Experiment set18S78 for Pseudomonas syringae pv. syringae B728a

Compare to:

no stress control

200 most important genes:

  gene name fitness t score description  
Psyr_5088 -4.9 -8.7 regulatory protein, LuxR:Response regulator receiver compare
Psyr_5091 -4.2 -19.8 Binding-protein-dependent transport systems inner membrane component compare
Psyr_5089 -3.8 -6.7 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_5090 -3.8 -9.6 ABC transporter compare
Psyr_0857 -3.3 -3.7 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_2900 -3.0 -6.9 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase compare
Psyr_3698 -2.3 -2.2 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_5040 -1.9 -11.8 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3020 -1.9 -2.1 precorrin-4 C11-methyltransferase compare
Psyr_2139 -1.8 -6.3 Kef-type potassium/proton antiporter, CPA2 family compare
Psyr_1638 -1.8 -2.3 RNAse E compare
Psyr_5039 -1.8 -12.0 Binding-protein-dependent transport systems inner membrane component compare
Psyr_5041 -1.7 -10.1 phosphate ABC transporter substrate-binding protein, PhoT family compare
Psyr_0575 -1.7 -1.1 protease FtsH subunit HflC compare
Psyr_1613 -1.6 -3.1 septum site-determining protein MinC compare
Psyr_1762 -1.6 -8.2 conserved hypothetical protein compare
Psyr_4151 -1.6 -1.6 Phosphocarrier HPr protein compare
Psyr_5034 -1.6 -6.9 CBS:Protein of unknown function DUF21:Transporter-associated region compare
Psyr_0293 -1.5 -8.3 Polyphosphate kinase compare
Psyr_2897 -1.5 -4.3 regulatory protein, LuxR:Response regulator receiver compare
Psyr_1749 -1.4 -6.0 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_1419 -1.4 -2.3 preQ(0) biosynthesis protein QueC compare
Psyr_4417 -1.4 -1.5 Ferredoxin--nitrite reductase compare
Psyr_4754 -1.4 -1.2 16S rRNA m(2)G-966 methyltransferase compare
Psyr_0017 -1.3 -3.3 16S rRNA m(5)C-967 methyltransferase compare
Psyr_3425 -1.3 -3.1 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_1400 -1.2 -8.4 outer membrane porin compare
Psyr_4566 -1.2 -4.7 Peptidase M23B compare
Psyr_2253 -1.2 -2.1 Phosphonate metabolism compare
Psyr_0976 -1.2 -2.4 Malate:quinone-oxidoreductase compare
Psyr_4839 -1.1 -7.4 hypothetical protein compare
Psyr_4842 -1.1 -4.2 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_4415 -1.1 -4.7 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase compare
Psyr_3676 -1.1 -2.5 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_4774 -1.1 -2.6 Hypothetical protein compare
Psyr_4464 -1.1 -1.4 lipoprotein, putative compare
Psyr_0549 -1.0 -1.3 Metallophosphoesterase compare
Psyr_0215 -1.0 -5.2 Exodeoxyribonuclease III xth compare
Psyr_2461 -1.0 -3.0 Uncharacterized conserved protein UCP030820 compare
Psyr_5038 -1.0 -5.6 phosphate ABC transporter ATP-binding protein, PhoT family compare
Psyr_2312 -1.0 -1.6 Protein of unknown function DUF24 compare
Psyr_3906 -1.0 -1.6 regulatory protein, DeoR compare
Psyr_4843 -1.0 -2.8 NUDIX hydrolase compare
Psyr_1594 -1.0 -4.5 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_3723 -1.0 -2.8 CDS compare
Psyr_1158 -1.0 -3.7 Gluconate transporter compare
Psyr_3681 -1.0 -1.5 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_5067 -0.9 -2.1 conserved hypothetical protein compare
Psyr_2201 -0.9 -3.4 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family compare
Psyr_0579 -0.9 -4.7 RNAse R compare
Psyr_0811 -0.9 -4.4 Integral membrane protein TerC compare
Psyr_1094 -0.9 -1.8 cold-shock DNA-binding protein family compare
Psyr_1410 -0.9 -2.3 Holliday junction DNA helicase RuvB compare
Psyr_4367 -0.9 -2.6 Iojap-related protein compare
Psyr_3755 -0.9 -1.8 conserved hypothetical protein compare
Psyr_4887 -0.9 -4.4 Peptidase S41A, C-terminal protease compare
Psyr_2117 -0.9 -2.2 conserved hypothetical protein compare
Psyr_2327 -0.9 -3.2 GTP cyclohydrolase subunit MoaA compare
Psyr_3315 -0.9 -1.7 conserved hypothetical protein compare
Psyr_0291 -0.9 -2.4 DedA compare
Psyr_3620 -0.8 -1.5 hypothetical protein compare
Psyr_4158 -0.8 -4.0 conserved hypothetical protein compare
Psyr_0680 -0.8 -2.9 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_3476 -0.8 -2.8 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_5050 -0.8 -2.4 transcriptional regulator, LysR family compare
Psyr_2787 -0.8 -2.6 hypothetical protein compare
Psyr_4424 -0.8 -3.5 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_4476 -0.8 -3.3 dTDP-4-dehydrorhamnose reductase compare
Psyr_2823 -0.8 -1.6 hypothetical protein compare
Psyr_0565 -0.8 -3.8 Protein of unknown function UPF0126 compare
Psyr_4125 -0.8 -1.2 Protein of unknown function DUF1043 compare
Psyr_0982 -0.8 -1.4 conserved hypothetical protein compare
Psyr_4115 -0.8 -1.3 phosphoheptose isomerase compare
Psyr_0497 -0.8 -1.8 LamB/YcsF compare
Psyr_1160 -0.8 -5.1 Uncharacterized protein conserved in bacteria-like protein compare
Psyr_2137 -0.8 -1.7 molybdopterin molybdochelatase compare
Psyr_0364 -0.8 -2.9 sodium/proton antiporter, NhaA family compare
Psyr_0674 -0.7 -1.2 Protein of unknown function UPF0029 compare
Psyr_1408 -0.7 -1.2 Holliday junction endonuclease RuvC compare
Psyr_0278 -0.7 -3.8 ABC-3 compare
Psyr_3282 -0.7 -2.7 transcriptional regulator, TetR family compare
Psyr_1317 -0.7 -1.3 conserved hypothetical protein compare
Psyr_0885 -0.7 -1.1 conserved hypothetical protein compare
Psyr_3680 -0.7 -1.7 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase compare
Psyr_3886 -0.7 -1.0 methionyl-tRNA synthetase compare
Psyr_2202 -0.7 -2.1 ABC transporter compare
Psyr_0573 -0.7 -3.2 GTP-binding protein HflX compare
Psyr_3672 -0.7 -1.4 cobalamin-5'-phosphate synthase compare
Psyr_2925 -0.7 -1.9 Helix-turn-helix motif protein compare
Psyr_0378 -0.7 -2.1 Glycosyl transferase, family 2 compare
Psyr_3446 -0.7 -1.9 Surface presentation of antigens (SPOA) protein compare
Psyr_1786 -0.7 -2.6 membrane protein, putative compare
Psyr_1645 -0.7 -1.9 phosphate:acyl-[acyl carrier protein] acyltransferase compare
Psyr_0533 -0.7 -2.3 conserved hypothetical protein compare
Psyr_0849 -0.7 -2.7 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_3055 -0.7 -1.6 Aminoglycoside phosphotransferase compare
Psyr_3673 -0.7 -0.9 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_2467 -0.6 -2.9 3-methylcrotonoyl-CoA carboxylase, alpha subunit compare
Psyr_1556 -0.6 -1.7 hypothetical protein compare
Psyr_4460 -0.6 -0.9 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_1642 -0.6 -2.4 Maf-like protein compare
Psyr_5130 -0.6 -3.2 chromosome segregation ATPase compare
Psyr_4420 -0.6 -2.2 precorrin-6A reductase compare
Psyr_0791 -0.6 -1.2 MOSC compare
Psyr_0366 -0.6 -3.0 transcriptional regulator, GntR family compare
Psyr_0051 -0.6 -1.7 conserved hypothetical protein compare
Psyr_4122 -0.6 -2.2 AFG1-like ATPase compare
Psyr_5131 -0.6 -2.2 16S rRNA m(7)G-527 methyltransferase compare
Psyr_2469 -0.6 -2.7 Propionyl-CoA carboxylase compare
Psyr_2474 -0.6 -2.0 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region compare
Psyr_0059 -0.6 -3.8 HemY, N-terminal:HemY, N-terminal:HemY, N-terminal compare
Psyr_0519 -0.6 -4.2 Glutamate-ammonia-ligase adenylyltransferase compare
Psyr_1234 -0.6 -2.2 RNA methyltransferase TrmH, group 1 compare
Psyr_0033 -0.6 -1.4 tryptophan synthase, alpha chain compare
Psyr_4830 -0.6 -1.2 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4138 -0.6 -1.8 Toluene tolerance compare
Psyr_0395 -0.6 -1.5 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_3675 -0.6 -1.2 adenosylcobinamide kinase compare
Psyr_4618 -0.6 -1.6 regulatory protein, LuxR:Response regulator receiver compare
Psyr_2464 -0.6 -2.5 methionine synthase (B12-dependent) compare
Psyr_1222 -0.6 -1.1 CDS compare
Psyr_4809 -0.6 -2.1 conserved hypothetical protein compare
Psyr_0983 -0.6 -2.5 Protein of unknown function DUF159 compare
Psyr_4333 -0.6 -2.2 Cation efflux protein compare
Psyr_2141 -0.6 -1.0 hypothetical protein compare
Psyr_3338 -0.6 -2.2 gluconate permease GntT compare
Psyr_1407 -0.6 -2.0 Protein of unknown function DUF28 compare
Psyr_3014 -0.6 -1.2 protoporphyrin IX magnesium-chelatase compare
Psyr_0208 -0.6 -3.0 endoribonuclease L-PSP compare
Psyr_3521 -0.6 -2.1 transcriptional regulator, LysR family compare
Psyr_4733 -0.6 -2.6 betaine aldehyde dehydrogenase compare
Psyr_3678 -0.6 -2.0 adenosylcobinamide-phosphate synthase compare
Psyr_0491 -0.6 -1.5 chemotaxis sensory transducer compare
Psyr_2297 -0.6 -2.3 glucose 1-dehydrogenase compare
Psyr_4140 -0.6 -1.1 Protein of unknown function DUF140 compare
Psyr_3694 -0.6 -2.2 MazG, bacterial compare
Psyr_4136 -0.5 -0.8 BolA-like protein compare
Psyr_4408 -0.5 -2.5 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_0769 -0.5 -2.4 conserved hypothetical membrane-anchored protein compare
Psyr_1069 -0.5 -2.2 molybdopterin synthase subunit MoaE compare
Psyr_1946 -0.5 -1.0 diaminobutyrate aminotransferase apoenzyme compare
Psyr_4623 -0.5 -2.9 Aminoglycoside phosphotransferase compare
Psyr_4416 -0.5 -1.2 precorrin-8X methylmutase compare
Psyr_4884 -0.5 -1.9 Rhodanese-like protein compare
Psyr_0936 -0.5 -3.5 Glycosyl transferase, group 1 compare
Psyr_1733 -0.5 -1.0 Peptidyl-prolyl cis-trans isomerase, cyclophilin type compare
Psyr_4808 -0.5 -0.7 conserved hypothetical protein compare
Psyr_3835 -0.5 -1.3 hypothetical protein compare
Psyr_3667 -0.5 -1.4 conserved hypothetical protein compare
Psyr_2446 -0.5 -1.9 MCP methyltransferase, CheR-type compare
Psyr_3631 -0.5 -1.9 GreA/GreB family elongation factor compare
Psyr_4567 -0.5 -1.5 Protein of unknown function UPF0075 compare
Psyr_0174 -0.5 -2.1 Sodium:dicarboxylate symporter compare
Psyr_5135 -0.5 -0.9 Protein of unknown function DUF37 compare
Psyr_3512 -0.5 -2.3 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_1686 -0.5 -2.1 Metallophosphoesterase compare
Psyr_1130 -0.5 -2.1 conserved hypothetical protein compare
Psyr_4683 -0.5 -1.6 dethiobiotin synthase compare
Psyr_4100 -0.5 -2.1 D-alanine--D-alanine ligase compare
Psyr_3179 -0.5 -0.9 DNA translocase FtsK compare
Psyr_4346 -0.5 -2.5 PhoH-like protein compare
Psyr_4015 -0.5 -0.7 conserved domain protein compare
Psyr_0490 -0.5 -2.4 CheW-like protein compare
Psyr_0920 -0.5 -4.2 Glycosyl transferase, group 1 compare
Psyr_4941 -0.5 -1.6 NUDIX hydrolase compare
Psyr_4882 -0.5 -1.8 protein translocase subunit secB compare
Psyr_1202 -0.5 -0.8 negative regulator of hrp expression HrpV compare
Psyr_4944 -0.5 -2.3 transcriptional regulator, LysR family compare
Psyr_0436 -0.5 -1.1 Phosphopantetheine-binding protein compare
Psyr_3183 -0.5 -3.0 ATP-dependent Clp protease ATP-binding subunit ClpA compare
Psyr_2779 -0.5 -1.7 Phage minor tail compare
Psyr_0524 -0.5 -0.8 Lipopolysaccharide kinase compare
Psyr_3848 -0.5 -1.5 L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein compare
Psyr_2393 -0.5 -1.2 Flavin reductase-like protein compare
Psyr_0368 -0.5 -3.1 lipoprotein Blc compare
Psyr_0580 -0.5 -1.3 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_1270 -0.5 -1.0 conserved hypothetical protein compare
Psyr_4093 -0.5 -1.7 glutamate N-acetyltransferase compare
Psyr_1109 -0.5 -2.7 6-phosphogluconate dehydratase compare
Psyr_4939 -0.5 -1.4 conserved hypothetical protein compare
Psyr_0485 -0.5 -2.1 Protein of unknown function DUF179 compare
Psyr_0574 -0.5 -1.1 protease FtsH subunit HflK compare
Psyr_1663 -0.5 -1.7 phosphoribosylanthranilate isomerase compare
Psyr_3142 -0.5 -1.7 general secretion pathway protein N, putative compare
Psyr_3581 -0.5 -2.1 ribosomal large subunit pseudouridine synthase B compare
Psyr_3590 -0.5 -1.9 conserved hypothetical protein compare
Psyr_1984 -0.5 -1.9 3-isopropylmalate dehydratase, small subunit compare
Psyr_1811 -0.5 -1.4 transcriptional regulator, GntR family compare
Psyr_0809 -0.5 -2.5 stress protein compare
Psyr_3674 -0.5 -0.5 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_2143 -0.5 -1.0 delta1-piperideine 2-carboxylate reductase compare
Psyr_0338 -0.5 -2.0 ABC transporter compare
Psyr_2471 -0.5 -0.9 hydroxymethylglutaryl-CoA lyase compare
Psyr_2679 -0.5 -1.6 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4466 -0.5 -1.9 Thioredoxin compare
Psyr_1074 -0.5 -3.1 amino acid ABC transporter membrane protein 2, PAAT family compare
Psyr_3181 -0.5 -1.9 Arginyltransferase compare
Psyr_2151 -0.5 -1.1 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_2069 -0.5 -1.1 conserved hypothetical protein compare
Psyr_1720 -0.4 -1.4 Protein of unknown function DUF58 compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in no stress control experiments