Experiment set18S397 for Ralstonia solanacearum GMI1000

Compare to:

D-Glucose carbon source

200 most important genes:

  gene name fitness t score description  
RS_RS06650 -6.7 -6.5 pyridoxal phosphate-dependent aminotransferase compare
RS_RS02250 -6.5 -7.7 FAD-linked oxidase compare
RS_RS11840 -6.2 -11.2 phosphoenolpyruvate carboxylase compare
RS_RS04495 -6.0 -7.1 prephenate dehydratase compare
RS_RS08265 -6.0 -3.5 phosphoserine phosphatase SerB compare
RS_RS02185 -5.9 -3.4 gluconate kinase compare
RS_RS00135 -5.5 -3.8 homoserine O-acetyltransferase compare
RS_RS04490 -5.5 -3.8 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
RS_RS24960 -5.5 -8.3 NAD(P)-dependent oxidoreductase compare
RS_RS04505 -5.3 -3.7 prephenate dehydrogenase/arogenate dehydrogenase family protein compare
RS_RS24735 -5.3 -3.7 hypothetical protein compare
RS_RS12155 -5.3 -3.6 sulfate adenylyltransferase subunit CysD compare
RS_RS07885 -5.2 -1.8 chorismate synthase compare
RS_RS12180 -4.9 -3.4 CysB family HTH-type transcriptional regulator compare
RS_RS22880 -4.8 -1.7 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
RS_RS14860 -4.8 -5.8 glutamate synthase subunit alpha compare
RS_RS14865 -4.6 -4.7 transposase compare
RS_RS00555 -4.6 -9.3 phosphomethylpyrimidine synthase compare
RS_RS24945 -4.4 -11.0 D-xylose ABC transporter substrate-binding protein conserved
RS_RS06760 -4.3 -2.9 CysB family HTH-type transcriptional regulator compare
RS_RS22870 -4.3 -2.6 permease compare
RS_RS24955 -4.3 -5.1 sugar ABC transporter permease compare
RS_RS24615 -4.2 -2.9 glucose-6-phosphate dehydrogenase compare
RS_RS08230 -4.1 -7.1 beta-ketoacyl-ACP reductase compare
RS_RS13890 -4.1 -6.7 shikimate dehydrogenase compare
RS_RS24950 -4.0 -7.7 D-xylose ABC transporter ATP-binding protein conserved
RS_RS14430 -3.8 -7.2 anthranilate synthase component I compare
RS_RS00130 -3.6 -7.6 methionine biosynthesis protein MetW compare
RS_RS20405 -3.6 -6.2 EamA/RhaT family transporter compare
RS_RS13455 -3.6 -2.4 DNA starvation/stationary phase protection protein compare
RS_RS00460 -3.5 -2.4 methylenetetrahydrofolate reductase [NAD(P)H] compare
RS_RS14885 -3.5 -2.0 shikimate kinase compare
RS_RS08220 -3.5 -5.8 class I poly(R)-hydroxyalkanoic acid synthase compare
RS_RS08045 -3.5 -2.4 DNA-binding response regulator compare
RS_RS06750 -3.3 -3.9 sulfate ABC transporter permease subunit CysW compare
RS_RS03505 -3.3 -3.9 protein-L-isoaspartate O-methyltransferase compare
RS_RS10040 -3.3 -2.0 malate dehydrogenase compare
RS_RS09735 -3.2 -1.1 membrane protein compare
RS_RS18825 -3.2 -1.9 flagellar L-ring protein FlgH compare
RS_RS11945 -3.2 -1.7 iron-sulfur cluster carrier protein ApbC compare
RS_RS06700 -3.2 -3.0 sulfate ABC transporter substrate-binding protein compare
RS_RS24940 -3.1 -14.0 porin compare
RS_RS10430 -3.1 -4.7 DUF3619 domain-containing protein compare
RS_RS04510 -2.9 -1.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
RS_RS07130 -2.9 -11.6 phosphoenolpyruvate synthase compare
RS_RS04550 -2.9 -6.3 ADP-L-glycero-D-mannoheptose-6-epimerase compare
RS_RS06880 -2.8 -1.0 DNA repair protein RadA compare
RS_RS11780 -2.7 -7.1 NAD+ synthase compare
RS_RS14570 -2.6 -1.8 glucan biosynthesis protein H compare
RS_RS10375 -2.6 -2.5 polyribonucleotide nucleotidyltransferase compare
RS_RS07325 -2.6 -1.4 hypothetical protein compare
RS_RS08050 -2.6 -6.6 PAS domain-containing sensor histidine kinase compare
RS_RS02605 -2.6 -4.1 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase compare
RS_RS22170 -2.5 -2.4 EamA/RhaT family transporter compare
RS_RS05770 -2.4 -0.8 GMP synthase compare
RS_RS02580 -2.4 -1.7 ribosomal RNA small subunit methyltransferase A compare
RS_RS10435 -2.4 -2.9 DUF3106 domain-containing protein compare
RS_RS12150 -2.4 -1.6 sulfate adenylyltransferase subunit 1 compare
RS_RS09435 -2.4 -2.5 AlpA family phage regulatory protein compare
RS_RS18685 -2.4 -1.3 Cd(II)/Pb(II)-responsive transcriptional regulator compare
RS_RS08330 -2.3 -2.2 efflux RND transporter periplasmic adaptor subunit compare
RS_RS12145 -2.3 -1.6 uroporphyrinogen-III C-methyltransferase compare
RS_RS15295 -2.3 -1.9 DeoR/GlpR transcriptional regulator compare
RS_RS06285 -2.2 -2.1 sterol desaturase family protein compare
RS_RS06990 -2.2 -6.2 succinyldiaminopimelate transaminase compare
RS_RS08440 -2.2 -1.8 hypothetical protein compare
RS_RS01645 -2.2 -1.0 O-acetyl-ADP-ribose deacetylase compare
RS_RS14690 -2.2 -1.5 PDZ domain-containing protein compare
RS_RS16730 -2.2 -0.7 hypothetical protein compare
RS_RS25480 -2.1 -0.7 hypothetical protein compare
RS_RS07930 -2.1 -2.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
RS_RS09545 -2.1 -1.2 (2Fe-2S)-binding protein compare
RS_RS12170 -2.1 -1.4 nitrite/sulfite reductase compare
RS_RS00245 -2.1 -14.0 6-phosphogluconolactonase conserved
RS_RS10715 -2.1 -0.7 hypothetical protein compare
RS_RS05080 -2.0 -0.7 Fe-S assembly protein IscX compare
RS_RS18830 -2.0 -0.9 flagellar P-ring protein FlgI compare
RS_RS09740 -2.0 -0.7 tail protein X compare
RS_RS08665 -2.0 -2.3 tRNA-Val compare
RS_RS00450 -2.0 -5.6 5-formyltetrahydrofolate cyclo-ligase compare
RS_RS01400 -2.0 -1.3 thiol:disulfide interchange protein DsbA/DsbL compare
RS_RS03160 -1.9 -0.6 cytochrome c compare
RS_RS12160 -1.9 -0.9 phosphoadenylyl-sulfate reductase compare
RS_RS04170 -1.9 -7.6 hypothetical protein compare
RS_RS07585 -1.9 -0.6 conjugal transfer protein TraR compare
RS_RS13345 -1.9 -0.6 LysR family transcriptional regulator compare
RS_RS10245 -1.9 -0.9 MaoC family dehydratase compare
RS_RS06445 -1.9 -1.3 23S rRNA pseudouridylate synthase B compare
RS_RS06300 -1.8 -0.6 rhodanese-like domain-containing protein compare
RS_RS14445 -1.8 -1.0 Anthranilate phosphoribosyltransferase 1 compare
RS_RS06745 -1.8 -5.5 sulfate ABC transporter permease subunit CysT compare
RS_RS10945 -1.8 -1.8 radical SAM protein compare
RS_RS02860 -1.8 -0.8 phosphoglycerate kinase compare
RS_RS08225 -1.8 -6.0 acetyl-CoA C-acetyltransferase compare
RS_RS02430 -1.8 -3.6 OsmC family protein compare
RS_RS13805 -1.7 -0.7 2-dehydro-3-deoxygalactonokinase compare
RS_RS10415 -1.7 -0.5 acetolactate synthase small subunit compare
RS_RS14805 -1.7 -0.6 BolA family transcriptional regulator compare
RS_RS01515 -1.7 -1.1 ferritin compare
RS_RS06870 -1.7 -5.2 lysophospholipid transporter LplT compare
RS_RS15435 -1.7 -2.2 hypothetical protein compare
RS_RS08465 -1.7 -0.5 HNH endonuclease compare
RS_RS14970 -1.6 -2.4 cytochrome c4 compare
RS_RS04470 -1.6 -0.8 glycine zipper 2TM domain-containing protein compare
RS_RS24605 -1.6 -5.8 glucokinase compare
RS_RS18335 -1.6 -5.3 peroxiredoxin compare
RS_RS08235 -1.6 -2.9 polyhydroxyalkanoate synthesis repressor PhaR compare
RS_RS21975 -1.6 -8.7 DegT/DnrJ/EryC1/StrS aminotransferase family protein compare
RS_RS14365 -1.6 -0.5 23S ribosomal RNA compare
RS_RS01980 -1.6 -4.0 GTPase compare
RS_RS00930 -1.6 -0.5 conjugal transfer protein TraR compare
RS_RS10990 -1.6 -0.7 YebC/PmpR family DNA-binding transcriptional regulator compare
RS_RS14840 -1.6 -4.8 ABC transporter permease compare
RS_RS00520 -1.6 -1.1 hypothetical protein compare
RS_RS22020 -1.5 -6.3 EPS I polysaccharide export inner membrane protein EpsE compare
RS_RS09270 -1.5 -0.7 NAD(P)-dependent oxidoreductase compare
RS_RS11325 -1.5 -0.6 hypothetical protein compare
RS_RS02195 -1.5 -1.4 hypothetical protein compare
RS_RS20360 -1.5 -8.6 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase compare
RS_RS06115 -1.5 -0.7 GTPase HflX compare
RS_RS13320 -1.5 -4.3 3-deoxy-7-phosphoheptulonate synthase compare
RS_RS19165 -1.5 -9.1 TonB-dependent receptor compare
RS_RS17220 -1.5 -1.0 DNA-binding protein compare
RS_RS15365 -1.5 -4.6 AGE family epimerase/isomerase compare
RS_RS22115 -1.5 -3.6 DNA-binding protein compare
RS_RS15855 -1.5 -0.8 hypothetical protein compare
RS_RS14615 -1.5 -0.7 RNA polymerase sigma factor compare
RS_RS14735 -1.5 -0.7 twin-arginine translocase subunit TatB compare
RS_RS09460 -1.5 -6.1 formyltetrahydrofolate deformylase compare
RS_RS00465 -1.5 -3.0 phage holin family protein compare
RS_RS10000 -1.4 -0.6 3-isopropylmalate dehydratase large subunit compare
RS_RS24510 -1.4 -3.3 hypothetical protein compare
RS_RS03495 -1.4 -1.6 channel protein TolC compare
RS_RS01360 -1.4 -1.0 carbonate dehydratase compare
RS_RS11790 -1.4 -0.6 hypothetical protein compare
RS_RS25095 -1.4 -0.5 membrane protein compare
RS_RS03365 -1.4 -4.8 response regulator compare
RS_RS05130 -1.4 -0.7 hypothetical protein compare
RS_RS11220 -1.4 -1.3 DNA-dependent helicase compare
RS_RS07560 -1.4 -0.8 universal stress protein compare
RS_RS06680 -1.4 -0.8 molybdopterin synthase catalytic subunit compare
RS_RS18760 -1.4 -5.9 DNA-binding protein compare
RS_RS25805 -1.4 -3.1 hypothetical protein compare
RS_RS10980 -1.4 -0.9 uracil phosphoribosyltransferase compare
RS_RS22435 -1.4 -4.5 UDP-glucose 4-epimerase GalE compare
RS_RS03190 -1.3 -1.0 DNA-binding response regulator compare
RS_RS21020 -1.3 -1.5 transcription regulator protein compare
RS_RS21400 -1.3 -0.4 2-keto-4-pentenoate hydratase compare
RS_RS21385 -1.3 -1.8 oxidoreductase compare
RS_RS05240 -1.3 -2.0 PDZ domain-containing protein compare
RS_RS01735 -1.3 -0.7 S41 family peptidase compare
RS_RS24690 -1.3 -2.0 LysR family transcriptional regulator compare
RS_RS09075 -1.3 -1.8 alpha-ketoacid dehydrogenase subunit beta compare
RS_RS24920 -1.3 -0.6 DUF1778 domain-containing protein compare
RS_RS23815 -1.3 -2.3 AraC family transcriptional regulator compare
RS_RS25985 -1.3 -1.3 hypothetical protein compare
RS_RS16165 -1.3 -1.6 hypothetical protein compare
RS_RS24705 -1.3 -2.8 amino acid ABC transporter permease compare
RS_RS10075 -1.3 -5.5 DUF2863 domain-containing protein compare
RS_RS02220 -1.3 -2.8 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF compare
RS_RS24160 -1.3 -0.6 hypothetical protein compare
RS_RS14855 -1.2 -1.0 glutamate synthase subunit beta compare
RS_RS10825 -1.2 -3.5 serine/threonine-protein phosphatase compare
RS_RS13355 -1.2 -1.5 glycolate oxidase subunit GlcE compare
RS_RS01995 -1.2 -1.4 RNase adaptor protein RapZ compare
RS_RS07590 -1.2 -2.9 DUF1488 domain-containing protein compare
RS_RS20365 -1.2 -5.0 LysR family transcriptional regulator compare
RS_RS08335 -1.2 -3.3 AcrB/AcrD/AcrF family protein compare
RS_RS03370 -1.2 -2.4 chemotaxis protein CheW compare
RS_RS19130 -1.2 -1.0 hypothetical protein compare
RS_RS02780 -1.2 -0.7 succinate--CoA ligase subunit alpha compare
RS_RS25085 -1.2 -0.4 hypothetical protein compare
RS_RS01705 -1.2 -0.5 PTS fructose transporter subunit IIA compare
RS_RS13210 -1.2 -2.7 nucleoside diphosphate kinase regulator compare
RS_RS24035 -1.2 -0.5 hypothetical protein compare
RS_RS03455 -1.2 -1.4 glycosyltransferase family 2 protein compare
RS_RS25880 -1.2 -0.7 hypothetical protein compare
RS_RS12295 -1.2 -5.3 quinolinate synthase compare
RS_RS10440 -1.2 -0.4 RDD family protein compare
RS_RS03240 -1.2 -1.1 peptidase M48 compare
RS_RS12465 -1.2 -1.1 hypothetical protein compare
RS_RS21980 -1.1 -5.0 acetyltransferase compare
RS_RS01440 -1.1 -0.4 hypothetical protein compare
RS_RS22410 -1.1 -5.0 helix-turn-helix transcriptional regulator compare
RS_RS17330 -1.1 -1.0 DNA-binding protein compare
RS_RS00175 -1.1 -0.7 anti-sigma factor compare
RS_RS01830 -1.1 -1.5 protoheme IX farnesyltransferase compare
RS_RS01305 -1.1 -6.5 biotin synthase compare
RS_RS07080 -1.1 -1.2 RIP metalloprotease RseP compare
RS_RS09755 -1.1 -3.9 phage major capsid protein, P2 family compare
RS_RS11870 -1.1 -1.6 RNA 2',3'-cyclic phosphodiesterase compare
RS_RS01435 -1.1 -3.6 DNA-binding response regulator compare
RS_RS19010 -1.1 -0.6 flagellar protein FliT compare
RS_RS18380 -1.1 -2.2 sensor domain-containing diguanylate cyclase compare
RS_RS25365 -1.1 -0.3 DNA cytosine methyltransferase compare
RS_RS02545 -1.1 -4.6 nucleotidyltransferase family protein compare
RS_RS25670 -1.1 -2.5 DUF2778 domain-containing protein compare
RS_RS07830 -1.1 -1.2 hypothetical protein compare
RS_RS17575 -1.1 -2.0 transcriptional regulator compare
RS_RS06040 -1.1 -1.8 LysM peptidoglycan-binding domain-containing protein compare


Specific Phenotypes

For 6 genes in this experiment

For carbon source D-Glucose in Ralstonia solanacearum GMI1000

For carbon source D-Glucose across organisms