Experiment set18S423 for Ralstonia solanacearum GMI1000

Compare to:

D-Galactose carbon source

200 most important genes:

  gene name fitness t score description  
RS_RS13795 -6.4 -6.2 arabinose import ATP-binding protein AraG conserved
RS_RS02605 -6.3 -4.3 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase compare
RS_RS04490 -5.6 -7.7 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
RS_RS11840 -5.5 -9.3 phosphoenolpyruvate carboxylase compare
RS_RS10430 -5.5 -3.2 DUF3619 domain-containing protein compare
RS_RS24735 -5.4 -7.5 hypothetical protein compare
RS_RS08265 -5.4 -3.4 phosphoserine phosphatase SerB compare
RS_RS15365 -5.4 -7.4 AGE family epimerase/isomerase compare
RS_RS06650 -5.4 -3.7 pyridoxal phosphate-dependent aminotransferase compare
RS_RS12180 -5.1 -7.7 CysB family HTH-type transcriptional regulator compare
RS_RS13810 -5.0 -9.1 porin conserved
RS_RS13765 -5.0 -9.6 D-galactonate dehydratase conserved
RS_RS02250 -5.0 -7.6 FAD-linked oxidase compare
RS_RS04495 -5.0 -4.9 prephenate dehydratase compare
RS_RS13785 -4.9 -5.8 SMP-30/gluconolactonase/LRE family protein conserved
RS_RS13800 -4.8 -5.7 arabinose ABC transporter substrate-binding protein conserved
RS_RS13775 -4.6 -5.5 short-chain dehydrogenase conserved
RS_RS00135 -4.5 -4.4 homoserine O-acetyltransferase compare
RS_RS14865 -4.4 -5.2 transposase compare
RS_RS07885 -4.1 -1.5 chorismate synthase compare
RS_RS02830 -4.0 -4.0 lipopolysaccharide heptosyltransferase II compare
RS_RS00555 -3.8 -7.2 phosphomethylpyrimidine synthase compare
RS_RS04550 -3.8 -2.8 ADP-L-glycero-D-mannoheptose-6-epimerase compare
RS_RS13770 -3.7 -1.4 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
RS_RS14860 -3.6 -6.6 glutamate synthase subunit alpha compare
RS_RS14430 -3.6 -6.5 anthranilate synthase component I compare
RS_RS12155 -3.6 -3.5 sulfate adenylyltransferase subunit CysD compare
RS_RS04505 -3.6 -4.3 prephenate dehydrogenase/arogenate dehydrogenase family protein compare
RS_RS13790 -3.4 -1.3 L-arabinose ABC transporter permease AraH compare
RS_RS13780 -3.3 -3.2 aldose 1-epimerase compare
RS_RS08050 -3.2 -9.6 PAS domain-containing sensor histidine kinase compare
RS_RS08045 -3.2 -2.4 DNA-binding response regulator compare
RS_RS20405 -3.2 -7.3 EamA/RhaT family transporter compare
RS_RS03365 -3.0 -3.5 response regulator compare
RS_RS13805 -2.9 -1.5 2-dehydro-3-deoxygalactonokinase compare
RS_RS13815 -2.8 -2.7 transcriptional regulator GcvA compare
RS_RS06760 -2.8 -1.9 CysB family HTH-type transcriptional regulator compare
RS_RS11005 -2.8 -6.2 nicotinate-nucleotide adenylyltransferase compare
RS_RS20410 -2.8 -5.3 AraC family transcriptional regulator compare
RS_RS07130 -2.7 -7.1 phosphoenolpyruvate synthase compare
RS_RS11780 -2.7 -3.7 NAD+ synthase compare
RS_RS00130 -2.6 -6.1 methionine biosynthesis protein MetW compare
RS_RS10675 -2.6 -1.4 sugar-binding transcriptional regulator compare
RS_RS24615 -2.5 -7.8 glucose-6-phosphate dehydrogenase compare
RS_RS14885 -2.5 -2.6 shikimate kinase compare
RS_RS06120 -2.5 -3.0 FtsH protease activity modulator HflK compare
RS_RS12150 -2.5 -1.7 sulfate adenylyltransferase subunit 1 compare
RS_RS03305 -2.4 -0.9 type 4 prepilin peptidase 1 compare
RS_RS07210 -2.4 -0.9 ribbon-helix-helix protein, CopG family compare
RS_RS05680 -2.4 -0.9 threonylcarbamoyl-AMP synthase compare
RS_RS01735 -2.4 -1.5 S41 family peptidase compare
RS_RS12145 -2.4 -1.6 uroporphyrinogen-III C-methyltransferase compare
RS_RS11945 -2.4 -3.6 iron-sulfur cluster carrier protein ApbC compare
RS_RS19290 -2.3 -2.3 pirin family protein compare
RS_RS16090 -2.3 -0.9 hypothetical protein compare
RS_RS23550 -2.3 -0.8 MFS transporter compare
RS_RS01830 -2.3 -1.9 protoheme IX farnesyltransferase compare
RS_RS06870 -2.2 -3.4 lysophospholipid transporter LplT compare
RS_RS25645 -2.2 -1.7 hypothetical protein compare
RS_RS10215 -2.1 -0.8 urease accessory protein compare
RS_RS12835 -2.1 -0.8 TetR/AcrR family transcriptional regulator compare
RS_RS25285 -2.1 -0.8 hypothetical protein compare
RS_RS12170 -2.1 -1.4 nitrite/sulfite reductase compare
RS_RS00460 -2.1 -1.4 methylenetetrahydrofolate reductase [NAD(P)H] compare
RS_RS23150 -2.1 -0.7 hypothetical protein compare
RS_RS11645 -2.0 -2.3 heavy metal-responsive transcriptional regulator compare
RS_RS24985 -2.0 -1.0 hypothetical protein compare
RS_RS12160 -2.0 -1.0 phosphoadenylyl-sulfate reductase compare
RS_RS10435 -2.0 -2.3 DUF3106 domain-containing protein compare
RS_RS11805 -1.9 -1.2 NAD(P)-dependent oxidoreductase compare
RS_RS09675 -1.9 -1.4 hypothetical protein compare
RS_RS16755 -1.9 -1.3 ABC transporter ATP-binding protein compare
RS_RS12175 -1.9 -1.8 sulfite exporter TauE/SafE family protein compare
RS_RS18685 -1.9 -1.2 Cd(II)/Pb(II)-responsive transcriptional regulator compare
RS_RS09015 -1.9 -1.3 type 4 fimbrial biogenesis protein compare
RS_RS01705 -1.9 -0.8 PTS fructose transporter subunit IIA compare
RS_RS04510 -1.8 -0.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
RS_RS09175 -1.8 -1.2 cupin domain-containing protein compare
RS_RS10980 -1.8 -1.3 uracil phosphoribosyltransferase compare
RS_RS05240 -1.8 -1.1 PDZ domain-containing protein compare
RS_RS21650 -1.8 -0.6 gluconokinase compare
RS_RS12295 -1.8 -7.1 quinolinate synthase compare
RS_RS13455 -1.8 -1.2 DNA starvation/stationary phase protection protein compare
RS_RS16290 -1.8 -1.1 tRNA-Ala compare
RS_RS08190 -1.8 -0.6 DUF465 domain-containing protein compare
RS_RS24960 -1.8 -8.5 NAD(P)-dependent oxidoreductase compare
RS_RS10425 -1.8 -1.1 RNA polymerase sigma factor compare
RS_RS17205 -1.7 -4.5 cold-shock protein compare
RS_RS08205 -1.7 -3.4 RluA family pseudouridine synthase compare
RS_RS14570 -1.7 -2.5 glucan biosynthesis protein H compare
RS_RS18615 -1.7 -0.6 hypothetical protein compare
RS_RS23090 -1.7 -1.1 diguanylate cyclase compare
RS_RS03465 -1.6 -1.9 glycosyl transferase compare
RS_RS02615 -1.6 -0.6 hypothetical protein compare
RS_RS09620 -1.6 -0.8 XRE family transcriptional regulator compare
RS_RS24280 -1.6 -2.0 alpha/beta hydrolase compare
RS_RS25455 -1.6 -0.8 hypothetical protein compare
RS_RS09830 -1.6 -2.0 fumarate hydratase compare
RS_RS06745 -1.6 -6.1 sulfate ABC transporter permease subunit CysT compare
RS_RS22175 -1.6 -0.6 Hpt domain-containing protein compare
RS_RS09545 -1.6 -0.6 (2Fe-2S)-binding protein compare
RS_RS03360 -1.6 -0.6 response regulator compare
RS_RS14690 -1.6 -1.1 PDZ domain-containing protein compare
RS_RS07325 -1.5 -1.6 hypothetical protein compare
RS_RS09075 -1.5 -1.4 alpha-ketoacid dehydrogenase subunit beta compare
RS_RS08235 -1.5 -3.4 polyhydroxyalkanoate synthesis repressor PhaR compare
RS_RS19870 -1.5 -0.5 site-specific DNA-methyltransferase compare
RS_RS05035 -1.5 -1.5 sugar ABC transporter substrate-binding protein compare
RS_RS05225 -1.5 -2.2 RNA polymerase sigma factor RpoE compare
RS_RS13410 -1.5 -0.8 type IV pilus modification protein PilV compare
RS_RS10040 -1.5 -1.0 malate dehydrogenase compare
RS_RS08890 -1.5 -0.5 bifunctional nicotinamidase/pyrazinamidase compare
RS_RS00450 -1.5 -2.5 5-formyltetrahydrofolate cyclo-ligase compare
RS_RS07080 -1.5 -0.8 RIP metalloprotease RseP compare
RS_RS06790 -1.5 -0.7 ribonuclease E inhibitor RraA compare
RS_RS21360 -1.5 -0.5 hypothetical protein compare
RS_RS07640 -1.5 -0.7 DUF4149 domain-containing protein compare
RS_RS06710 -1.4 -1.5 aliphatic sulfonate ABC transporter substrate-binding protein compare
RS_RS02795 -1.4 -2.3 pilin compare
RS_RS00465 -1.4 -2.4 phage holin family protein compare
RS_RS02765 -1.4 -1.3 regulatory protein RecX compare
RS_RS01515 -1.4 -0.9 ferritin compare
RS_RS22040 -1.4 -2.5 protein-tyrosine-phosphatase compare
RS_RS09460 -1.4 -4.1 formyltetrahydrofolate deformylase compare
RS_RS13320 -1.4 -2.4 3-deoxy-7-phosphoheptulonate synthase compare
RS_RS26045 -1.4 -0.8 hypothetical protein compare
RS_RS10035 -1.4 -0.5 GntR family transcriptional regulator compare
RS_RS03100 -1.3 -0.5 recombination-associated protein RdgC compare
RS_RS16730 -1.3 -0.5 hypothetical protein compare
RS_RS05135 -1.3 -1.1 molybdopterin molybdenumtransferase MoeA compare
RS_RS14405 -1.3 -0.9 murein transglycosylase compare
RS_RS07405 -1.3 -0.9 LysR family transcriptional regulator compare
RS_RS01075 -1.3 -2.4 aldo/keto reductase compare
RS_RS23885 -1.3 -1.3 protein phosphatase CheZ compare
RS_RS04405 -1.3 -0.8 hypothetical protein compare
RS_RS11790 -1.3 -0.9 hypothetical protein compare
RS_RS18680 -1.3 -0.9 heavy metal translocating P-type ATPase compare
RS_RS09975 -1.3 -0.9 tRNA pseudouridine(38-40) synthase TruA compare
RS_RS07735 -1.3 -0.5 sulfite exporter TauE/SafE family protein compare
RS_RS16155 -1.3 -1.0 type II toxin-antitoxin system ParD family antitoxin compare
RS_RS22870 -1.3 -3.8 permease compare
RS_RS06280 -1.3 -1.7 polysaccharide deacetylase family protein compare
RS_RS13670 -1.3 -4.2 NAD(P) transhydrogenase subunit alpha compare
RS_RS17575 -1.3 -3.9 transcriptional regulator compare
RS_RS07930 -1.3 -2.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
RS_RS06880 -1.3 -0.7 DNA repair protein RadA compare
RS_RS21975 -1.3 -5.5 DegT/DnrJ/EryC1/StrS aminotransferase family protein compare
RS_RS14945 -1.3 -1.8 membrane protein compare
RS_RS25370 -1.3 -0.6 hypothetical protein compare
RS_RS15600 -1.3 -3.8 type II secretion system protein GspG compare
RS_RS03500 -1.3 -2.5 sulfurtransferase compare
RS_RS03000 -1.3 -1.5 hypothetical protein compare
RS_RS04485 -1.2 -1.8 DUF2059 domain-containing protein compare
RS_RS11200 -1.2 -1.9 TIGR00730 family Rossman fold protein compare
RS_RS02725 -1.2 -3.0 FAD-dependent monooxygenase compare
RS_RS16775 -1.2 -3.6 copper-translocating P-type ATPase compare
RS_RS08255 -1.2 -0.7 hypothetical protein compare
RS_RS18020 -1.2 -1.3 SRPBCC domain-containing protein compare
RS_RS14840 -1.2 -4.7 ABC transporter permease compare
RS_RS09255 -1.2 -1.1 cyclase compare
RS_RS11230 -1.2 -1.1 UTP--glucose-1-phosphate uridylyltransferase compare
RS_RS04950 -1.2 -1.9 cytochrome c compare
RS_RS12600 -1.2 -0.8 hypothetical protein compare
RS_RS08335 -1.2 -2.8 AcrB/AcrD/AcrF family protein compare
RS_RS05570 -1.2 -1.8 TatD family deoxyribonuclease compare
RS_RS16505 -1.2 -2.6 glycine cleavage system protein H compare
RS_RS16195 -1.2 -0.7 hypothetical protein compare
RS_RS24160 -1.2 -1.0 hypothetical protein compare
RS_RS08650 -1.2 -1.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
RS_RS14050 -1.2 -2.7 inner membrane protein YpjD compare
RS_RS21545 -1.1 -1.7 hypothetical protein compare
RS_RS16355 -1.1 -1.0 YraN family protein compare
RS_RS11905 -1.1 -1.7 hypothetical protein compare
RS_RS05130 -1.1 -0.5 hypothetical protein compare
RS_RS13515 -1.1 -1.5 hypothetical protein compare
RS_RS01420 -1.1 -4.3 sensor histidine kinase compare
RS_RS12880 -1.1 -0.4 DNA-3-methyladenine glycosylase 2 family protein compare
RS_RS25030 -1.1 -1.3 RNA polymerase sigma factor compare
RS_RS07295 -1.1 -1.0 7-carboxy-7-deazaguanine synthase compare
RS_RS01850 -1.1 -3.1 OsmC family peroxiredoxin compare
RS_RS25550 -1.1 -1.9 hypothetical protein compare
RS_RS01435 -1.1 -3.7 DNA-binding response regulator compare
RS_RS01430 -1.1 -1.3 response regulator compare
RS_RS10075 -1.1 -4.1 DUF2863 domain-containing protein compare
RS_RS08985 -1.1 -0.8 hypothetical protein compare
RS_RS24620 -1.1 -0.8 phosphogluconate dehydratase compare
RS_RS15630 -1.1 -1.3 general secretion pathway protein GspM compare
RS_RS14670 -1.1 -3.1 cytochrome b compare
RS_RS15650 -1.1 -4.8 type II secretion system protein GspF compare
RS_RS08010 -1.1 -1.2 DUF1488 domain-containing protein compare
RS_RS25805 -1.1 -1.3 hypothetical protein compare
RS_RS08810 -1.1 -1.2 peptidyl-prolyl cis-trans isomerase compare
RS_RS26095 -1.1 -0.4 hypothetical protein compare
RS_RS06285 -1.1 -0.7 sterol desaturase family protein compare
RS_RS23755 -1.1 -3.6 AzlD family protein compare
RS_RS14290 -1.1 -4.5 long-chain-fatty-acid--CoA ligase compare
RS_RS18955 -1.1 -1.1 flagellar biosynthetic protein FliQ compare
RS_RS11305 -1.1 -1.6 3-oxoadipyl-CoA thiolase compare
RS_RS22020 -1.1 -4.1 EPS I polysaccharide export inner membrane protein EpsE compare
RS_RS06035 -1.0 -0.9 protein-L-isoaspartate O-methyltransferase compare


Specific Phenotypes

For 8 genes in this experiment

For carbon source D-Galactose in Ralstonia solanacearum GMI1000

For carbon source D-Galactose across organisms