Experiment set18S413 for Ralstonia solanacearum GMI1000

Compare to:

D-Glucose carbon source

200 most important genes:

  gene name fitness t score description  
RS_RS08265 -6.5 -2.9 phosphoserine phosphatase SerB compare
RS_RS02250 -6.0 -4.2 FAD-linked oxidase compare
RS_RS06650 -5.3 -3.2 pyridoxal phosphate-dependent aminotransferase compare
RS_RS22870 -4.9 -2.6 permease compare
RS_RS04495 -4.5 -5.4 prephenate dehydratase compare
RS_RS14885 -4.5 -1.9 shikimate kinase compare
RS_RS11840 -4.4 -4.3 phosphoenolpyruvate carboxylase compare
RS_RS14865 -4.4 -2.2 transposase compare
RS_RS24960 -4.2 -6.0 NAD(P)-dependent oxidoreductase compare
RS_RS07885 -4.2 -1.5 chorismate synthase compare
RS_RS04490 -4.0 -3.9 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
RS_RS09735 -4.0 -1.0 membrane protein compare
RS_RS12180 -3.9 -6.2 CysB family HTH-type transcriptional regulator compare
RS_RS01525 -3.9 -1.0 SPOR domain-containing protein compare
RS_RS24945 -3.9 -9.0 D-xylose ABC transporter substrate-binding protein conserved
RS_RS04510 -3.8 -1.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
RS_RS00555 -3.8 -5.1 phosphomethylpyrimidine synthase compare
RS_RS00135 -3.7 -5.1 homoserine O-acetyltransferase compare
RS_RS09740 -3.6 -0.9 tail protein X compare
RS_RS14455 -3.6 -1.6 CYTH domain-containing protein compare
RS_RS12155 -3.6 -2.2 sulfate adenylyltransferase subunit CysD compare
RS_RS10780 -3.5 -1.5 hypothetical protein compare
RS_RS24950 -3.5 -9.7 D-xylose ABC transporter ATP-binding protein conserved
RS_RS24735 -3.4 -4.7 hypothetical protein compare
RS_RS02185 -3.4 -1.4 gluconate kinase compare
RS_RS15470 -3.4 -1.2 hypothetical protein compare
RS_RS14860 -3.3 -9.7 glutamate synthase subunit alpha compare
RS_RS00130 -3.3 -6.5 methionine biosynthesis protein MetW compare
RS_RS13890 -3.2 -6.8 shikimate dehydrogenase compare
RS_RS15365 -3.2 -3.4 AGE family epimerase/isomerase compare
RS_RS14430 -3.2 -3.1 anthranilate synthase component I compare
RS_RS04550 -3.1 -4.3 ADP-L-glycero-D-mannoheptose-6-epimerase compare
RS_RS19520 -3.1 -0.8 TolC family protein compare
RS_RS24940 -3.1 -9.3 porin compare
RS_RS06730 -3.1 -0.8 transporter compare
RS_RS23925 -3.1 -0.8 response regulator compare
RS_RS08960 -3.0 -0.8 GNAT family N-acetyltransferase compare
RS_RS01735 -3.0 -1.3 S41 family peptidase compare
RS_RS08220 -3.0 -4.1 class I poly(R)-hydroxyalkanoic acid synthase compare
RS_RS10045 -3.0 -0.8 CoA ester lyase compare
RS_RS08050 -3.0 -11.2 PAS domain-containing sensor histidine kinase compare
RS_RS14005 -3.0 -2.1 Lrp/AsnC family transcriptional regulator compare
RS_RS24955 -3.0 -2.2 sugar ABC transporter permease compare
RS_RS14195 -2.9 -1.3 peroxiredoxin compare
RS_RS26075 -2.9 -0.7 hypothetical protein compare
RS_RS05760 -2.8 -1.4 methyl-accepting chemotaxis protein compare
RS_RS00055 -2.8 -1.9 TetR family transcriptional regulator compare
RS_RS07985 -2.8 -1.4 aldose 1-epimerase compare
RS_RS07450 -2.8 -1.2 hypothetical protein compare
RS_RS08545 -2.8 -1.4 phage tail protein compare
RS_RS13400 -2.8 -0.7 pilus assembly protein compare
RS_RS00450 -2.7 -3.6 5-formyltetrahydrofolate cyclo-ligase compare
RS_RS10435 -2.7 -3.3 DUF3106 domain-containing protein compare
RS_RS02605 -2.7 -3.1 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase compare
RS_RS09675 -2.7 -1.0 hypothetical protein compare
RS_RS12150 -2.7 -2.6 sulfate adenylyltransferase subunit 1 compare
RS_RS16775 -2.7 -2.3 copper-translocating P-type ATPase compare
RS_RS08810 -2.7 -2.5 peptidyl-prolyl cis-trans isomerase compare
RS_RS03465 -2.7 -1.8 glycosyl transferase compare
RS_RS25445 -2.6 -0.9 C-5 sterol desaturase compare
RS_RS11300 -2.6 -0.9 3-carboxy-cis,cis-muconate cycloisomerase compare
RS_RS12465 -2.6 -1.1 hypothetical protein compare
RS_RS10000 -2.6 -0.9 3-isopropylmalate dehydratase large subunit compare
RS_RS10430 -2.6 -2.7 DUF3619 domain-containing protein compare
RS_RS06890 -2.6 -0.6 DUF523 domain-containing protein compare
RS_RS10375 -2.5 -1.1 polyribonucleotide nucleotidyltransferase compare
RS_RS10035 -2.5 -0.6 GntR family transcriptional regulator compare
RS_RS11945 -2.5 -1.6 iron-sulfur cluster carrier protein ApbC compare
RS_RS13050 -2.5 -0.6 DUF2840 domain-containing protein compare
RS_RS24615 -2.5 -2.4 glucose-6-phosphate dehydrogenase compare
RS_RS01400 -2.5 -2.9 thiol:disulfide interchange protein DsbA/DsbL compare
RS_RS19830 -2.5 -1.4 transcriptional regulator compare
RS_RS08985 -2.4 -0.6 hypothetical protein compare
RS_RS00800 -2.4 -0.9 TetR/AcrR family transcriptional regulator compare
RS_RS05130 -2.4 -0.9 hypothetical protein compare
RS_RS11305 -2.4 -1.1 3-oxoadipyl-CoA thiolase compare
RS_RS09435 -2.4 -1.5 AlpA family phage regulatory protein compare
RS_RS07930 -2.4 -4.6 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
RS_RS08230 -2.4 -5.0 beta-ketoacyl-ACP reductase compare
RS_RS19535 -2.4 -0.6 HIT family protein compare
RS_RS09090 -2.4 -1.0 GALA protein compare
RS_RS03455 -2.3 -1.7 glycosyltransferase family 2 protein compare
RS_RS14905 -2.3 -1.2 ferrous iron transporter B compare
RS_RS11790 -2.3 -1.8 hypothetical protein compare
RS_RS19380 -2.3 -1.0 hypothetical protein compare
RS_RS09080 -2.3 -0.6 2-oxo acid dehydrogenase subunit E2 compare
RS_RS06285 -2.3 -1.4 sterol desaturase family protein compare
RS_RS11130 -2.3 -0.6 GatB/YqeY domain-containing protein compare
RS_RS12880 -2.3 -0.6 DNA-3-methyladenine glycosylase 2 family protein compare
RS_RS08205 -2.3 -1.3 RluA family pseudouridine synthase compare
RS_RS17220 -2.3 -0.8 DNA-binding protein compare
RS_RS22335 -2.3 -0.8 DUF3613 domain-containing protein compare
RS_RS11860 -2.3 -1.0 membrane protein compare
RS_RS14690 -2.3 -1.3 PDZ domain-containing protein compare
RS_RS06280 -2.2 -1.5 polysaccharide deacetylase family protein compare
RS_RS14140 -2.2 -1.2 prepilin peptidase compare
RS_RS13320 -2.2 -2.6 3-deoxy-7-phosphoheptulonate synthase compare
RS_RS11495 -2.2 -1.3 lytic transglycosylase compare
RS_RS13110 -2.2 -3.5 hypothetical protein compare
RS_RS00460 -2.2 -1.5 methylenetetrahydrofolate reductase [NAD(P)H] compare
RS_RS10445 -2.2 -1.0 permease compare
RS_RS02240 -2.2 -1.1 membrane protein compare
RS_RS06035 -2.2 -1.3 protein-L-isoaspartate O-methyltransferase compare
RS_RS06930 -2.2 -1.2 glutathione ABC transporter permease GsiD compare
RS_RS08890 -2.2 -0.5 bifunctional nicotinamidase/pyrazinamidase compare
RS_RS02515 -2.2 -0.9 tRNA dihydrouridine synthase DusB compare
RS_RS02650 -2.2 -0.8 hypothetical protein compare
RS_RS08165 -2.1 -0.9 hypothetical protein compare
RS_RS13455 -2.1 -1.4 DNA starvation/stationary phase protection protein compare
RS_RS06870 -2.1 -4.4 lysophospholipid transporter LplT compare
RS_RS01620 -2.1 -0.8 ferredoxin compare
RS_RS03730 -2.1 -1.2 hypothetical protein compare
RS_RS19150 -2.1 -0.5 transcriptional regulator compare
RS_RS25975 -2.1 -0.7 hypothetical protein compare
RS_RS06790 -2.1 -0.5 ribonuclease E inhibitor RraA compare
RS_RS08045 -2.1 -1.4 DNA-binding response regulator compare
RS_RS14445 -2.1 -0.9 Anthranilate phosphoribosyltransferase 1 compare
RS_RS07080 -2.1 -0.7 RIP metalloprotease RseP compare
RS_RS13260 -2.1 -0.9 histidine utilization repressor compare
RS_RS24605 -2.1 -5.8 glucokinase compare
RS_RS03900 -2.1 -3.7 catalase/peroxidase HPI compare
RS_RS02985 -2.1 -0.7 hypothetical protein compare
RS_RS08190 -2.1 -0.5 DUF465 domain-containing protein compare
RS_RS06355 -2.0 -1.0 glycerophosphodiester phosphodiesterase compare
RS_RS12580 -2.0 -1.7 hypothetical protein compare
RS_RS04505 -2.0 -1.9 prephenate dehydrogenase/arogenate dehydrogenase family protein compare
RS_RS22860 -2.0 -2.0 D-aminoacylase compare
RS_RS06990 -2.0 -6.1 succinyldiaminopimelate transaminase compare
RS_RS26540 -2.0 -1.2 hypothetical protein compare
RS_RS14035 -2.0 -1.1 sigma-54-dependent Fis family transcriptional regulator compare
RS_RS11035 -2.0 -0.7 alkylhydroperoxidase compare
RS_RS03790 -2.0 -1.2 membrane protein compare
RS_RS05770 -2.0 -0.5 GMP synthase compare
RS_RS03405 -2.0 -1.0 bifunctional pyrimidine operon transcriptional regulator/uracil phosphoribosyltransferase compare
RS_RS08650 -2.0 -1.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
RS_RS12145 -2.0 -1.3 uroporphyrinogen-III C-methyltransferase compare
RS_RS06760 -2.0 -1.0 CysB family HTH-type transcriptional regulator compare
RS_RS25500 -2.0 -0.5 hypothetical protein compare
RS_RS09825 -2.0 -1.3 membrane protein compare
RS_RS20120 -2.0 -0.7 ferredoxin protein compare
RS_RS25635 -2.0 -3.2 hypothetical protein compare
RS_RS16420 -2.0 -1.0 DUF1949 domain-containing protein compare
RS_RS01515 -1.9 -1.2 ferritin compare
RS_RS00245 -1.9 -13.7 6-phosphogluconolactonase conserved
RS_RS06685 -1.9 -0.7 fluoride efflux transporter CrcB compare
RS_RS12635 -1.9 -1.0 oxidoreductase compare
RS_RS09460 -1.9 -2.8 formyltetrahydrofolate deformylase compare
RS_RS22360 -1.9 -1.2 pilus assembly protein compare
RS_RS07010 -1.9 -0.5 cell division protein FtsZ compare
RS_RS07395 -1.9 -0.7 (2Fe-2S)-binding protein compare
RS_RS07130 -1.9 -6.9 phosphoenolpyruvate synthase compare
RS_RS05135 -1.9 -0.9 molybdopterin molybdenumtransferase MoeA compare
RS_RS08145 -1.9 -1.2 NUDIX domain-containing protein compare
RS_RS12160 -1.9 -0.9 phosphoadenylyl-sulfate reductase compare
RS_RS01040 -1.9 -0.7 transcriptional regulator compare
RS_RS03160 -1.8 -0.4 cytochrome c compare
RS_RS25755 -1.8 -1.0 hypothetical protein compare
RS_RS12170 -1.8 -2.5 nitrite/sulfite reductase compare
RS_RS22955 -1.8 -3.6 cytochrome d ubiquinol oxidase subunit II compare
RS_RS14900 -1.8 -0.8 type IV pilus biogenesis protein PilO compare
RS_RS00520 -1.8 -1.3 hypothetical protein compare
RS_RS07480 -1.8 -0.6 hypothetical protein compare
RS_RS20405 -1.8 -5.4 EamA/RhaT family transporter compare
RS_RS01635 -1.8 -1.2 sigma-54-dependent Fis family transcriptional regulator compare
RS_RS18160 -1.8 -0.6 hypothetical protein compare
RS_RS07990 -1.8 -0.7 hypothetical protein compare
RS_RS02020 -1.8 -1.2 RNA polymerase sigma-54 factor compare
RS_RS08800 -1.8 -2.2 peptidase C45 compare
RS_RS17115 -1.8 -1.7 hypothetical protein compare
RS_RS04740 -1.8 -0.4 hypothetical protein compare
RS_RS17175 -1.8 -0.4 DNA (cytosine-5-)-methyltransferase compare
RS_RS06745 -1.7 -3.4 sulfate ABC transporter permease subunit CysT compare
RS_RS10485 -1.7 -0.4 oxygen-binding protein (globin) compare
RS_RS01245 -1.7 -1.9 DUF1254 domain-containing protein compare
RS_RS10735 -1.7 -0.8 HAD family phosphatase compare
RS_RS01705 -1.7 -0.6 PTS fructose transporter subunit IIA compare
RS_RS25455 -1.7 -0.4 hypothetical protein compare
RS_RS10715 -1.7 -0.4 hypothetical protein compare
RS_RS14855 -1.7 -2.6 glutamate synthase subunit beta compare
RS_RS13410 -1.7 -0.4 type IV pilus modification protein PilV compare
RS_RS08975 -1.7 -2.4 hypothetical protein compare
RS_RS17975 -1.7 -3.5 cysteine desulfurase compare
RS_RS13705 -1.7 -2.4 class I SAM-dependent RNA methyltransferase compare
RS_RS22880 -1.7 -0.4 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
RS_RS07805 -1.7 -1.0 hypothetical protein compare
RS_RS14945 -1.7 -3.1 membrane protein compare
RS_RS11195 -1.7 -2.2 DNA polymerase I compare
RS_RS25610 -1.7 -0.6 isochorismatase compare
RS_RS02200 -1.7 -0.4 hypothetical protein compare
RS_RS02715 -1.7 -2.2 DNA-binding response regulator compare
RS_RS18680 -1.7 -1.0 heavy metal translocating P-type ATPase compare
RS_RS05600 -1.6 -1.0 alpha/beta hydrolase compare
RS_RS25095 -1.6 -0.4 membrane protein compare
RS_RS15770 -1.6 -1.6 MarR family transcriptional regulator compare
RS_RS26165 -1.6 -0.6 hypothetical protein compare
RS_RS06310 -1.6 -0.9 hypothetical protein compare
RS_RS03390 -1.6 -1.1 16S rRNA pseudouridine(516) synthase compare
RS_RS16950 -1.6 -0.6 potassium-transporting ATPase subunit B compare
RS_RS03935 -1.6 -2.6 tRNA-Cys compare
RS_RS12430 -1.6 -1.1 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source D-Glucose in Ralstonia solanacearum GMI1000

For carbon source D-Glucose across organisms