Experiment set18S421 for Ralstonia solanacearum GMI1000

200 most important genes:

gene	name	fitness	t score	description
RS_RS24735		-4.7	-7.2	hypothetical protein
RS_RS06650		-4.6	-3.2	pyridoxal phosphate-dependent aminotransferase
RS_RS08265		-4.5	-3.1	phosphoserine phosphatase SerB
RS_RS15365		-3.8	-6.2	AGE family epimerase/isomerase
RS_RS04550		-3.8	-3.2	ADP-L-glycero-D-mannoheptose-6-epimerase
RS_RS02250		-3.7	-7.1	FAD-linked oxidase
RS_RS02605		-3.7	-3.6	D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase
RS_RS12180		-3.6	-6.5	CysB family HTH-type transcriptional regulator
RS_RS00135		-3.6	-5.5	homoserine O-acetyltransferase
RS_RS07885		-3.5	-1.5	chorismate synthase
RS_RS04490		-3.5	-5.2	3-phosphoserine/phosphohydroxythreonine aminotransferase
RS_RS04495		-3.4	-5.2	prephenate dehydratase
RS_RS14865		-3.2	-4.9	transposase
RS_RS00555		-3.2	-5.3	phosphomethylpyrimidine synthase
RS_RS22805		-2.9	-1.2	hypothetical protein
RS_RS14570		-2.8	-1.9	glucan biosynthesis protein H
RS_RS14860		-2.8	-4.7	glutamate synthase subunit alpha
RS_RS25645		-2.7	-1.8	hypothetical protein
RS_RS02830		-2.7	-3.1	lipopolysaccharide heptosyltransferase II
RS_RS25455		-2.6	-1.1	hypothetical protein
RS_RS00930		-2.5	-1.1	conjugal transfer protein TraR
RS_RS18380		-2.5	-6.2	sensor domain-containing diguanylate cyclase
RS_RS13410		-2.4	-1.0	type IV pilus modification protein PilV
RS_RS12155		-2.4	-2.8	sulfate adenylyltransferase subunit CysD
RS_RS12295		-2.4	-4.5	quinolinate synthase
RS_RS14840		-2.3	-5.3	ABC transporter permease
RS_RS09835		-2.3	-3.1	glutamate racemase
RS_RS18020		-2.1	-2.0	SRPBCC domain-containing protein
RS_RS10430		-2.1	-1.9	DUF3619 domain-containing protein
RS_RS10675		-2.1	-1.3	sugar-binding transcriptional regulator
RS_RS01625		-2.1	-5.6	C4-dicarboxylate transporter 1	conserved
RS_RS11005		-2.0	-5.2	nicotinate-nucleotide adenylyltransferase
RS_RS05225		-2.0	-2.3	RNA polymerase sigma factor RpoE
RS_RS14885		-1.9	-1.7	shikimate kinase
RS_RS06760		-1.9	-1.3	CysB family HTH-type transcriptional regulator
RS_RS14430		-1.9	-7.7	anthranilate synthase component I
RS_RS09670		-1.9	-0.8	hypothetical protein
RS_RS07010		-1.9	-0.8	cell division protein FtsZ
RS_RS13335		-1.9	-1.8	ATP:cob(I)alamin adenosyltransferase
RS_RS16155		-1.9	-1.1	type II toxin-antitoxin system ParD family antitoxin
RS_RS13890		-1.9	-2.3	shikimate dehydrogenase
RS_RS19165		-1.8	-5.5	TonB-dependent receptor
RS_RS23550		-1.8	-0.8	MFS transporter
RS_RS24630		-1.8	-2.0	DUF3293 domain-containing protein
RS_RS09830		-1.8	-1.2	fumarate hydratase
RS_RS09825		-1.8	-1.2	membrane protein
RS_RS03455		-1.8	-1.2	glycosyltransferase family 2 protein
RS_RS01630		-1.8	-6.1	sensor histidine kinase	conserved
RS_RS01635		-1.8	-2.1	sigma-54-dependent Fis family transcriptional regulator
RS_RS15985		-1.8	-1.6	hypothetical protein
RS_RS20405		-1.7	-3.1	EamA/RhaT family transporter
RS_RS25685		-1.7	-2.0	hypothetical protein
RS_RS00665		-1.7	-12.7	lauroyl acyltransferase
RS_RS19690		-1.7	-0.7	Rrf2 family transcriptional regulator
RS_RS13845		-1.7	-4.7	NADP-dependent malic enzyme
RS_RS16090		-1.7	-0.7	hypothetical protein
RS_RS12860		-1.7	-1.4	N-acetyltransferase
RS_RS04505		-1.7	-2.9	prephenate dehydrogenase/arogenate dehydrogenase family protein
RS_RS11780		-1.7	-2.5	NAD+ synthase
RS_RS10990		-1.6	-3.9	YebC/PmpR family DNA-binding transcriptional regulator
RS_RS10435		-1.6	-2.1	DUF3106 domain-containing protein
RS_RS12835		-1.6	-0.7	TetR/AcrR family transcriptional regulator
RS_RS21285		-1.6	-0.7	type III secretion protein HrpB4
RS_RS06300		-1.6	-0.7	rhodanese-like domain-containing protein
RS_RS24985		-1.6	-1.0	hypothetical protein
RS_RS06745		-1.6	-5.1	sulfate ABC transporter permease subunit CysT
RS_RS03535		-1.6	-0.7	tRNA (guanosine(46)-N7)-methyltransferase TrmB
RS_RS12150		-1.5	-2.3	sulfate adenylyltransferase subunit 1
RS_RS12290		-1.5	-1.5	nicotinate-nucleotide diphosphorylase (carboxylating)
RS_RS16270		-1.5	-0.8	hypothetical protein
RS_RS21155		-1.5	-2.1	leucine-rich repeat domain-containing protein
RS_RS23150		-1.5	-0.6	hypothetical protein
RS_RS18335		-1.5	-4.1	peroxiredoxin
RS_RS01735		-1.5	-1.0	S41 family peptidase
RS_RS02205		-1.5	-1.9	peptidase C39
RS_RS05435		-1.4	-0.9	LysR family transcriptional regulator
RS_RS19160		-1.4	-2.8	RNA polymerase sigma factor
RS_RS02430		-1.4	-3.4	OsmC family protein
RS_RS14830		-1.4	-10.1	ABC transporter
RS_RS15630		-1.4	-2.1	general secretion pathway protein GspM
RS_RS12830		-1.4	-5.6	membrane protein
RS_RS19495		-1.4	-0.7	DUF3005 domain-containing protein
RS_RS12875		-1.3	-0.6	DNA oxidative demethylase AlkB
RS_RS12145		-1.3	-1.3	uroporphyrinogen-III C-methyltransferase
RS_RS02865		-1.3	-1.6	pyruvate kinase
RS_RS13280		-1.3	-1.7	hypothetical protein
RS_RS03500		-1.3	-2.3	sulfurtransferase
RS_RS08335		-1.3	-1.9	AcrB/AcrD/AcrF family protein
RS_RS10075		-1.3	-3.7	DUF2863 domain-containing protein
RS_RS21650		-1.3	-0.5	gluconokinase
RS_RS10875		-1.3	-2.0	DUF979 domain-containing protein
RS_RS04510		-1.2	-0.7	3-phosphoshikimate 1-carboxyvinyltransferase
RS_RS14825		-1.2	-9.9	hypothetical protein
RS_RS03365		-1.2	-1.2	response regulator
RS_RS02825		-1.2	-3.8	hypothetical protein
RS_RS14845		-1.2	-7.8	ABC transporter ATP-binding protein
RS_RS07325		-1.2	-1.1	hypothetical protein
RS_RS08190		-1.2	-0.5	DUF465 domain-containing protein
RS_RS11645		-1.2	-1.4	heavy metal-responsive transcriptional regulator
RS_RS26040		-1.2	-1.8	hypothetical protein
RS_RS02975		-1.2	-0.9	hypothetical protein
RS_RS07385		-1.2	-3.9	xanthine dehydrogenase family protein subunit M
RS_RS07295		-1.2	-1.1	7-carboxy-7-deazaguanine synthase
RS_RS14945		-1.2	-2.8	membrane protein
RS_RS14050		-1.2	-2.1	inner membrane protein YpjD
RS_RS09620		-1.2	-0.6	XRE family transcriptional regulator
RS_RS00460		-1.2	-0.8	methylenetetrahydrofolate reductase [NAD(P)H]
RS_RS14835		-1.2	-8.5	outer membrane lipid asymmetry maintenance protein MlaD
RS_RS01825		-1.1	-2.4	heme A synthase
RS_RS10440		-1.1	-0.5	RDD family protein
RS_RS12170		-1.1	-0.8	nitrite/sulfite reductase
RS_RS02305		-1.1	-1.5	DUF502 domain-containing protein
RS_RS15185		-1.1	-2.6	DUF1175 domain-containing protein
RS_RS21195		-1.1	-4.4	FecR family protein
RS_RS06060		-1.1	-1.8	BAX inhibitor (BI)-1/YccA family protein
RS_RS12795		-1.1	-1.6	hypothetical protein
RS_RS09080		-1.1	-0.5	2-oxo acid dehydrogenase subunit E2
RS_RS13320		-1.1	-0.8	3-deoxy-7-phosphoheptulonate synthase
RS_RS03465		-1.1	-1.1	glycosyl transferase
RS_RS18615		-1.1	-0.5	hypothetical protein
RS_RS01750		-1.1	-1.1	glutaredoxin 3
RS_RS03420		-1.1	-1.5	1-acyl-sn-glycerol-3-phosphate acyltransferase
RS_RS06870		-1.1	-2.0	lysophospholipid transporter LplT
RS_RS21140		-1.1	-0.6	methyl-accepting chemotaxis protein
RS_RS12470		-1.1	-1.1	hypothetical protein
RS_RS01850		-1.1	-2.7	OsmC family peroxiredoxin
RS_RS02615		-1.1	-0.4	hypothetical protein
RS_RS10895		-1.1	-2.7	hypothetical protein
RS_RS23385		-1.1	-0.4	prepilin-type N-terminal cleavage/methylation domain-containing protein
RS_RS25580		-1.1	-1.2	DUF2321 domain-containing protein
RS_RS25785		-1.1	-1.8	phenylacetic acid degradation protein
RS_RS15805		-1.1	-1.2	hypothetical protein
RS_RS04410		-1.0	-1.4	DUF1484 domain-containing protein
RS_RS11035		-1.0	-1.1	alkylhydroperoxidase
RS_RS20230		-1.0	-1.8	methylmalonate-semialdehyde dehydrogenase (CoA acylating)
RS_RS06505		-1.0	-0.6	enoyl-CoA hydratase/isomerase family protein
RS_RS05035		-1.0	-1.2	sugar ABC transporter substrate-binding protein
RS_RS13600		-1.0	-1.1	polyisoprenoid-binding protein
RS_RS02170		-1.0	-0.6	hypothetical protein
RS_RS09405		-1.0	-0.7	DUF934 domain-containing protein
RS_RS22175		-1.0	-0.4	Hpt domain-containing protein
RS_RS12580		-1.0	-1.0	hypothetical protein
RS_RS02630		-1.0	-1.6	HlyC/CorC family transporter
RS_RS25805		-1.0	-1.0	hypothetical protein
RS_RS06790		-1.0	-0.6	ribonuclease E inhibitor RraA
RS_RS03335		-1.0	-1.7	membrane protein
RS_RS21250		-1.0	-0.9	YscQ/HrcQ family type III secretion apparatus protein
RS_RS26370		-1.0	-1.4	hypothetical protein
RS_RS18685		-1.0	-0.7	Cd(II)/Pb(II)-responsive transcriptional regulator
RS_RS13955		-1.0	-0.8	2-Cys peroxiredoxin
RS_RS09370		-1.0	-0.8	DUF1794 domain-containing protein
RS_RS19870		-1.0	-0.4	site-specific DNA-methyltransferase
RS_RS13225		-1.0	-1.1	hypothetical protein
RS_RS07080		-1.0	-0.6	RIP metalloprotease RseP
RS_RS09145		-1.0	-2.6	hypothetical protein
RS_RS12465		-1.0	-0.9	hypothetical protein
RS_RS07640		-1.0	-0.6	DUF4149 domain-containing protein
RS_RS12015		-1.0	-1.9	threonine-phosphate decarboxylase
RS_RS05240		-1.0	-0.6	PDZ domain-containing protein
RS_RS21860		-1.0	-1.4	LuxR family transcriptional regulator
RS_RS07405		-1.0	-0.8	LysR family transcriptional regulator
RS_RS16750		-1.0	-0.9	ABC transporter ATP-binding protein
RS_RS02725		-1.0	-2.0	FAD-dependent monooxygenase
RS_RS13455		-1.0	-0.6	DNA starvation/stationary phase protection protein
RS_RS12215		-0.9	-4.1	NAD-dependent dehydratase
RS_RS17900		-0.9	-1.4	hypothetical protein
RS_RS02220		-0.9	-2.0	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF
RS_RS03390		-0.9	-1.2	16S rRNA pseudouridine(516) synthase
RS_RS24445		-0.9	-3.5	SulP family inorganic anion transporter
RS_RS11825		-0.9	-4.7	heme biosynthesis protein HemY
RS_RS21115		-0.9	-1.7	NUDIX domain-containing protein
RS_RS17290		-0.9	-1.4	hypothetical protein
RS_RS08590		-0.9	-0.9	hypothetical protein
RS_RS16755		-0.9	-0.6	ABC transporter ATP-binding protein
RS_RS03940		-0.9	-0.6	FKBP-type peptidyl-prolyl cis-trans isomerase
RS_RS02840		-0.9	-3.3	branched-chain amino acid transaminase
RS_RS26500		-0.9	-0.6	hypothetical protein
RS_RS06680		-0.9	-0.9	molybdopterin synthase catalytic subunit
RS_RS04485		-0.9	-1.4	DUF2059 domain-containing protein
RS_RS18815		-0.9	-0.8	flagellar basal-body rod protein FlgF
RS_RS12045		-0.9	-1.8	iron ABC transporter permease
RS_RS08890		-0.9	-0.4	bifunctional nicotinamidase/pyrazinamidase
RS_RS25820		-0.9	-1.1	hypothetical protein
RS_RS14355		-0.9	-1.4	amidohydrolase
RS_RS22715		-0.9	-2.0	DUF1272 domain-containing protein
RS_RS07570		-0.9	-1.4	DUF2892 domain-containing protein
RS_RS02770		-0.9	-1.2	DUF2889 domain-containing protein
RS_RS02070		-0.9	-2.0	LysE family translocator
RS_RS03895		-0.9	-1.4	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
RS_RS20945		-0.9	-2.5	XRE family transcriptional regulator
RS_RS25615		-0.9	-1.1	hypothetical protein
RS_RS00465		-0.9	-2.1	phage holin family protein
RS_RS22710		-0.9	-3.0	AraC family transcriptional regulator
RS_RS20965		-0.9	-2.2	Crp/Fnr family transcriptional regulator
RS_RS11945		-0.9	-0.6	iron-sulfur cluster carrier protein ApbC
RS_RS24405		-0.9	-0.8	DUF1059 domain-containing protein
RS_RS22410		-0.9	-3.0	helix-turn-helix transcriptional regulator
RS_RS06880		-0.9	-0.5	DNA repair protein RadA
RS_RS25610		-0.9	-1.2	isochorismatase
RS_RS10095		-0.9	-1.6	peroxide stress protein YaaA

Specific Phenotypes

For 2 genes in this experiment

For carbon source Sodium succinate dibasic hexahydrate in Ralstonia solanacearum GMI1000

For carbon source Sodium succinate dibasic hexahydrate across organisms