Experiment set18S78 for Pseudomonas syringae pv. syringae B728a

Compare to:

no stress control

200 most detrimental genes:

  gene name fitness t score description  
Psyr_0383 +1.6 2.1 Twin-arginine translocation protein TatB compare
Psyr_3208 +1.4 3.0 NADH dehydrogenase subunit M compare
Psyr_1269 +1.3 3.5 phosphoribosylformylglycinamidine synthase compare
Psyr_1668 +1.3 5.7 amidophosphoribosyltransferase compare
Psyr_0822 +1.2 1.6 1-phosphofructokinase compare
Psyr_2562 +1.1 3.1 hypothetical protein compare
Psyr_3952 +1.1 3.3 conserved hypothetical protein compare
Psyr_1021 +1.0 5.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_3567 +1.0 2.1 L-arginine ABC transporter ATP-binding protein / L-ornithine ABC transporter ATP-binding protein compare
Psyr_3287 +1.0 2.3 DNA topoisomerase I compare
Psyr_4490 +0.9 2.5 transcriptional regulator, DeoR family compare
Psyr_4634 +0.9 1.5 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_1097 +0.9 2.6 glycine cleavage system H protein compare
Psyr_0525 +0.9 5.0 Lipopolysaccharide kinase compare
Psyr_4380 +0.9 2.6 translation initiation factor 1 (eIF-1/SUI1) compare
Psyr_4407 +0.9 2.1 phosphoribosylamine--glycine ligase compare
Psyr_0356 +0.9 1.9 L-cystine ABC transporter ATP-binding protein / Diaminopimelate ABC transporter ATP-binding protein compare
Psyr_4932 +0.9 6.2 agmatine deiminase compare
Psyr_4786 +0.9 1.2 hypothetical protein compare
Psyr_5072 +0.9 1.3 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_4637 +0.9 3.6 acyl-phosphate glycerol-3-phosphate acyltransferase compare
Psyr_1067 +0.8 1.4 GTP cyclohydrolase subunit MoaC compare
Psyr_3905 +0.8 5.1 glycerol kinase compare
Psyr_3552 +0.8 1.8 Divalent cation transporter compare
Psyr_0726 +0.8 3.3 ribosomal large subunit pseudouridine synthase D compare
Psyr_1121 +0.8 1.4 6-phosphogluconolactonase compare
Psyr_4278 +0.8 2.9 regulatory protein, LuxR compare
Psyr_1019 +0.8 3.3 Dihydroneopterin aldolase compare
Psyr_0907 +0.8 2.6 conserved hypothetical protein compare
Psyr_2223 +0.8 2.8 sarcosine oxidase, delta subunit compare
Psyr_2468 +0.8 1.6 Enoyl-CoA hydratase/isomerase compare
Psyr_3837 +0.8 2.8 conserved hypothetical protein compare
Psyr_0550 +0.8 3.8 Protein of unknown function UPF0227 compare
Psyr_4491 +0.8 1.4 Deoxyribose-phosphate aldolase compare
Psyr_4498 +0.7 1.8 outer membrane transport energization protein ExbD compare
Psyr_3423 +0.7 6.0 coproporphyrinogen III oxidase, anaerobic compare
Psyr_1968 +0.7 2.2 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_1688 +0.7 1.6 Protein of unknown function DUF1315 compare
Psyr_2118 +0.7 2.4 protein of unknown function DUF883 compare
Psyr_4920 +0.7 1.4 conserved hypothetical bacteriophage protein compare
Psyr_4933 +0.7 3.9 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_0132 +0.7 2.7 conserved hypothetical protein compare
Psyr_1614 +0.7 1.1 lipid A biosynthesis acyltransferase compare
Psyr_3946 +0.7 3.3 Proteobacterial methyltransferase compare
Psyr_4381 +0.6 5.6 arginine decarboxylase compare
Psyr_4112 +0.6 4.5 Protein of unknown function UPF0011 compare
Psyr_2955 +0.6 2.0 Surfeit locus 4-related protein compare
Psyr_3202 +0.6 0.8 NADH dehydrogenase subunit G compare
Psyr_0453 +0.6 3.8 16S rRNA m(3)U-1498 methyltransferase compare
Psyr_4860 +0.6 1.0 Integrase, catalytic region compare
Psyr_2984 +0.6 1.7 conserved hypothetical protein compare
Psyr_0371 +0.6 4.5 conserved hypothetical protein compare
Psyr_1671 +0.6 3.2 lipoprotein, putative compare
Psyr_1662 +0.6 3.5 tRNA pseudouridine synthase compare
Psyr_3904 +0.6 3.6 Major intrinsic protein compare
Psyr_3876 +0.6 5.3 amino acid ABC transporter membrane protein 2, PAAT family compare
Psyr_1198 +0.6 1.2 type III secretion protein HrpF compare
Psyr_2552 +0.6 1.7 cyclase/dehydrase compare
Psyr_3947 +0.6 1.7 Methyltransferase, putative compare
Psyr_2870 +0.6 1.4 CDS compare
Psyr_1633 +0.6 1.7 MotA/TolQ/ExbB proton channel compare
Psyr_2031 +0.6 2.1 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_4255 +0.6 2.4 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_3958 +0.6 3.7 RNA polymerase, sigma-24 subunit, RpoE compare
Psyr_0243 +0.6 2.7 cyclic nucleotide-binding protein compare
Psyr_0746 +0.6 2.9 IS66 Orf2 like protein compare
Psyr_0252 +0.6 2.9 adenylate cyclase compare
Psyr_3082 +0.6 2.7 MltA-interacting MipA compare
Psyr_2942 +0.6 2.9 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_4674 +0.6 2.7 Radical SAM compare
Psyr_3878 +0.5 3.0 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_0831 +0.5 1.0 Two-component response regulator CbrB compare
Psyr_2360 +0.5 1.2 CBS compare
Psyr_0199 +0.5 1.6 Glutathione-dependent formaldehyde-activating, GFA compare
Psyr_3889 +0.5 1.2 conserved hypothetical protein compare
Psyr_2540 +0.5 1.6 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_0178 +0.5 1.6 regulator of nucleoside diphosphate kinase compare
Psyr_2375 +0.5 2.3 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_1832 +0.5 1.6 Exonuclease compare
Psyr_1802 +0.5 1.1 transcriptional regulator, AsnC family compare
Psyr_4911 +0.5 3.0 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_4463 +0.5 1.9 Protein of unknown function DUF193 compare
Psyr_0160 +0.5 2.8 GCN5-related N-acetyltransferase compare
Psyr_4130 +0.5 3.7 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF compare
Psyr_0511 +0.5 2.3 conserved hypothetical protein compare
Psyr_0373 +0.5 0.9 CDS compare
Psyr_3742 +0.5 3.6 FAD dependent oxidoreductase:Protein of unknown function DUF752 compare
Psyr_4739 +0.5 3.5 tRNA (guanine-N(7)-)-methyltransferase compare
Psyr_3569 +0.5 3.9 L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein compare
Psyr_1193 +0.5 1.1 type III helper protein HrpZ1 compare
Psyr_2324 +0.5 2.1 conserved hypothetical protein compare
Psyr_3874 +0.5 2.9 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_3288 +0.5 2.5 conserved hypothetical protein compare
Psyr_3278 +0.5 2.9 Endonuclease/exonuclease/phosphatase compare
Psyr_2498 +0.5 2.7 GCN5-related N-acetyltransferase compare
Psyr_0546 +0.5 2.5 lipoprotein, putative compare
Psyr_1153 +0.5 2.6 Zinc-containing alcohol dehydrogenase superfamily compare
Psyr_1004 +0.5 1.9 nucleoside ABC transporter membrane protein compare
Psyr_2264 +0.5 1.6 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_4682 +0.5 1.6 conserved hypothetical protein compare
Psyr_3875 +0.5 3.9 amino acid ABC transporter membrane protein 1, PAAT family compare
Psyr_2245 +0.5 1.8 conserved domain protein compare
Psyr_3193 +0.5 1.0 Transcription factor jumonji, jmjC compare
Psyr_4259 +0.5 3.8 ATP-dependent protease, putative compare
Psyr_3600 +0.5 1.2 transcriptional regulator, LysR family compare
Psyr_0147 +0.5 2.2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein compare
Psyr_3498 +0.5 3.4 Conserved hypothetical protein 730 compare
Psyr_4062 +0.5 1.4 Pyridoxamine 5'-phosphate oxidase-related protein compare
Psyr_0735 +0.5 0.9 Peptidase S24, S26A and S26B compare
Psyr_0545 +0.5 0.9 Permease for cytosine/purines, uracil, thiamine, allantoin compare
Psyr_4289 +0.5 2.1 Protein of unknown function Zinc binding 2 compare
Psyr_4414 +0.5 1.4 precorrin-3 methyltransferase compare
Psyr_1138 +0.5 1.1 GCN5-related N-acetyltransferase compare
Psyr_0411 +0.5 4.1 glutamate synthase (NADPH) large subunit compare
Psyr_3571 +0.5 2.3 L-arginine-binding protein / L-ornithine-binding protein compare
Psyr_2088 +0.5 1.1 2-methylaconitate cis-trans isomerase compare
Psyr_1447 +0.5 1.4 conserved hypothetical protein compare
Psyr_1580 +0.5 2.9 AAA ATPase, central region:AAA ATPase, central region compare
Psyr_3377 +0.4 1.4 transcriptional regulator, MarR family compare
Psyr_0784 +0.4 1.2 CheW-like protein compare
Psyr_0833 +0.4 2.0 conserved hypothetical protein compare
Psyr_3857 +0.4 1.8 conserved hypothetical protein compare
Psyr_2534 +0.4 2.0 Carboxymethylenebutenolidase compare
Psyr_1875 +0.4 1.1 Enoyl-CoA hydratase/isomerase compare
Psyr_4300 +0.4 1.4 DNA polymerase III, epsilon subunit compare
Psyr_3286 +0.4 3.1 conserved hypothetical protein compare
Psyr_1616 +0.4 1.2 Rieske [2Fe-2S] region compare
Psyr_4953 +0.4 1.7 Uncharacterized conserved protein UCP028301 compare
Psyr_4836 +0.4 3.0 N-formylglutamate deformylase compare
Psyr_3013 +0.4 0.5 magnesium chelatase subunit ChlD compare
Psyr_3548 +0.4 2.2 Glutathione S-transferase, N-terminal compare
Psyr_3397 +0.4 1.5 transcriptional regulator, LysR family compare
Psyr_2039 +0.4 1.4 Fimbrial protein compare
Psyr_0498 +0.4 1.4 Protein of unknown function DUF1445 compare
Psyr_0566 +0.4 3.2 4Fe-4S cluster binding protein compare
Psyr_4912 +0.4 2.7 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_3106 +0.4 2.3 phosphate ABC transporter substrate-binding protein, PhoT family compare
Psyr_4050 +0.4 1.2 Protein of unknown function DUF479 compare
Psyr_3296 +0.4 1.2 MOSC:MOSC, N-terminal beta barrel compare
Psyr_4418 +0.4 0.8 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_4044 +0.4 1.7 Phospholipase D/Transphosphatidylase compare
Psyr_3107 +0.4 1.2 conserved hypothetical protein compare
Psyr_0437 +0.4 1.3 acyl carrier protein, putative compare
Psyr_2807 +0.4 1.2 NinB compare
Psyr_1108 +0.4 2.8 glyceraldehyde-3-phosphate dehydrogenase compare
Psyr_1152 +0.4 1.1 transcriptional regulator, ArsR family compare
Psyr_2820 +0.4 1.5 RecT protein compare
Psyr_2963 +0.4 2.0 amino acid ABC transporter membrane protein 1, PAAT family compare
Psyr_2318 +0.4 1.4 CDS compare
Psyr_0046 +0.4 1.3 conserved hypothetical protein compare
Psyr_1779 +0.4 1.4 hypothetical protein compare
Psyr_0736 +0.4 1.1 umuC protein compare
Psyr_0376 +0.4 1.2 D-tyrosyl-tRNA(Tyr) deacylase compare
Psyr_4260 +0.4 1.9 conserved hypothetical protein compare
Psyr_1864 +0.4 1.2 spermidine synthase compare
Psyr_2285 +0.4 0.8 Twin-arginine translocation pathway signal compare
Psyr_1022 +0.4 0.9 conserved hypothetical protein compare
Psyr_4967 +0.4 1.3 conserved hypothetical protein compare
Psyr_3135 +0.4 1.4 transcriptional regulator, GntR family compare
Psyr_0069 +0.4 2.2 Na+/Pi-cotransporter:Na/Pi cotransporter II-related protein compare
Psyr_1887 +0.4 1.6 CDS compare
Psyr_2049 +0.4 1.2 K+ transporting ATPase, KdpC subunit compare
Psyr_1728 +0.4 1.1 tRNA--hydroxylase compare
Psyr_2067 +0.4 0.8 ABC transporter compare
Psyr_4902 +0.4 1.2 Protein of unknown function DUF495 compare
Psyr_0650 +0.4 2.3 Protein of unknown function RIO1 compare
Psyr_1175 +0.4 2.5 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_2403 +0.4 1.6 Protein of unknown function DUF1330 compare
Psyr_0446 +0.4 1.1 Malonate decarboxylase gamma subunit compare
Psyr_5032 +0.4 2.1 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_4285 +0.4 0.9 Ferredoxin:[2Fe-2S]-binding protein compare
Psyr_0142 +0.4 1.5 ABC transporter compare
Psyr_3117 +0.4 2.4 lipoprotein, putative compare
Psyr_0955 +0.4 2.3 membrane protein, putative compare
Psyr_1987 +0.4 1.0 2-keto-3-deoxygalactonate kinase compare
Psyr_2242 +0.4 1.5 conserved hypothetical protein compare
Psyr_1227 +0.4 0.4 Queuosine biosynthesis protein compare
Psyr_1796 +0.4 1.5 GCN5-related N-acetyltransferase compare
Psyr_2951 +0.4 2.4 transcriptional regulator, LysR family compare
Psyr_3324 +0.4 1.5 transcriptional regulator, TetR family compare
Psyr_5071 +0.4 1.9 conserved hypothetical protein compare
Psyr_4030 +0.4 2.5 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_1748 +0.4 1.5 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_4793 +0.4 1.7 transcriptional regulator, ArsR family compare
Psyr_1999 +0.4 1.0 OmpA/MotB compare
Psyr_3760 +0.4 1.8 VacJ-like lipoprotein compare
Psyr_4576 +0.4 1.7 OsmC-like protein compare
Psyr_3640 +0.3 1.1 conserved hypothetical protein compare
Psyr_3482 +0.3 1.7 Protein of unknown function DUF1348 compare
Psyr_2121 +0.3 1.6 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_4789 +0.3 0.9 lipoprotein, putative compare
Psyr_1609 +0.3 1.9 Aspartyl aminopeptidase compare
Psyr_3658 +0.3 2.1 Rhodanese-like protein compare
Psyr_3191 +0.3 1.1 Protein of unknown function DUF489 compare
Psyr_1190 +0.3 1.4 type III transcriptional regulator HrpR compare
Psyr_4799 +0.3 2.0 Heavy metal sensor kinase compare
Psyr_3091 +0.3 1.6 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_2441 +0.3 1.6 transcriptional regulator, AraC family compare
Psyr_1629 +0.3 1.3 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_0081 +0.3 0.7 ABC transporter compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in no stress control experiments