Experiment set18S77 for Pseudomonas syringae pv. syringae B728a

Compare to:

no stress control

200 most detrimental genes:

  gene name fitness t score description  
Psyr_0383 +1.6 2.1 Twin-arginine translocation protein TatB compare
Psyr_1668 +1.5 6.2 amidophosphoribosyltransferase compare
Psyr_1121 +1.2 2.0 6-phosphogluconolactonase compare
Psyr_3567 +1.2 3.2 L-arginine ABC transporter ATP-binding protein / L-ornithine ABC transporter ATP-binding protein compare
Psyr_5072 +1.1 1.8 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_3905 +1.1 6.7 glycerol kinase compare
Psyr_1021 +1.0 4.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_1097 +1.0 2.3 glycine cleavage system H protein compare
Psyr_3600 +1.0 3.8 transcriptional regulator, LysR family compare
Psyr_3739 +1.0 2.2 conserved hypothetical protein compare
Psyr_4460 +1.0 2.1 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_0081 +1.0 2.5 ABC transporter compare
Psyr_3701 +0.9 2.7 thioredoxin, putative compare
Psyr_1662 +0.9 5.0 tRNA pseudouridine synthase compare
Psyr_0735 +0.9 2.7 Peptidase S24, S26A and S26B compare
Psyr_4933 +0.9 5.5 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_3199 +0.9 1.6 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_3837 +0.9 1.8 conserved hypothetical protein compare
Psyr_0907 +0.8 1.9 conserved hypothetical protein compare
Psyr_3946 +0.8 3.1 Proteobacterial methyltransferase compare
Psyr_1333 +0.8 3.7 UBA/THIF-type NAD/FAD binding fold protein compare
Psyr_1907 +0.8 1.4 GTP cyclohydrolase I compare
Psyr_1748 +0.8 3.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_4932 +0.8 5.6 agmatine deiminase compare
Psyr_1039 +0.8 2.5 FecR protein compare
Psyr_1573 +0.8 2.5 cyclic nucleotide-binding protein compare
Psyr_5029 +0.8 1.9 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_3934 +0.8 2.2 Short-chain dehydrogenase/reductase SDR compare
Psyr_1019 +0.7 2.8 Dihydroneopterin aldolase compare
Psyr_1212 +0.7 2.5 type III secretion protein HrpO compare
Psyr_3423 +0.7 5.9 coproporphyrinogen III oxidase, anaerobic compare
Psyr_3673 +0.7 1.3 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_1540 +0.7 3.3 hypothetical protein compare
Psyr_3050 +0.7 3.8 Aldo/keto reductase compare
Psyr_4911 +0.7 3.2 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_0726 +0.7 2.6 ribosomal large subunit pseudouridine synthase D compare
Psyr_4381 +0.7 5.7 arginine decarboxylase compare
Psyr_4682 +0.7 1.5 conserved hypothetical protein compare
Psyr_3287 +0.6 1.5 DNA topoisomerase I compare
Psyr_2973 +0.6 1.9 Glyoxalase I compare
Psyr_3904 +0.6 3.8 Major intrinsic protein compare
Psyr_4836 +0.6 4.2 N-formylglutamate deformylase compare
Psyr_2088 +0.6 0.7 2-methylaconitate cis-trans isomerase compare
Psyr_3874 +0.6 3.6 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_1304 +0.6 1.6 CheW-like protein compare
Psyr_4285 +0.6 1.3 Ferredoxin:[2Fe-2S]-binding protein compare
Psyr_3571 +0.6 3.8 L-arginine-binding protein / L-ornithine-binding protein compare
Psyr_3947 +0.6 1.3 Methyltransferase, putative compare
Psyr_4404 +0.6 1.4 tRNA-U20-dihydrouridine synthase compare
Psyr_4294 +0.6 2.0 Histone deacetylase family protein compare
Psyr_4300 +0.6 1.3 DNA polymerase III, epsilon subunit compare
Psyr_4490 +0.6 1.3 transcriptional regulator, DeoR family compare
Psyr_0784 +0.6 1.3 CheW-like protein compare
Psyr_3342 +0.6 1.5 conserved hypothetical protein compare
Psyr_0858 +0.6 1.0 conserved hypothetical protein compare
Psyr_2590 +0.6 2.5 Periplasmic binding protein compare
Psyr_4050 +0.6 2.3 Protein of unknown function DUF479 compare
Psyr_4920 +0.6 1.6 conserved hypothetical bacteriophage protein compare
Psyr_0170 +0.6 2.2 heat shock protein Hsp15 compare
Psyr_4259 +0.6 4.5 ATP-dependent protease, putative compare
Psyr_4255 +0.6 2.1 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_3566 +0.6 2.6 transcriptional regulator, AraC family compare
Psyr_0833 +0.6 2.2 conserved hypothetical protein compare
Psyr_2468 +0.6 1.2 Enoyl-CoA hydratase/isomerase compare
Psyr_2984 +0.5 1.2 conserved hypothetical protein compare
Psyr_0550 +0.5 2.4 Protein of unknown function UPF0227 compare
Psyr_2808 +0.5 1.0 hypothetical protein compare
Psyr_0498 +0.5 1.5 Protein of unknown function DUF1445 compare
Psyr_3878 +0.5 3.8 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_3674 +0.5 1.1 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_2285 +0.5 0.9 Twin-arginine translocation pathway signal compare
Psyr_1968 +0.5 1.6 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_1779 +0.5 1.6 hypothetical protein compare
Psyr_3597 +0.5 0.9 ABC transporter compare
Psyr_1987 +0.5 2.1 2-keto-3-deoxygalactonate kinase compare
Psyr_1717 +0.5 2.1 TPR repeat:von Willebrand factor, type A compare
Psyr_4978 +0.5 2.1 hypothetical protein compare
Psyr_2927 +0.5 1.3 transcriptional regulator, TetR family compare
Psyr_0896 +0.5 2.0 Aldose 1-epimerase compare
Psyr_1271 +0.5 2.6 ErfK/YbiS/YcfS/YnhG compare
Psyr_4112 +0.5 3.6 Protein of unknown function UPF0011 compare
Psyr_3475 +0.5 1.5 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_3876 +0.5 4.2 amino acid ABC transporter membrane protein 2, PAAT family compare
Psyr_2471 +0.5 1.1 hydroxymethylglutaryl-CoA lyase compare
Psyr_2564 +0.5 2.0 transcriptional regulator, GntR family compare
Psyr_1728 +0.5 1.4 tRNA--hydroxylase compare
Psyr_1152 +0.5 1.3 transcriptional regulator, ArsR family compare
Psyr_0822 +0.5 0.5 1-phosphofructokinase compare
Psyr_3555 +0.5 0.8 aspartate kinase compare
Psyr_3000 +0.5 1.7 methyltransferase, putative compare
Psyr_0765 +0.5 2.6 conserved hypothetical protein compare
Psyr_4344 +0.5 2.7 conserved hypothetical protein compare
Psyr_1783 +0.5 1.6 CDS compare
Psyr_1037 +0.5 2.2 ribosomal subunit interface protein, putative compare
Psyr_3397 +0.5 1.7 transcriptional regulator, LysR family compare
Psyr_4739 +0.5 3.0 tRNA (guanine-N(7)-)-methyltransferase compare
Psyr_2795 +0.5 2.4 conserved hypothetical protein compare
Psyr_0986 +0.5 1.9 16S rRNA m(2)G 1207 methyltransferase compare
Psyr_3857 +0.5 1.6 conserved hypothetical protein compare
Psyr_2942 +0.5 1.9 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_4391 +0.5 1.8 type II and III secretion system protein compare
Psyr_0371 +0.5 3.3 conserved hypothetical protein compare
Psyr_3569 +0.5 3.5 L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein compare
Psyr_4716 +0.5 1.0 Sarcosine oxidase, gamma subunit, heterotetrameric compare
Psyr_2406 +0.5 1.8 Flavin reductase-like protein compare
Psyr_3198 +0.5 0.8 NADH dehydrogenase subunit B compare
Psyr_2820 +0.5 1.9 RecT protein compare
Psyr_2225 +0.4 2.1 methenyltetrahydrofolate cyclohydrolase / 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) compare
Psyr_3082 +0.4 2.2 MltA-interacting MipA compare
Psyr_2275 +0.4 1.9 glutamate synthase (NADPH) GltB3 subunit compare
Psyr_4130 +0.4 3.0 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF compare
Psyr_3473 +0.4 1.5 Flagellar P-ring protein compare
Psyr_0447 +0.4 1.2 malonate decarboxylase subunit, putative compare
Psyr_2540 +0.4 1.4 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_1972 +0.4 1.7 conserved hypothetical protein compare
Psyr_3709 +0.4 2.4 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_2708 +0.4 1.7 Rieske [2Fe-2S] region compare
Psyr_2031 +0.4 1.8 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_0385 +0.4 1.7 phosphoribosyl-ATP pyrophosphatase compare
Psyr_3007 +0.4 1.2 Protein of unknown function DUF1294 compare
Psyr_4015 +0.4 0.8 conserved domain protein compare
Psyr_0954 +0.4 1.2 Protein of unknown function UPF0153 compare
Psyr_0350 +0.4 0.7 ABC transporter compare
Psyr_3896 +0.4 1.2 BFD-like [2Fe-2S]-binding region compare
Psyr_2705 +0.4 2.4 Helix-turn-helix motif protein compare
Psyr_0453 +0.4 2.0 16S rRNA m(3)U-1498 methyltransferase compare
Psyr_0863 +0.4 2.1 PhnA protein compare
Psyr_0960 +0.4 1.9 conserved hypothetical protein compare
Psyr_0173 +0.4 2.5 SSU ribosomal protein S6P modification protein compare
Psyr_0639 +0.4 1.7 lipoprotein, putative compare
Psyr_3840 +0.4 1.2 conserved hypothetical protein compare
Psyr_0690 +0.4 1.6 3-hydroxyisobutyrate dehydrogenase compare
Psyr_1610 +0.4 1.8 ribosomal large subunit pseudouridine synthase A compare
Psyr_2785 +0.4 2.2 conserved hypothetical protein compare
Psyr_4463 +0.4 1.3 Protein of unknown function DUF193 compare
Psyr_2264 +0.4 0.8 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_4637 +0.4 2.3 acyl-phosphate glycerol-3-phosphate acyltransferase compare
Psyr_2118 +0.4 1.1 protein of unknown function DUF883 compare
Psyr_4044 +0.4 1.8 Phospholipase D/Transphosphatidylase compare
Psyr_0785 +0.4 1.6 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_2424 +0.4 2.1 Integral membrane protein TerC compare
Psyr_3432 +0.4 1.2 MotA/TolQ/ExbB proton channel compare
Psyr_4912 +0.4 2.6 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_1587 +0.4 1.3 Bile acid:sodium symporter compare
Psyr_4183 +0.4 1.0 protein translocase subunit secG compare
Psyr_3286 +0.4 2.6 conserved hypothetical protein compare
Psyr_3842 +0.4 1.8 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_1102 +0.4 2.4 conserved hypothetical protein compare
Psyr_1807 +0.4 1.3 Allantoicase compare
Psyr_1462 +0.4 2.0 GCN5-related N-acetyltransferase compare
Psyr_2806 +0.4 1.3 Bacteriophage Lambda NinG compare
Psyr_3289 +0.4 0.8 3-ketoacyl-CoA thiolase compare
Psyr_0511 +0.4 1.2 conserved hypothetical protein compare
Psyr_1843 +0.4 0.9 Protein of unknown function DUF1311 compare
Psyr_0729 +0.4 1.7 CDS compare
Psyr_1978 +0.4 1.7 Thioesterase superfamily compare
Psyr_2278 +0.4 1.4 luciferase compare
Psyr_0838 +0.4 0.9 Rieske [2Fe-2S] region compare
Psyr_3998 +0.4 2.6 Heat shock protein DnaJ, N-terminal compare
Psyr_1023 +0.4 1.7 conserved hypothetical protein compare
Psyr_2562 +0.4 1.2 hypothetical protein compare
Psyr_2872 +0.4 1.4 hypothetical protein compare
Psyr_1449 +0.4 1.6 hypothetical protein compare
Psyr_1017 +0.4 1.1 type III effector HopJ1 compare
Psyr_0436 +0.4 0.7 Phosphopantetheine-binding protein compare
Psyr_3103 +0.4 1.2 phosphate ABC transporter ATP-binding protein, PhoT family compare
Psyr_4881 +0.4 1.2 RNA methyltransferase TrmH, group 2 compare
Psyr_0566 +0.4 2.5 4Fe-4S cluster binding protein compare
Psyr_3742 +0.4 2.4 FAD dependent oxidoreductase:Protein of unknown function DUF752 compare
Psyr_2531 +0.4 1.7 transcriptional regulator, LysR family compare
Psyr_5032 +0.4 2.2 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_2348 +0.4 1.3 hypothetical protein compare
Psyr_0376 +0.4 1.0 D-tyrosyl-tRNA(Tyr) deacylase compare
Psyr_1447 +0.4 0.8 conserved hypothetical protein compare
Psyr_0411 +0.4 3.2 glutamate synthase (NADPH) large subunit compare
Psyr_1210 +0.4 1.9 type III secretion protein HrcQa compare
Psyr_1050 +0.4 1.1 conserved hypothetical protein compare
Psyr_2999 +0.4 1.4 LmbE-like protein compare
Psyr_4092 +0.4 1.4 Glutathione S-transferase, N-terminal compare
Psyr_3932 +0.4 1.2 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_2719 +0.4 1.4 transcriptional regulator, TetR family compare
Psyr_4586 +0.4 1.5 tail protein, putative compare
Psyr_0470 +0.4 1.1 conserved hypothetical protein compare
Psyr_1796 +0.4 0.7 GCN5-related N-acetyltransferase compare
Psyr_2836 +0.4 2.0 hypothetical protein compare
Psyr_4793 +0.4 2.0 transcriptional regulator, ArsR family compare
Psyr_1511 +0.4 1.3 type II secretion system protein E compare
Psyr_0176 +0.4 0.4 conserved hypothetical protein compare
Psyr_3568 +0.3 1.8 Succinylglutamate desuccinylase/aspartoacylase compare
Psyr_1975 +0.3 0.9 Integrase, catalytic region compare
Psyr_3915 +0.3 1.2 Alpha/beta hydrolase fold protein compare
Psyr_3369 +0.3 1.3 Twin-arginine translocation pathway signal:Tat-translocated enzyme:Dyp-type peroxidase compare
Psyr_3542 +0.3 1.9 Short-chain dehydrogenase/reductase SDR compare
Psyr_4740 +0.3 2.0 thiazole-phosphate synthase compare
Psyr_0746 +0.3 0.9 IS66 Orf2 like protein compare
Psyr_3105 +0.3 1.5 phosphate ABC transporter membrane protein 1, PhoT family compare
Psyr_2075 +0.3 1.8 5-nucleotidase compare
Psyr_1190 +0.3 1.3 type III transcriptional regulator HrpR compare
Psyr_1722 +0.3 1.3 Amidohydrolase 2 compare
Psyr_3458 +0.3 0.4 Flagellar hook-basal body complex protein FliE compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in no stress control experiments