Experiment set19IT014 for Burkholderia phytofirmans PsJN

Compare to:

Parafilmed volatile agar plate with Trichoderma atroviridae IMI

200 most detrimental genes:

  gene name fitness t score description  
BPHYT_RS17405 +5.6 9.2 indole-3-glycerol phosphate synthase compare
BPHYT_RS34295 +3.9 5.7 fimbrial protein compare
BPHYT_RS03685 +3.6 11.6 Tol system periplasmic component YbgF compare
BPHYT_RS29855 +3.2 4.8 protein-tyrosine-phosphatase compare
BPHYT_RS02865 +2.9 5.4 hypothetical protein compare
BPHYT_RS28470 +2.9 1.8 hypothetical protein compare
BPHYT_RS29960 +2.9 4.1 LuxR family transcriptional regulator compare
BPHYT_RS25400 +2.8 9.2 butyryl-CoA dehydrogenase compare
BPHYT_RS14900 +2.8 7.8 prephenate dehydrogenase compare
BPHYT_RS05845 +2.7 5.5 hypothetical protein compare
BPHYT_RS29585 +2.6 1.4 hypothetical protein compare
BPHYT_RS20430 +2.5 2.7 3-dehydroquinate dehydratase compare
BPHYT_RS10360 +2.5 2.4 MFS transporter compare
BPHYT_RS10165 +2.5 1.7 transcriptional regulator compare
BPHYT_RS26080 +2.5 3.3 ABC transporter ATPase compare
BPHYT_RS03740 +2.5 1.5 hypothetical protein compare
BPHYT_RS22020 +2.4 2.6 IclR family transcriptional regulator compare
BPHYT_RS28805 +2.4 5.7 glyoxalase compare
BPHYT_RS20845 +2.4 1.8 peroxidase compare
BPHYT_RS22265 +2.4 1.5 hypothetical protein compare
BPHYT_RS06930 +2.4 1.8 hypothetical protein compare
BPHYT_RS07390 +2.3 1.7 transmembrane protein compare
BPHYT_RS26910 +2.2 6.4 hypothetical protein compare
BPHYT_RS09565 +2.2 1.9 acetyl-CoA acetyltransferase compare
BPHYT_RS22260 +2.2 3.9 hypothetical protein compare
BPHYT_RS06975 +2.1 2.9 glutamate racemase compare
BPHYT_RS32845 +2.1 1.5 ABC transporter substrate-binding protein compare
BPHYT_RS28985 +2.1 2.2 hypothetical protein compare
BPHYT_RS10430 +2.0 1.5 glycosyl transferase family 1 compare
BPHYT_RS01985 +2.0 1.4 hypothetical protein compare
BPHYT_RS27030 +2.0 3.5 transcriptional regulator compare
BPHYT_RS05690 +1.9 3.9 hypothetical protein compare
BPHYT_RS04400 +1.9 1.3 Crp/Fnr family transcriptional regulator compare
BPHYT_RS24110 +1.8 2.2 hypothetical protein compare
BPHYT_RS34185 +1.8 5.1 cold-shock protein compare
BPHYT_RS22455 +1.8 1.5 phosphonate ABC transporter substrate-binding protein compare
BPHYT_RS11750 +1.8 1.9 spermidine/putrescine ABC transporter ATP-binding protein compare
BPHYT_RS04095 +1.7 1.8 SAM-dependent methyltransferase PhcB compare
BPHYT_RS34300 +1.7 2.5 major facilitator transporter compare
BPHYT_RS26355 +1.7 2.1 hypothetical protein compare
BPHYT_RS22055 +1.7 3.5 DNA-binding protein compare
BPHYT_RS20355 +1.6 1.7 ABC transporter substrate-binding protein compare
BPHYT_RS11795 +1.6 1.9 membrane protein compare
BPHYT_RS29520 +1.6 1.4 hypothetical protein compare
BPHYT_RS29015 +1.6 1.3 RND transporter compare
BPHYT_RS10040 +1.6 1.5 hypothetical protein compare
BPHYT_RS29920 +1.6 1.3 hypothetical protein compare
BPHYT_RS24590 +1.6 2.1 DeoR faimly transcriptional regulator compare
BPHYT_RS09185 +1.5 2.9 hypothetical protein compare
BPHYT_RS16250 +1.5 1.6 N5-carboxyaminoimidazole ribonucleotide mutase compare
BPHYT_RS19945 +1.5 2.3 hypothetical protein compare
BPHYT_RS07465 +1.5 3.3 FAD-dependent pyridine nucleotide-disulfide oxidoreductase compare
BPHYT_RS25525 +1.5 4.0 hypothetical protein compare
BPHYT_RS24055 +1.5 2.1 oxidoreductase compare
BPHYT_RS29710 +1.5 2.7 FAD-binding molybdopterin dehydrogenase compare
BPHYT_RS32115 +1.5 1.9 hypothetical protein compare
BPHYT_RS02860 +1.5 1.1 membrane protein compare
BPHYT_RS08425 +1.5 2.4 hypothetical protein compare
BPHYT_RS11310 +1.5 1.6 LysR family transcriptional regulator compare
BPHYT_RS09235 +1.5 1.4 hypothetical protein compare
BPHYT_RS34505 +1.5 2.1 hypothetical protein compare
BPHYT_RS11215 +1.5 4.4 ribose ABC transporter ATPase compare
BPHYT_RS13900 +1.5 2.3 ATPase compare
BPHYT_RS03715 +1.5 2.9 4-hydroxybenzoyl-CoA thioesterase compare
BPHYT_RS27785 +1.5 2.6 hypothetical protein compare
BPHYT_RS17545 +1.4 4.7 cold-shock protein compare
BPHYT_RS35430 +1.4 1.0 DSBA oxidoreductase compare
BPHYT_RS31910 +1.4 1.9 hypothetical protein compare
BPHYT_RS21045 +1.4 2.9 bis(5'-nucleosyl)-tetraphosphatase compare
BPHYT_RS30900 +1.4 1.2 transcriptional regulator compare
BPHYT_RS00980 +1.4 1.3 GCN5 family acetyltransferase compare
BPHYT_RS09155 +1.4 3.8 3-ketoacyl-ACP reductase compare
BPHYT_RS31430 +1.4 2.9 FAD-dependent oxidoreductase compare
BPHYT_RS21170 +1.4 0.9 LysR family transcriptional regulator compare
BPHYT_RS27720 +1.4 1.5 hypothetical protein compare
BPHYT_RS23690 +1.3 3.6 hypothetical protein compare
BPHYT_RS20630 +1.3 2.1 patatin compare
BPHYT_RS07535 +1.3 1.8 hypothetical protein compare
BPHYT_RS36355 +1.3 2.0 hypothetical protein compare
BPHYT_RS31120 +1.3 2.6 pseudouridine-5'-phosphate glycosidase compare
BPHYT_RS04015 +1.3 1.6 glycosyl transferase compare
BPHYT_RS24315 +1.3 2.1 phosphoribosyltransferase compare
BPHYT_RS19555 +1.3 3.2 glutamine amidotransferase compare
BPHYT_RS09980 +1.3 1.5 TetR family transcriptional regulator compare
BPHYT_RS33425 +1.3 1.8 transcriptional regulator compare
BPHYT_RS00225 +1.3 1.0 hypothetical protein compare
BPHYT_RS14125 +1.3 1.7 transcriptional regulator compare
BPHYT_RS21415 +1.3 1.2 3-oxoadipate CoA-transferase subunit A compare
BPHYT_RS14150 +1.3 2.8 transposase compare
BPHYT_RS07190 +1.3 3.3 acetyltransferase compare
BPHYT_RS02235 +1.3 2.7 beta carbonic anhydrase compare
BPHYT_RS24475 +1.3 1.3 AraC family transcriptional regulator compare
BPHYT_RS01975 +1.3 1.9 hypothetical protein compare
BPHYT_RS27710 +1.2 2.0 universal stress protein A compare
BPHYT_RS36555 +1.2 4.7 hypothetical protein compare
BPHYT_RS36460 +1.2 1.0 hypothetical protein compare
BPHYT_RS36470 +1.2 1.5 hypothetical protein compare
BPHYT_RS26955 +1.2 1.2 succinylglutamate desuccinylase compare
BPHYT_RS22435 +1.2 2.1 4-aminobutyrate aminotransferase compare
BPHYT_RS29810 +1.2 1.3 hexapeptide transferase compare
BPHYT_RS22015 +1.2 1.8 spermidine/putrescine ABC transporter ATPase compare
BPHYT_RS05390 +1.2 1.3 isochorismatase compare
BPHYT_RS23990 +1.2 1.5 N-hydroxyarylamine O-acetyltransferase compare
BPHYT_RS25870 +1.2 1.1 type III secretion system ATPase compare
BPHYT_RS10680 +1.2 0.9 LysR family transcriptional regulator compare
BPHYT_RS31200 +1.2 1.8 peptide ABC transporter substrate-binding protein compare
BPHYT_RS03965 +1.2 1.5 GDP-mannose mannosyl hydrolase compare
BPHYT_RS36230 +1.2 1.1 hypothetical protein compare
BPHYT_RS28455 +1.2 1.1 2,5-dioxovalerate dehydrogenase compare
BPHYT_RS30890 +1.2 1.2 hypothetical protein compare
BPHYT_RS31205 +1.2 1.4 peptide ABC transporter ATP-binding protein compare
BPHYT_RS11555 +1.2 2.2 allantoinase compare
BPHYT_RS34995 +1.2 1.7 MFS transporter compare
BPHYT_RS20545 +1.2 1.5 hypothetical protein compare
BPHYT_RS22940 +1.2 1.3 pilus assembly protein TadE compare
BPHYT_RS03015 +1.2 0.7 aldolase compare
BPHYT_RS31640 +1.2 1.3 GntR family transcriptional regulator compare
BPHYT_RS09875 +1.2 1.1 aldehyde dehydrogenase compare
BPHYT_RS24065 +1.1 1.1 glucose-methanol-choline oxidoreductase compare
BPHYT_RS33185 +1.1 4.3 methyltransferase type 11 compare
BPHYT_RS14180 +1.1 1.5 membrane protein compare
BPHYT_RS02070 +1.1 2.8 hypothetical protein compare
BPHYT_RS08475 +1.1 2.5 hypothetical protein compare
BPHYT_RS14140 +1.1 2.6 phosphate transporter permease subunit PstC compare
BPHYT_RS22145 +1.1 1.7 phosphoesterase compare
BPHYT_RS28485 +1.1 1.1 GntR family transcriptional regulator compare
BPHYT_RS23130 +1.1 3.7 hypothetical protein compare
BPHYT_RS10345 +1.1 1.2 flagellar motor protein MotB compare
BPHYT_RS31620 +1.1 1.9 mandelate racemase compare
BPHYT_RS01055 +1.1 1.4 LysR family transcriptional regulator compare
BPHYT_RS09970 +1.1 1.2 glutathione S-transferase compare
BPHYT_RS18330 +1.1 1.3 phosphatidylethanolamine-binding protein compare
BPHYT_RS30840 +1.1 1.3 small mechanosensitive ion channel protein MscS compare
BPHYT_RS32435 +1.1 3.1 formate dehydrogenase-N subunit beta compare
BPHYT_RS26870 +1.1 2.8 cytochrome C551 compare
BPHYT_RS17900 +1.1 2.0 hypothetical protein compare
BPHYT_RS34975 +1.1 1.4 L-aspartate dehydrogenase compare
BPHYT_RS25240 +1.1 1.6 choline-sulfatase compare
BPHYT_RS33160 +1.1 2.1 hypothetical protein compare
BPHYT_RS02150 +1.1 0.9 biotin synthase compare
BPHYT_RS20840 +1.1 1.2 beta-lactamase compare
BPHYT_RS00530 +1.1 1.7 hypothetical protein compare
BPHYT_RS03635 +1.0 2.3 ABC transporter permease compare
BPHYT_RS19890 +1.0 1.0 hypothetical protein compare
BPHYT_RS25005 +1.0 1.0 FMN reductase compare
BPHYT_RS24140 +1.0 1.4 2,5-dioxovalerate dehydrogenase compare
BPHYT_RS20085 +1.0 0.9 mannosyltransferase compare
BPHYT_RS19785 +1.0 0.9 chemotaxis protein CheY compare
BPHYT_RS20095 +1.0 0.7 transcriptional regulator compare
BPHYT_RS33740 +1.0 1.7 hypothetical protein compare
BPHYT_RS07410 +1.0 1.1 glucosamine--fructose-6-phosphate aminotransferase compare
BPHYT_RS00370 +1.0 1.8 ABC transporter ATP-binding protein compare
BPHYT_RS36310 +1.0 1.6 hypothetical protein compare
BPHYT_RS16475 +1.0 1.0 hypothetical protein compare
BPHYT_RS22290 +1.0 3.3 membrane protein compare
BPHYT_RS36585 +1.0 2.1 hypothetical protein compare
BPHYT_RS31345 +1.0 1.7 malonate transporter compare
BPHYT_RS00170 +1.0 1.5 lysine transporter LysE compare
BPHYT_RS00295 +1.0 0.9 hypothetical protein compare
BPHYT_RS30945 +1.0 1.5 LacI family transcriptional regulator compare
BPHYT_RS29420 +1.0 1.6 GntR family transcriptional regulator compare
BPHYT_RS15530 +1.0 1.2 glutathione ABC transporter permease compare
BPHYT_RS10070 +1.0 1.0 hypothetical protein compare
BPHYT_RS32505 +1.0 1.9 ABC transporter permease compare
BPHYT_RS01265 +1.0 1.2 lysine transporter LysE compare
BPHYT_RS21110 +1.0 1.7 FO synthase compare
BPHYT_RS21480 +1.0 1.5 hypothetical protein compare
BPHYT_RS36240 +1.0 1.3 hypothetical protein compare
BPHYT_RS11515 +1.0 2.8 LysR family transcriptional regulator compare
BPHYT_RS05810 +1.0 1.1 hypothetical protein compare
BPHYT_RS17155 +1.0 4.0 peptidase A24 compare
BPHYT_RS33170 +1.0 1.6 acetyltransferase compare
BPHYT_RS07690 +1.0 1.5 AraC family transcriptional regulator compare
BPHYT_RS20185 +1.0 0.8 sugar transferase compare
BPHYT_RS28535 +1.0 0.8 response regulator receiver compare
BPHYT_RS25235 +1.0 2.3 LysR family transcriptional regulator compare
BPHYT_RS32335 +1.0 1.8 AsnC family transcriptional regulator compare
BPHYT_RS11125 +1.0 1.1 alkylhydroperoxidase compare
BPHYT_RS27100 +1.0 3.6 RNase II stability modulator compare
BPHYT_RS03755 +1.0 2.0 pilus assembly protein PilE compare
BPHYT_RS24630 +1.0 1.2 (2Fe-2S)-binding protein compare
BPHYT_RS26695 +1.0 1.7 cobalamin biosynthesis protein CbiG compare
BPHYT_RS02100 +1.0 1.3 AsnC family transcriptional regulator compare
BPHYT_RS03375 +1.0 1.4 NAD(P) transhydrogenase compare
BPHYT_RS14500 +0.9 1.3 molybdenum cofactor biosynthesis protein MoaA compare
BPHYT_RS31890 +0.9 1.2 transposase compare
BPHYT_RS06005 +0.9 2.0 chorismate--pyruvate lyase compare
BPHYT_RS14895 +0.9 1.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
BPHYT_RS29300 +0.9 1.4 endoribonuclease L-PSP compare
BPHYT_RS01990 +0.9 3.0 methyl-accepting chemotaxis protein compare
BPHYT_RS30055 +0.9 1.0 hypothetical protein compare
BPHYT_RS33690 +0.9 0.7 molybdate ABC transporter permease compare
BPHYT_RS25820 +0.9 0.8 sugar ABC transporter compare
BPHYT_RS28760 +0.9 2.3 porin compare
BPHYT_RS26035 +0.9 0.9 ABC transporter ATP-binding protein compare
BPHYT_RS17810 +0.9 1.9 transcriptional regulator compare
BPHYT_RS30420 +0.9 1.4 transcriptional regulator compare
BPHYT_RS34250 +0.9 1.6 ABC transporter for L-rhamnose/L-fucose/xylitol, substrate-binding component (from data) compare
BPHYT_RS24775 +0.9 1.4 helicase compare
BPHYT_RS13080 +0.9 0.8 hypothetical protein compare


Specific Phenotypes

For 8 genes in this experiment