33465
-1.6
-2.9
D-alanyl-D-alanine carboxypeptidase
compare
BPHYT
_RS18765
-1.6
-2.9
flagellar biosynthesis protein FliS
compare
BPHYT
_RS27330
-1.6
-0.9
hypothetical protein
compare
BPHYT
_RS18830
-1.6
-2.7
flagellar biosynthesis protein FliQ
compare
BPHYT
_RS27890
-1.6
-0.8
hypothetical protein
compare
BPHYT
_RS20750
-1.6
-1.3
LacI family transcriptional regulator
compare
BPHYT
_RS12550
-1.6
-0.7
GTP-binding protein HflX
compare
BPHYT
_RS14550
-1.6
-0.7
tRNA-Asn
compare
BPHYT
_RS29850
-1.6
-1.2
protein tyrosine kinase
compare
BPHYT
_RS12145
-1.5
-7.6
methionine aminopeptidase
compare
BPHYT
_RS33155
-1.5
-1.4
hypothetical protein
compare
BPHYT
_RS27560
-1.5
-1.1
histidine kinase
compare
BPHYT
_RS25500
-1.5
-1.1
hypothetical protein
compare
BPHYT
_RS23455
-1.5
-0.6
phosphorylase
compare
BPHYT
_RS10650
-1.5
-1.0
membrane protein
compare
BPHYT
_RS33885
-1.5
-8.1
tRNA pseudouridine synthase A
compare
BPHYT
_RS25055
-1.5
-3.1
MFS transporter
compare
BPHYT
_RS01795
-1.5
-4.5
histidine kinase
compare
BPHYT
_RS18705
-1.5
-1.3
5,10-methylenetetrahydrofolate reductase
compare
BPHYT
_RS22500
-1.5
-2.3
transcriptional regulator
compare
BPHYT
_RS34920
-1.5
-1.3
IclR family transcriptional regulator
compare
BPHYT
_RS19115
-1.5
-1.8
acyl carrier protein
compare
BPHYT
_RS22915
-1.5
-2.0
pilus assembly protein CpaE
compare
BPHYT
_RS18260
-1.5
-5.2
phenylacetic acid degradation protein
compare
BPHYT
_RS11155
-1.4
-0.8
hypothetical protein
compare
BPHYT
_RS12150
-1.4
-7.5
PII uridylyl-transferase
compare
BPHYT
_RS18835
-1.4
-1.1
flagellar biosynthesis protein FliR
compare
BPHYT
_RS06550
-1.4
-1.2
acetolactate synthase
compare
BPHYT
_RS08190
-1.4
-1.2
type II secretion system protein
compare
BPHYT
_RS11270
-1.4
-4.2
hypothetical protein
compare
BPHYT
_RS35735
-1.4
-1.0
nitroreductase
compare
BPHYT
_RS05455
-1.4
-1.7
AraC family transcriptional regulator
compare
BPHYT
_RS01790
-1.4
-6.6
LuxR family transcriptional regulator
compare
BPHYT
_RS02765
-1.4
-1.0
cytochrome BD oxidase subunit I
compare
BPHYT
_RS18250
-1.4
-5.4
phenylacetate-CoA oxygenase subunit PaaA
compare
BPHYT
_RS09000
-1.4
-0.8
competence protein ComE
compare
BPHYT
_RS29020
-1.4
-1.6
hypothetical protein
compare
BPHYT
_RS01435
-1.3
-11.6
LysR family transcriptional regulator
compare
BPHYT
_RS08245
-1.3
-3.4
anti-sigma factor
compare
BPHYT
_RS03410
-1.3
-1.5
queuine tRNA-ribosyltransferase
compare
Specific Phenotypes
For 8 genes in this experiment