Experiment set18S427 for Ralstonia solanacearum GMI1000

Compare to:

L-Aspartic Acid carbon source

200 most important genes:

  gene name fitness t score description  
RS_RS08265 -6.1 -3.4 phosphoserine phosphatase SerB compare
RS_RS02250 -5.9 -8.1 FAD-linked oxidase compare
RS_RS04490 -5.9 -9.0 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
RS_RS02380 -5.7 -3.1 Glu/Leu/Phe/Val dehydrogenase compare
RS_RS06650 -5.4 -4.7 pyridoxal phosphate-dependent aminotransferase compare
RS_RS24735 -5.3 -12.6 hypothetical protein compare
RS_RS00135 -5.2 -6.2 homoserine O-acetyltransferase compare
RS_RS12180 -5.1 -9.8 CysB family HTH-type transcriptional regulator compare
RS_RS22445 -5.1 -1.7 trehalose-phosphatase compare
RS_RS04495 -4.8 -7.9 prephenate dehydratase compare
RS_RS07885 -4.5 -1.5 chorismate synthase compare
RS_RS00555 -4.3 -9.7 phosphomethylpyrimidine synthase compare
RS_RS08150 -3.7 -1.2 tRNA-Met compare
RS_RS11945 -3.6 -2.9 iron-sulfur cluster carrier protein ApbC compare
RS_RS11005 -3.5 -8.6 nicotinate-nucleotide adenylyltransferase compare
RS_RS14570 -3.5 -3.9 glucan biosynthesis protein H compare
RS_RS02605 -3.5 -6.4 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase compare
RS_RS12290 -3.5 -2.3 nicotinate-nucleotide diphosphorylase (carboxylating) compare
RS_RS12295 -3.4 -9.0 quinolinate synthase compare
RS_RS06760 -3.4 -2.9 CysB family HTH-type transcriptional regulator compare
RS_RS11780 -3.4 -4.6 NAD+ synthase compare
RS_RS12155 -3.3 -5.4 sulfate adenylyltransferase subunit CysD compare
RS_RS01735 -3.2 -1.8 S41 family peptidase compare
RS_RS04505 -3.2 -6.1 prephenate dehydrogenase/arogenate dehydrogenase family protein compare
RS_RS14885 -3.2 -3.0 shikimate kinase compare
RS_RS02375 -3.2 -5.7 LysR family transcriptional regulator compare
RS_RS14430 -3.1 -14.1 anthranilate synthase component I compare
RS_RS12145 -3.1 -2.1 uroporphyrinogen-III C-methyltransferase compare
RS_RS02430 -3.1 -4.4 OsmC family protein compare
RS_RS23550 -2.9 -0.9 MFS transporter compare
RS_RS12150 -2.9 -4.0 sulfate adenylyltransferase subunit 1 compare
RS_RS05680 -2.9 -0.9 threonylcarbamoyl-AMP synthase compare
RS_RS00460 -2.9 -2.0 methylenetetrahydrofolate reductase [NAD(P)H] compare
RS_RS12170 -2.8 -1.9 nitrite/sulfite reductase compare
RS_RS19690 -2.8 -0.9 Rrf2 family transcriptional regulator compare
RS_RS16315 -2.7 -0.9 hypothetical protein compare
RS_RS18685 -2.7 -1.5 Cd(II)/Pb(II)-responsive transcriptional regulator compare
RS_RS22805 -2.7 -1.2 hypothetical protein compare
RS_RS16755 -2.7 -1.7 ABC transporter ATP-binding protein compare
RS_RS25285 -2.7 -0.9 hypothetical protein compare
RS_RS16505 -2.7 -4.7 glycine cleavage system protein H compare
RS_RS21285 -2.6 -0.8 type III secretion protein HrpB4 compare
RS_RS13455 -2.6 -1.8 DNA starvation/stationary phase protection protein compare
RS_RS23150 -2.6 -0.8 hypothetical protein compare
RS_RS26320 -2.6 -2.2 DUF1911 domain-containing protein compare
RS_RS12160 -2.4 -1.1 phosphoadenylyl-sulfate reductase compare
RS_RS02105 -2.4 -0.8 hypothetical protein compare
RS_RS01705 -2.4 -0.9 PTS fructose transporter subunit IIA compare
RS_RS13320 -2.4 -3.9 3-deoxy-7-phosphoheptulonate synthase compare
RS_RS04510 -2.3 -1.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
RS_RS14690 -2.3 -1.6 PDZ domain-containing protein compare
RS_RS21650 -2.3 -0.7 gluconokinase compare
RS_RS18615 -2.3 -0.7 hypothetical protein compare
RS_RS10040 -2.2 -1.3 malate dehydrogenase compare
RS_RS01400 -2.2 -3.0 thiol:disulfide interchange protein DsbA/DsbL compare
RS_RS06280 -2.2 -2.9 polysaccharide deacetylase family protein compare
RS_RS01515 -2.2 -1.5 ferritin compare
RS_RS10440 -2.2 -0.7 RDD family protein compare
RS_RS26045 -2.2 -1.2 hypothetical protein compare
RS_RS16775 -2.2 -4.3 copper-translocating P-type ATPase compare
RS_RS11215 -2.2 -1.9 hypothetical protein compare
RS_RS06115 -2.2 -1.0 GTPase HflX compare
RS_RS18680 -2.2 -1.5 heavy metal translocating P-type ATPase compare
RS_RS06990 -2.1 -6.2 succinyldiaminopimelate transaminase compare
RS_RS02615 -2.1 -0.7 hypothetical protein compare
RS_RS09830 -2.1 -2.6 fumarate hydratase compare
RS_RS14405 -2.1 -1.4 murein transglycosylase compare
RS_RS09975 -2.1 -1.4 tRNA pseudouridine(38-40) synthase TruA compare
RS_RS19870 -2.1 -0.6 site-specific DNA-methyltransferase compare
RS_RS09545 -2.1 -0.6 (2Fe-2S)-binding protein compare
RS_RS22175 -2.1 -0.6 Hpt domain-containing protein compare
RS_RS02640 -2.1 -1.9 PhoH family protein compare
RS_RS07990 -2.0 -1.4 hypothetical protein compare
RS_RS07405 -2.0 -1.2 LysR family transcriptional regulator compare
RS_RS12855 -2.0 -1.4 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
RS_RS09840 -2.0 -6.1 dicarboxylate/amino acid:cation symporter conserved
RS_RS06580 -2.0 -1.0 DUF47 domain-containing protein compare
RS_RS16290 -1.9 -1.5 tRNA-Ala compare
RS_RS12600 -1.9 -1.2 hypothetical protein compare
RS_RS05225 -1.9 -3.2 RNA polymerase sigma factor RpoE compare
RS_RS08890 -1.9 -0.6 bifunctional nicotinamidase/pyrazinamidase compare
RS_RS07080 -1.9 -0.9 RIP metalloprotease RseP compare
RS_RS26275 -1.9 -0.6 hypothetical protein compare
RS_RS13890 -1.9 -3.5 shikimate dehydrogenase compare
RS_RS08255 -1.9 -1.0 hypothetical protein compare
RS_RS04550 -1.9 -2.6 ADP-L-glycero-D-mannoheptose-6-epimerase compare
RS_RS14990 -1.9 -0.6 divalent-cation tolerance protein CutA compare
RS_RS03100 -1.8 -0.6 recombination-associated protein RdgC compare
RS_RS10035 -1.8 -0.6 GntR family transcriptional regulator compare
RS_RS10145 -1.8 -0.6 PaaI family thioesterase compare
RS_RS06285 -1.8 -1.2 sterol desaturase family protein compare
RS_RS13845 -1.8 -4.2 NADP-dependent malic enzyme compare
RS_RS21290 -1.7 -1.1 HrpE/YscL family type III secretion apparatus protein compare
RS_RS20010 -1.7 -1.5 1,2-phenylacetyl-CoA epoxidase subunit B compare
RS_RS04995 -1.7 -0.9 IS5 family transposase compare
RS_RS06995 -1.7 -1.2 hypothetical protein compare
RS_RS08985 -1.7 -1.1 hypothetical protein compare
RS_RS08465 -1.7 -0.5 HNH endonuclease compare
RS_RS07895 -1.7 -1.5 NAD(P)-dependent oxidoreductase compare
RS_RS17175 -1.7 -0.5 DNA (cytosine-5-)-methyltransferase compare
RS_RS07735 -1.7 -0.5 sulfite exporter TauE/SafE family protein compare
RS_RS05455 -1.7 -1.5 GlxA family transcriptional regulator compare
RS_RS23320 -1.7 -0.7 class II fumarate hydratase compare
RS_RS02515 -1.7 -1.6 tRNA dihydrouridine synthase DusB compare
RS_RS03305 -1.7 -0.7 type 4 prepilin peptidase 1 compare
RS_RS20240 -1.6 -1.7 acyl-CoA dehydrogenase compare
RS_RS18160 -1.6 -1.9 hypothetical protein compare
RS_RS17330 -1.6 -0.8 DNA-binding protein compare
RS_RS19165 -1.6 -9.9 TonB-dependent receptor compare
RS_RS00845 -1.6 -1.8 short-chain dehydrogenase compare
RS_RS26095 -1.6 -0.5 hypothetical protein compare
RS_RS01305 -1.6 -6.2 biotin synthase compare
RS_RS12880 -1.6 -0.5 DNA-3-methyladenine glycosylase 2 family protein compare
RS_RS05130 -1.6 -0.6 hypothetical protein compare
RS_RS16090 -1.6 -0.7 hypothetical protein compare
RS_RS05700 -1.6 -0.9 4-hydroxy-tetrahydrodipicolinate synthase compare
RS_RS16165 -1.6 -1.6 hypothetical protein compare
RS_RS09250 -1.5 -4.8 NAD(P)/FAD-dependent oxidoreductase compare
RS_RS02580 -1.5 -2.3 ribosomal RNA small subunit methyltransferase A compare
RS_RS00520 -1.5 -6.9 hypothetical protein compare
RS_RS15325 -1.5 -1.5 membrane protein compare
RS_RS11290 -1.5 -0.5 4-carboxymuconolactone decarboxylase compare
RS_RS04485 -1.5 -1.8 DUF2059 domain-containing protein compare
RS_RS03495 -1.5 -2.0 channel protein TolC compare
RS_RS14890 -1.5 -2.7 type IV pilus secretin PilQ compare
RS_RS07930 -1.5 -3.5 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
RS_RS00350 -1.4 -0.6 peptide deformylase compare
RS_RS03160 -1.4 -0.4 cytochrome c compare
RS_RS03500 -1.4 -3.6 sulfurtransferase compare
RS_RS03685 -1.4 -1.3 protein TolQ compare
RS_RS21300 -1.4 -0.4 type III secretion protein HrpB7 compare
RS_RS00450 -1.4 -2.9 5-formyltetrahydrofolate cyclo-ligase compare
RS_RS08410 -1.4 -1.1 hypothetical protein compare
RS_RS08300 -1.4 -3.2 two-component sensor histidine kinase compare
RS_RS18155 -1.4 -2.2 phytanoyl-CoA dioxygenase compare
RS_RS08335 -1.4 -4.0 AcrB/AcrD/AcrF family protein compare
RS_RS25095 -1.4 -0.4 membrane protein compare
RS_RS06745 -1.4 -5.4 sulfate ABC transporter permease subunit CysT compare
RS_RS16155 -1.4 -1.1 type II toxin-antitoxin system ParD family antitoxin compare
RS_RS06910 -1.4 -3.7 isoaspartyl peptidase/L-asparaginase compare
RS_RS11750 -1.4 -1.6 DNA translocase FtsK compare
RS_RS06040 -1.3 -0.9 LysM peptidoglycan-binding domain-containing protein compare
RS_RS03530 -1.3 -0.7 NADH:flavin oxidoreductase/NADH oxidase compare
RS_RS05485 -1.3 -1.3 diguanylate cyclase compare
RS_RS08220 -1.3 -5.0 class I poly(R)-hydroxyalkanoic acid synthase compare
RS_RS15365 -1.3 -2.4 AGE family epimerase/isomerase compare
RS_RS09935 -1.3 -1.4 colicin V biosynthesis protein compare
RS_RS10060 -1.3 -2.1 bifunctional 2-methylcitrate dehydratase/aconitate hydratase compare
RS_RS01680 -1.3 -0.4 hypothetical protein compare
RS_RS06505 -1.3 -0.8 enoyl-CoA hydratase/isomerase family protein compare
RS_RS09605 -1.3 -0.4 hypothetical protein compare
RS_RS09740 -1.3 -0.4 tail protein X compare
RS_RS06070 -1.3 -0.6 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN compare
RS_RS02860 -1.3 -0.6 phosphoglycerate kinase compare
RS_RS16195 -1.3 -1.0 hypothetical protein compare
RS_RS06700 -1.3 -0.9 sulfate ABC transporter substrate-binding protein compare
RS_RS23715 -1.3 -1.7 cytochrome c5 family protein compare
RS_RS06750 -1.3 -0.9 sulfate ABC transporter permease subunit CysW compare
RS_RS00465 -1.3 -1.9 phage holin family protein compare
RS_RS22880 -1.3 -0.4 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
RS_RS00055 -1.3 -4.0 TetR family transcriptional regulator compare
RS_RS12215 -1.3 -6.3 NAD-dependent dehydratase compare
RS_RS03465 -1.2 -2.2 glycosyl transferase compare
RS_RS25795 -1.2 -0.4 hypothetical protein compare
RS_RS23765 -1.2 -3.1 Lrp/AsnC family transcriptional regulator compare
RS_RS00785 -1.2 -2.0 ornithine--oxo-acid transaminase compare
RS_RS13985 -1.2 -0.4 hemagglutinin compare
RS_RS23265 -1.2 -0.4 hypothetical protein compare
RS_RS11790 -1.2 -1.0 hypothetical protein compare
RS_RS23090 -1.2 -1.2 diguanylate cyclase compare
RS_RS02830 -1.2 -3.2 lipopolysaccharide heptosyltransferase II compare
RS_RS05675 -1.2 -3.9 PHP domain-containing protein compare
RS_RS10425 -1.2 -0.9 RNA polymerase sigma factor compare
RS_RS15960 -1.2 -1.1 cyclic nucleotide-binding protein compare
RS_RS18670 -1.2 -0.3 nuclear transport factor 2 family protein compare
RS_RS00010 -1.2 -2.3 membrane protein insertion efficiency factor YidD compare
RS_RS09990 -1.2 -0.8 3-isopropylmalate dehydrogenase compare
RS_RS13895 -1.2 -2.6 energy transducer TonB compare
RS_RS24560 -1.2 -1.2 DUF1993 domain-containing protein compare
RS_RS07915 -1.2 -0.5 3-hydroxybutyrate dehydrogenase compare
RS_RS01995 -1.2 -1.1 RNase adaptor protein RapZ compare
RS_RS11230 -1.1 -1.5 UTP--glucose-1-phosphate uridylyltransferase compare
RS_RS13770 -1.1 -0.8 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
RS_RS03665 -1.1 -0.5 transcriptional regulator NrdR compare
RS_RS12875 -1.1 -0.5 DNA oxidative demethylase AlkB compare
RS_RS01665 -1.1 -1.7 ATP-dependent protease compare
RS_RS25310 -1.1 -1.5 type II toxin-antitoxin system HigB family toxin compare
RS_RS23885 -1.1 -1.4 protein phosphatase CheZ compare
RS_RS17205 -1.1 -1.8 cold-shock protein compare
RS_RS19525 -1.1 -2.5 efflux RND transporter periplasmic adaptor subunit compare
RS_RS25370 -1.1 -0.7 hypothetical protein compare
RS_RS19660 -1.1 -4.1 divalent metal cation transporter compare
RS_RS21155 -1.1 -2.0 leucine-rich repeat domain-containing protein compare
RS_RS10095 -1.1 -2.6 peroxide stress protein YaaA compare
RS_RS02765 -1.1 -1.1 regulatory protein RecX compare
RS_RS12175 -1.1 -1.4 sulfite exporter TauE/SafE family protein compare
RS_RS03320 -1.1 -1.4 Flp family type IVb pilin compare
RS_RS06375 -1.1 -1.1 cell division protein ZapE compare
RS_RS09015 -1.1 -1.3 type 4 fimbrial biogenesis protein compare
RS_RS10780 -1.1 -1.5 hypothetical protein compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source L-Aspartic Acid in Ralstonia solanacearum GMI1000

For carbon source L-Aspartic Acid across organisms