Experiment set18S83 for Pseudomonas syringae pv. syringae B728a

Compare to:

MBOA 1.2 mM

200 most important genes:

  gene name fitness t score description  
Psyr_5088 -4.4 -8.4 regulatory protein, LuxR:Response regulator receiver compare
Psyr_5091 -3.9 -20.7 Binding-protein-dependent transport systems inner membrane component compare
Psyr_5089 -3.7 -9.2 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_5090 -3.6 -10.1 ABC transporter compare
Psyr_2900 -2.5 -5.1 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase compare
Psyr_3675 -2.5 -3.3 adenosylcobinamide kinase compare
Psyr_3698 -2.4 -2.3 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_4143 -2.2 -4.0 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI compare
Psyr_2139 -2.1 -7.0 Kef-type potassium/proton antiporter, CPA2 family compare
Psyr_1749 -2.1 -7.3 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_3013 -2.1 -1.8 magnesium chelatase subunit ChlD compare
Psyr_1400 -2.0 -12.0 outer membrane porin compare
Psyr_3676 -1.9 -3.5 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_4136 -1.9 -2.5 BolA-like protein compare
Psyr_1419 -1.9 -2.8 preQ(0) biosynthesis protein QueC compare
Psyr_5040 -1.9 -11.6 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0857 -1.9 -3.0 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_5041 -1.8 -9.2 phosphate ABC transporter substrate-binding protein, PhoT family compare
Psyr_0493 -1.7 -3.1 CheW-like protein compare
Psyr_1762 -1.7 -8.3 conserved hypothetical protein compare
Psyr_1613 -1.7 -2.8 septum site-determining protein MinC compare
Psyr_4843 -1.7 -4.6 NUDIX hydrolase compare
Psyr_5034 -1.6 -7.5 CBS:Protein of unknown function DUF21:Transporter-associated region compare
Psyr_0575 -1.6 -1.1 protease FtsH subunit HflC compare
Psyr_5039 -1.6 -10.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0475 -1.6 -2.9 Protein of unknown function YGGT compare
Psyr_3120 -1.6 -2.7 D-glucarate dehydratase compare
Psyr_3674 -1.5 -2.0 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_0444 -1.4 -1.4 Malonate decarboxylase delta subunit compare
Psyr_4830 -1.4 -2.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4178 -1.3 -4.0 tRNA pseudouridine synthase B compare
Psyr_4566 -1.3 -4.5 Peptidase M23B compare
Psyr_3290 -1.3 -2.8 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_4887 -1.3 -6.4 Peptidase S41A, C-terminal protease compare
Psyr_0528 -1.3 -1.9 Carbamoyltransferase compare
Psyr_0293 -1.3 -6.5 Polyphosphate kinase compare
Psyr_4122 -1.2 -4.6 AFG1-like ATPase compare
Psyr_0976 -1.2 -2.2 Malate:quinone-oxidoreductase compare
Psyr_3791 -1.2 -2.0 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_2897 -1.2 -3.6 regulatory protein, LuxR:Response regulator receiver compare
Psyr_5038 -1.1 -6.7 phosphate ABC transporter ATP-binding protein, PhoT family compare
Psyr_1109 -1.1 -5.7 6-phosphogluconate dehydratase compare
Psyr_4774 -1.1 -2.1 Hypothetical protein compare
Psyr_4842 -1.1 -4.7 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_4116 -1.1 -1.5 Transport-associated protein compare
Psyr_3425 -1.1 -2.7 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_0364 -1.1 -3.5 sodium/proton antiporter, NhaA family compare
Psyr_2256 -1.1 -3.1 ABC transporter compare
Psyr_4141 -1.1 -2.4 ABC transporter compare
Psyr_4138 -1.0 -2.5 Toluene tolerance compare
Psyr_2190 -1.0 -2.6 NADH:flavin oxidoreductase/NADH oxidase compare
Psyr_1796 -1.0 -2.3 GCN5-related N-acetyltransferase compare
Psyr_3672 -1.0 -1.7 cobalamin-5'-phosphate synthase compare
Psyr_0017 -1.0 -2.5 16S rRNA m(5)C-967 methyltransferase compare
Psyr_3476 -1.0 -2.4 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_4750 -1.0 -1.8 cell division ATP-binding protein FtsE compare
Psyr_3906 -1.0 -1.3 regulatory protein, DeoR compare
Psyr_4839 -1.0 -6.3 hypothetical protein compare
Psyr_1410 -1.0 -2.3 Holliday junction DNA helicase RuvB compare
Psyr_4408 -1.0 -3.8 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_0579 -1.0 -4.7 RNAse R compare
Psyr_4115 -0.9 -1.6 phosphoheptose isomerase compare
Psyr_3808 -0.9 -1.8 hypothetical protein compare
Psyr_3680 -0.9 -2.1 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase compare
Psyr_1594 -0.9 -3.5 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_1596 -0.9 -2.4 Helix-turn-helix motif protein compare
Psyr_5067 -0.9 -1.8 conserved hypothetical protein compare
Psyr_0179 -0.9 -1.0 Protein of unknown function DUF1289 compare
Psyr_0576 -0.9 -2.2 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_2227 -0.9 -1.9 conserved hypothetical protein compare
Psyr_3282 -0.9 -2.8 transcriptional regulator, TetR family compare
Psyr_0497 -0.9 -2.0 LamB/YcsF compare
Psyr_0033 -0.9 -1.8 tryptophan synthase, alpha chain compare
Psyr_4788 -0.9 -1.9 lipoprotein, putative compare
Psyr_4158 -0.9 -4.1 conserved hypothetical protein compare
Psyr_2117 -0.9 -1.9 conserved hypothetical protein compare
Psyr_4336 -0.9 -2.6 ribosomal large subunit pseudouridine synthase E compare
Psyr_2137 -0.8 -2.0 molybdopterin molybdochelatase compare
Psyr_1202 -0.8 -2.2 negative regulator of hrp expression HrpV compare
Psyr_4424 -0.8 -3.5 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_0811 -0.8 -3.4 Integral membrane protein TerC compare
Psyr_1638 -0.8 -1.4 RNAse E compare
Psyr_0849 -0.8 -3.3 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_1910 -0.8 -1.7 VacJ-like lipoprotein compare
Psyr_0212 -0.8 -2.5 Conserved hypothetical protein 255 compare
Psyr_1883 -0.8 -3.3 Hypothetical protein compare
Psyr_2151 -0.8 -1.3 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_0395 -0.8 -2.2 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_4051 -0.8 -1.5 transcriptional regulator, ArsR family compare
Psyr_2446 -0.8 -3.1 MCP methyltransferase, CheR-type compare
Psyr_0947 -0.8 -2.6 TPR repeat protein:TPR repeat protein compare
Psyr_1268 -0.8 -1.4 extracellular solute-binding protein, family 3:SLT compare
Psyr_2201 -0.8 -3.0 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family compare
Psyr_4415 -0.8 -3.3 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase compare
Psyr_0519 -0.8 -4.5 Glutamate-ammonia-ligase adenylyltransferase compare
Psyr_4754 -0.8 -0.7 16S rRNA m(2)G-966 methyltransferase compare
Psyr_1140 -0.8 -1.6 Disulfide bond formation protein DsbB compare
Psyr_0885 -0.8 -1.1 conserved hypothetical protein compare
Psyr_1160 -0.7 -5.2 Uncharacterized protein conserved in bacteria-like protein compare
Psyr_0680 -0.7 -1.9 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_2262 -0.7 -1.8 Peptidase M20:Peptidase M20 compare
Psyr_3585 -0.7 -1.7 Sua5/YciO/YrdC/YwlC compare
Psyr_2757 -0.7 -2.4 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2253 -0.7 -1.8 Phosphonate metabolism compare
Psyr_2563 -0.7 -1.9 HAD-superfamily hydrolase, subfamily IIA compare
Psyr_3637 -0.7 -4.4 Glycosyl transferase, family 4 compare
Psyr_0769 -0.7 -2.8 conserved hypothetical membrane-anchored protein compare
Psyr_3311 -0.7 -2.4 Virulence factor MVIN-like protein compare
Psyr_1556 -0.7 -1.6 hypothetical protein compare
Psyr_2467 -0.7 -2.4 3-methylcrotonoyl-CoA carboxylase, alpha subunit compare
Psyr_3055 -0.7 -1.5 Aminoglycoside phosphotransferase compare
Psyr_0291 -0.7 -1.9 DedA compare
Psyr_3553 -0.7 -3.4 conserved hypothetical protein compare
Psyr_2461 -0.7 -1.9 Uncharacterized conserved protein UCP030820 compare
Psyr_0404 -0.7 -2.8 Fimbrial assembly compare
Psyr_3678 -0.7 -2.0 adenosylcobinamide-phosphate synthase compare
Psyr_5131 -0.7 -1.8 16S rRNA m(7)G-527 methyltransferase compare
Psyr_0983 -0.7 -2.6 Protein of unknown function DUF159 compare
Psyr_0295 -0.7 -2.8 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_4941 -0.7 -1.5 NUDIX hydrolase compare
Psyr_3183 -0.7 -3.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
Psyr_3755 -0.6 -1.2 conserved hypothetical protein compare
Psyr_0259 -0.6 -1.3 Osmolarity sensor protein envZ compare
Psyr_3555 -0.6 -1.2 aspartate kinase compare
Psyr_4991 -0.6 -0.4 hypothetical protein compare
Psyr_0569 -0.6 -2.9 N-acetylmuramoyl-L-alanine amidase compare
Psyr_0201 -0.6 -2.7 ATP-dependent DNA helicase RecG compare
Psyr_0214 -0.6 -0.9 conserved hypothetical protein compare
Psyr_5050 -0.6 -2.0 transcriptional regulator, LysR family compare
Psyr_2779 -0.6 -1.5 Phage minor tail compare
Psyr_4159 -0.6 -2.9 RNAse G compare
Psyr_0941 -0.6 -2.5 Conserved hypothetical protein 92 compare
Psyr_0248 -0.6 -2.3 conserved hypothetical protein compare
Psyr_2134 -0.6 -1.9 protein of unknown function DUF903 compare
Psyr_0920 -0.6 -5.1 Glycosyl transferase, group 1 compare
Psyr_0232 -0.6 -4.1 gamma-glutamylputrescine oxidase compare
Psyr_0533 -0.6 -2.0 conserved hypothetical protein compare
Psyr_3862 -0.6 -1.6 conserved hypothetical protein compare
Psyr_3711 -0.6 -3.2 Dienelactone hydrolase compare
Psyr_3377 -0.6 -1.3 transcriptional regulator, MarR family compare
Psyr_3681 -0.6 -1.0 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_1402 -0.6 -1.3 SlyX compare
Psyr_0394 -0.6 -2.2 Heat shock protein HslU compare
Psyr_5071 -0.6 -2.2 conserved hypothetical protein compare
Psyr_3142 -0.6 -1.2 general secretion pathway protein N, putative compare
Psyr_1547 -0.6 -2.1 glycine cleavage system transcriptional repressor compare
Psyr_2312 -0.6 -1.0 Protein of unknown function DUF24 compare
Psyr_1563 -0.6 -3.0 Ribonuclease D compare
Psyr_4696 -0.6 -2.8 transcriptional regulator, LacI family compare
Psyr_2879 -0.6 -1.8 VirK compare
Psyr_1050 -0.6 -1.3 conserved hypothetical protein compare
Psyr_2362 -0.6 -2.6 Silent information regulator protein Sir2 compare
Psyr_1277 -0.6 -1.2 formate-dependent phosphoribosylglycinamide formyltransferase compare
Psyr_1530 -0.6 -1.5 hypothetical protein compare
Psyr_4837 -0.6 -4.2 Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase compare
Psyr_1725 -0.6 -1.6 Protein of unknown function DUF204 compare
Psyr_2469 -0.6 -2.9 Propionyl-CoA carboxylase compare
Psyr_2415 -0.6 -2.0 hypothetical protein compare
Psyr_4789 -0.6 -1.4 lipoprotein, putative compare
Psyr_1941 -0.6 -1.2 ATP-binding region, ATPase-like:Histidine kinase compare
Psyr_3636 -0.6 -3.9 Polysaccharide biosynthesis protein CapD compare
Psyr_1911 -0.5 -1.9 conserved hypothetical protein compare
Psyr_3383 -0.5 -3.8 extracellular solute-binding protein, family 1 compare
Psyr_3932 -0.5 -0.9 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_2679 -0.5 -2.1 Binding-protein-dependent transport systems inner membrane component compare
Psyr_5132 -0.5 -0.4 Glucose-inhibited division protein A subfamily compare
Psyr_2767 -0.5 -1.1 Glycoside hydrolase, family 19 compare
Psyr_4802 -0.5 -2.1 Secretion protein HlyD compare
Psyr_0134 -0.5 -2.4 Aminotransferase, class V compare
Psyr_0175 -0.5 -2.5 conserved hypothetical protein compare
Psyr_0838 -0.5 -1.7 Rieske [2Fe-2S] region compare
Psyr_2249 -0.5 -1.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0319 -0.5 -2.6 conserved hypothetical protein compare
Psyr_1614 -0.5 -0.6 lipid A biosynthesis acyltransferase compare
Psyr_3094 -0.5 -3.0 Periplasmic binding protein compare
Psyr_4020 -0.5 -3.9 Exodeoxyribonuclease I subunit C compare
Psyr_0278 -0.5 -2.4 ABC-3 compare
Psyr_0215 -0.5 -2.9 Exodeoxyribonuclease III xth compare
Psyr_3590 -0.5 -1.9 conserved hypothetical protein compare
Psyr_2030 -0.5 -0.9 Calcium-binding EF-hand compare
Psyr_3199 -0.5 -0.4 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_2017 -0.5 -2.5 Heat shock protein Hsp90:ATP-binding region, ATPase-like protein compare
Psyr_0276 -0.5 -2.0 zinc uptake regulation protein, putative compare
Psyr_1449 -0.5 -1.5 hypothetical protein compare
Psyr_3507 -0.5 -2.0 membrane protein, putative compare
Psyr_0659 -0.5 -2.1 transcriptional regulator, LysR family compare
Psyr_4736 -0.5 -1.1 conserved hypothetical protein compare
Psyr_1567 -0.5 -2.2 Uncharacterized conserved protein UCP006173 compare
Psyr_0267 -0.5 -2.9 Endonuclease/exonuclease/phosphatase compare
Psyr_3465 -0.5 -2.2 Flagellar protein FlaG protein compare
Psyr_0559 -0.5 -2.4 thiosulfate sulfurtransferase compare
Psyr_0074 -0.5 -3.2 diguanylate cyclase/phosphodiesterase compare
Psyr_2829 -0.5 -2.1 conserved hypothetical protein compare
Psyr_4809 -0.5 -1.7 conserved hypothetical protein compare
Psyr_0978 -0.5 -2.8 lipoprotein, putative compare
Psyr_1751 -0.5 -1.5 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_3240 -0.5 -1.3 CTP synthase compare
Psyr_4161 -0.5 -1.0 Rod shape-determining protein MreD compare
Psyr_0485 -0.5 -2.0 Protein of unknown function DUF179 compare
Psyr_0275 -0.5 -2.5 Periplasmic solute binding protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress 6-methoxy-2(3H)-benzoxazolone across organisms