Experiment set18S394 for Ralstonia solanacearum GMI1000

Compare to:

Sucrose carbon source

200 most important genes:

  gene name fitness t score description  
RS_RS06650 -6.3 -4.3 pyridoxal phosphate-dependent aminotransferase compare
RS_RS02250 -5.9 -5.7 FAD-linked oxidase compare
RS_RS11840 -5.8 -6.9 phosphoenolpyruvate carboxylase compare
RS_RS07130 -5.6 -5.5 phosphoenolpyruvate synthase compare
RS_RS04495 -5.1 -5.0 prephenate dehydratase compare
RS_RS23345 -5.0 -4.8 fructosidase compare
RS_RS08265 -4.8 -3.3 phosphoserine phosphatase SerB compare
RS_RS04490 -4.5 -3.1 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
RS_RS07885 -4.4 -1.8 chorismate synthase compare
RS_RS24735 -4.3 -3.0 hypothetical protein compare
RS_RS00135 -4.3 -5.9 homoserine O-acetyltransferase compare
RS_RS14865 -4.3 -3.0 transposase compare
RS_RS12155 -4.3 -2.9 sulfate adenylyltransferase subunit CysD compare
RS_RS00130 -4.2 -2.9 methionine biosynthesis protein MetW compare
RS_RS14860 -4.0 -2.8 glutamate synthase subunit alpha compare
RS_RS20405 -4.0 -4.8 EamA/RhaT family transporter compare
RS_RS12180 -3.9 -2.7 CysB family HTH-type transcriptional regulator compare
RS_RS00555 -3.8 -7.3 phosphomethylpyrimidine synthase compare
RS_RS23335 -3.8 -2.6 phosphoenolpyruvate--protein phosphotransferase compare
RS_RS14315 -3.7 -2.5 1-phosphofructokinase compare
RS_RS07985 -3.6 -3.5 aldose 1-epimerase compare
RS_RS23340 -3.4 -9.2 maltoporin compare
RS_RS23325 -3.4 -6.1 carbohydrate kinase compare
RS_RS23350 -3.3 -1.9 PTS sugar transporter compare
RS_RS11005 -3.2 -3.9 nicotinate-nucleotide adenylyltransferase compare
RS_RS06750 -3.2 -2.2 sulfate ABC transporter permease subunit CysW compare
RS_RS24615 -3.2 -2.2 glucose-6-phosphate dehydrogenase compare
RS_RS25625 -3.2 -1.3 hypothetical protein compare
RS_RS14430 -3.2 -2.2 anthranilate synthase component I compare
RS_RS04505 -3.1 -4.3 prephenate dehydrogenase/arogenate dehydrogenase family protein compare
RS_RS10980 -3.0 -1.2 uracil phosphoribosyltransferase compare
RS_RS22870 -3.0 -1.8 permease compare
RS_RS06760 -3.0 -3.5 CysB family HTH-type transcriptional regulator compare
RS_RS17575 -2.9 -4.0 transcriptional regulator compare
RS_RS09460 -2.9 -5.2 formyltetrahydrofolate deformylase compare
RS_RS25655 -2.8 -1.8 hypothetical protein compare
RS_RS02765 -2.8 -1.1 regulatory protein RecX compare
RS_RS06990 -2.8 -5.0 succinyldiaminopimelate transaminase compare
RS_RS08220 -2.8 -5.6 class I poly(R)-hydroxyalkanoic acid synthase compare
RS_RS04550 -2.7 -3.7 ADP-L-glycero-D-mannoheptose-6-epimerase compare
RS_RS22880 -2.7 -1.5 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
RS_RS00450 -2.6 -2.6 5-formyltetrahydrofolate cyclo-ligase compare
RS_RS00460 -2.6 -1.8 methylenetetrahydrofolate reductase [NAD(P)H] compare
RS_RS18830 -2.6 -1.0 flagellar P-ring protein FlgI compare
RS_RS13455 -2.6 -1.8 DNA starvation/stationary phase protection protein compare
RS_RS14885 -2.6 -1.7 shikimate kinase compare
RS_RS09735 -2.4 -1.0 membrane protein compare
RS_RS08230 -2.4 -4.6 beta-ketoacyl-ACP reductase compare
RS_RS13320 -2.4 -2.3 3-deoxy-7-phosphoheptulonate synthase compare
RS_RS00845 -2.4 -1.6 short-chain dehydrogenase compare
RS_RS24985 -2.4 -0.9 hypothetical protein compare
RS_RS14335 -2.4 -0.9 ABC transporter ATP-binding protein compare
RS_RS20120 -2.3 -1.2 ferredoxin protein compare
RS_RS04510 -2.3 -1.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
RS_RS05390 -2.3 -0.9 maleylacetoacetate isomerase compare
RS_RS08960 -2.2 -0.9 GNAT family N-acetyltransferase compare
RS_RS07010 -2.2 -0.9 cell division protein FtsZ compare
RS_RS23150 -2.2 -0.9 hypothetical protein compare
RS_RS14615 -2.2 -0.9 RNA polymerase sigma factor compare
RS_RS14560 -2.2 -3.0 hypothetical protein compare
RS_RS19165 -2.2 -8.0 TonB-dependent receptor compare
RS_RS11945 -2.2 -1.6 iron-sulfur cluster carrier protein ApbC compare
RS_RS09750 -2.1 -1.5 hypothetical protein compare
RS_RS10040 -2.1 -1.4 malate dehydrogenase compare
RS_RS10990 -2.1 -0.8 YebC/PmpR family DNA-binding transcriptional regulator compare
RS_RS13005 -2.1 -0.8 glutathione S-transferase family protein compare
RS_RS11780 -2.1 -5.0 NAD+ synthase compare
RS_RS08045 -2.0 -2.7 DNA-binding response regulator compare
RS_RS12115 -2.0 -1.9 DNA polymerase III subunit chi compare
RS_RS15425 -2.0 -1.1 hypothetical protein compare
RS_RS07625 -2.0 -2.7 leucine efflux protein LeuE compare
RS_RS06285 -1.9 -1.3 sterol desaturase family protein compare
RS_RS13410 -1.9 -0.8 type IV pilus modification protein PilV compare
RS_RS13925 -1.9 -2.0 alkyl hydroperoxide reductase compare
RS_RS21975 -1.9 -7.7 DegT/DnrJ/EryC1/StrS aminotransferase family protein compare
RS_RS06870 -1.9 -4.7 lysophospholipid transporter LplT compare
RS_RS13985 -1.9 -1.7 hemagglutinin compare
RS_RS24280 -1.9 -2.7 alpha/beta hydrolase compare
RS_RS06745 -1.9 -2.2 sulfate ABC transporter permease subunit CysT compare
RS_RS10035 -1.8 -1.3 GntR family transcriptional regulator compare
RS_RS05805 -1.8 -2.0 peptidyl-prolyl cis-trans isomerase compare
RS_RS16235 -1.8 -1.2 hypothetical protein compare
RS_RS12140 -1.8 -1.0 5-carboxymethyl-2-hydroxymuconate isomerase compare
RS_RS08330 -1.8 -1.2 efflux RND transporter periplasmic adaptor subunit compare
RS_RS01830 -1.8 -2.1 protoheme IX farnesyltransferase compare
RS_RS08050 -1.8 -6.5 PAS domain-containing sensor histidine kinase compare
RS_RS26195 -1.8 -2.2 hypothetical protein compare
RS_RS02545 -1.7 -2.4 nucleotidyltransferase family protein compare
RS_RS00275 -1.7 -0.7 dienelactone hydrolase compare
RS_RS07380 -1.7 -2.6 MoxR family ATPase compare
RS_RS05770 -1.7 -0.7 GMP synthase compare
RS_RS14810 -1.7 -1.6 ABC transporter permease compare
RS_RS17205 -1.7 -7.0 cold-shock protein compare
RS_RS12295 -1.7 -5.4 quinolinate synthase compare
RS_RS20410 -1.7 -3.2 AraC family transcriptional regulator compare
RS_RS03550 -1.7 -2.3 DUF4337 domain-containing protein compare
RS_RS21980 -1.7 -5.7 acetyltransferase compare
RS_RS01795 -1.7 -1.1 cytochrome c oxidase assembly protein compare
RS_RS06405 -1.6 -0.6 cbb3-type cytochrome oxidase subunit 3 compare
RS_RS13890 -1.6 -3.3 shikimate dehydrogenase compare
RS_RS01790 -1.6 -6.5 cytochrome c oxidase subunit I compare
RS_RS01745 -1.6 -2.4 rhodanese-like domain-containing protein compare
RS_RS14665 -1.5 -1.1 cytochrome c compare
RS_RS23805 -1.5 -1.0 YggT family protein compare
RS_RS01750 -1.5 -4.4 glutaredoxin 3 compare
RS_RS08595 -1.5 -1.7 lysozyme compare
RS_RS13955 -1.5 -0.6 2-Cys peroxiredoxin compare
RS_RS06700 -1.5 -1.4 sulfate ABC transporter substrate-binding protein compare
RS_RS04740 -1.5 -1.0 hypothetical protein compare
RS_RS07325 -1.5 -0.9 hypothetical protein compare
RS_RS17715 -1.5 -1.4 hypothetical protein compare
RS_RS03455 -1.5 -1.4 glycosyltransferase family 2 protein compare
RS_RS25645 -1.5 -1.0 hypothetical protein compare
RS_RS14855 -1.4 -1.4 glutamate synthase subunit beta compare
RS_RS07080 -1.4 -1.0 RIP metalloprotease RseP compare
RS_RS22170 -1.4 -1.6 EamA/RhaT family transporter compare
RS_RS07805 -1.4 -0.9 hypothetical protein compare
RS_RS12290 -1.4 -3.9 nicotinate-nucleotide diphosphorylase (carboxylating) compare
RS_RS09975 -1.4 -1.0 tRNA pseudouridine(38-40) synthase TruA compare
RS_RS05080 -1.4 -0.5 Fe-S assembly protein IscX compare
RS_RS14600 -1.4 -1.7 cytochrome o ubiquinol oxidase subunit III compare
RS_RS00835 -1.4 -0.9 oxidoreductase compare
RS_RS05125 -1.4 -2.6 DNA recombination protein RmuC compare
RS_RS11870 -1.4 -1.7 RNA 2',3'-cyclic phosphodiesterase compare
RS_RS03965 -1.4 -2.2 RNA-binding S4 domain-containing protein compare
RS_RS06035 -1.4 -1.2 protein-L-isoaspartate O-methyltransferase compare
RS_RS25460 -1.4 -2.4 peptide methionine sulfoxide reductase compare
RS_RS12150 -1.4 -0.9 sulfate adenylyltransferase subunit 1 compare
RS_RS01525 -1.4 -0.5 SPOR domain-containing protein compare
RS_RS01805 -1.3 -6.6 cytochrome c oxidase subunit 3 compare
RS_RS10365 -1.3 -2.8 NAD(P)H quinone oxidoreductase compare
RS_RS14050 -1.3 -2.7 inner membrane protein YpjD compare
RS_RS25480 -1.3 -0.5 hypothetical protein compare
RS_RS18685 -1.3 -0.9 Cd(II)/Pb(II)-responsive transcriptional regulator compare
RS_RS10075 -1.3 -3.9 DUF2863 domain-containing protein compare
RS_RS03160 -1.3 -0.5 cytochrome c compare
RS_RS01430 -1.3 -0.9 response regulator compare
RS_RS06915 -1.3 -3.5 ABC transporter ATP-binding protein compare
RS_RS12145 -1.3 -0.9 uroporphyrinogen-III C-methyltransferase compare
RS_RS21385 -1.3 -1.4 oxidoreductase compare
RS_RS14675 -1.3 -3.6 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
RS_RS02725 -1.3 -1.8 FAD-dependent monooxygenase compare
RS_RS09095 -1.3 -1.8 DJ-1/PfpI family protein compare
RS_RS02195 -1.3 -0.7 hypothetical protein compare
RS_RS19160 -1.3 -3.6 RNA polymerase sigma factor compare
RS_RS01920 -1.3 -0.6 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
RS_RS17580 -1.3 -2.1 GNAT family N-acetyltransferase compare
RS_RS14690 -1.3 -0.9 PDZ domain-containing protein compare
RS_RS12160 -1.3 -0.7 phosphoadenylyl-sulfate reductase compare
RS_RS07560 -1.2 -0.7 universal stress protein compare
RS_RS03845 -1.2 -3.4 flavin reductase compare
RS_RS09740 -1.2 -0.5 tail protein X compare
RS_RS01815 -1.2 -4.5 SURF1 family protein compare
RS_RS09545 -1.2 -0.8 (2Fe-2S)-binding protein compare
RS_RS02860 -1.2 -0.6 phosphoglycerate kinase compare
RS_RS01765 -1.2 -0.5 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL compare
RS_RS16950 -1.2 -0.5 potassium-transporting ATPase subunit B compare
RS_RS18420 -1.2 -5.8 glucan biosynthesis protein D compare
RS_RS14670 -1.2 -4.1 cytochrome b compare
RS_RS25600 -1.2 -3.2 hypothetical protein compare
RS_RS00665 -1.2 -4.8 lauroyl acyltransferase compare
RS_RS07585 -1.2 -0.4 conjugal transfer protein TraR compare
RS_RS16825 -1.2 -5.5 SET domain-containing protein-lysine N-methyltransferase compare
RS_RS18825 -1.2 -0.9 flagellar L-ring protein FlgH compare
RS_RS17355 -1.2 -2.0 MarR family transcriptional regulator compare
RS_RS11095 -1.2 -4.1 ATP-dependent helicase compare
RS_RS12680 -1.2 -0.8 biopolymer transporter ExbD compare
RS_RS07845 -1.2 -0.9 NAD(P)H:quinone oxidoreductase compare
RS_RS06120 -1.2 -2.2 FtsH protease activity modulator HflK compare
RS_RS03505 -1.2 -1.9 protein-L-isoaspartate O-methyltransferase compare
RS_RS02360 -1.1 -2.1 enoyl-CoA hydratase compare
RS_RS14805 -1.1 -0.4 BolA family transcriptional regulator compare
RS_RS25915 -1.1 -1.3 hypothetical protein compare
RS_RS23355 -1.1 -2.8 LacI family transcriptional regulator compare
RS_RS13165 -1.1 -5.4 polynucleotide adenylyltransferase PcnB compare
RS_RS14935 -1.1 -1.8 sulfoxide reductase heme-binding subunit YedZ compare
RS_RS02605 -1.1 -1.6 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase compare
RS_RS05600 -1.1 -1.6 alpha/beta hydrolase compare
RS_RS22010 -1.1 -2.1 transferase compare
RS_RS07810 -1.1 -1.2 hypothetical protein compare
RS_RS06300 -1.1 -0.4 rhodanese-like domain-containing protein compare
RS_RS08975 -1.1 -2.5 hypothetical protein compare
RS_RS08700 -1.1 -1.2 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase compare
RS_RS05225 -1.1 -1.0 RNA polymerase sigma factor RpoE compare
RS_RS09370 -1.1 -1.0 DUF1794 domain-containing protein compare
RS_RS15365 -1.1 -3.4 AGE family epimerase/isomerase compare
RS_RS04170 -1.1 -4.7 hypothetical protein compare
RS_RS15770 -1.1 -2.3 MarR family transcriptional regulator compare
RS_RS05025 -1.1 -2.9 ABC transporter permease compare
RS_RS12170 -1.1 -0.7 nitrite/sulfite reductase compare
RS_RS14970 -1.1 -1.8 cytochrome c4 compare
RS_RS21280 -1.1 -1.8 EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein compare
RS_RS10945 -1.1 -1.3 radical SAM protein compare
RS_RS24690 -1.0 -0.7 LysR family transcriptional regulator compare
RS_RS10840 -1.0 -3.6 oxygen-independent coproporphyrinogen III oxidase-like protein compare
RS_RS09175 -1.0 -0.8 cupin domain-containing protein compare
RS_RS15860 -1.0 -1.1 cold-shock protein compare
RS_RS03325 -1.0 -1.1 Flp family type IVb pilin compare
RS_RS13275 -1.0 -1.7 DNA repair protein RecN compare
RS_RS03405 -1.0 -3.7 bifunctional pyrimidine operon transcriptional regulator/uracil phosphoribosyltransferase compare


Specific Phenotypes

For 4 genes in this experiment

For carbon source Sucrose in Ralstonia solanacearum GMI1000

For carbon source Sucrose across organisms