Experiment set18S391 for Ralstonia solanacearum GMI1000

Compare to:

Sodium succinate dibasic hexahydrate carbon source

200 most important genes:

  gene name fitness t score description  
RS_RS06650 -5.6 -5.5 pyridoxal phosphate-dependent aminotransferase compare
RS_RS02250 -5.4 -9.0 FAD-linked oxidase compare
RS_RS07885 -4.5 -1.8 chorismate synthase compare
RS_RS00135 -4.4 -5.2 homoserine O-acetyltransferase compare
RS_RS04490 -4.3 -4.2 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
RS_RS12155 -4.3 -2.9 sulfate adenylyltransferase subunit CysD compare
RS_RS04495 -4.2 -7.1 prephenate dehydratase compare
RS_RS24735 -4.2 -5.0 hypothetical protein compare
RS_RS22880 -4.2 -1.7 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
RS_RS15365 -4.1 -7.3 AGE family epimerase/isomerase compare
RS_RS14865 -4.0 -3.6 transposase compare
RS_RS08265 -3.9 -3.6 phosphoserine phosphatase SerB compare
RS_RS02605 -3.8 -3.1 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase compare
RS_RS14860 -3.8 -5.9 glutamate synthase subunit alpha compare
RS_RS04550 -3.7 -3.8 ADP-L-glycero-D-mannoheptose-6-epimerase compare
RS_RS21020 -3.3 -2.1 transcription regulator protein compare
RS_RS10430 -3.2 -5.4 DUF3619 domain-containing protein compare
RS_RS00555 -3.1 -8.3 phosphomethylpyrimidine synthase compare
RS_RS06870 -3.1 -5.6 lysophospholipid transporter LplT compare
RS_RS12180 -3.1 -3.7 CysB family HTH-type transcriptional regulator compare
RS_RS06760 -3.1 -3.6 CysB family HTH-type transcriptional regulator compare
RS_RS12290 -2.9 -4.4 nicotinate-nucleotide diphosphorylase (carboxylating) compare
RS_RS11780 -2.8 -5.4 NAD+ synthase compare
RS_RS04505 -2.7 -4.8 prephenate dehydrogenase/arogenate dehydrogenase family protein compare
RS_RS18830 -2.7 -1.0 flagellar P-ring protein FlgI compare
RS_RS11005 -2.6 -4.4 nicotinate-nucleotide adenylyltransferase compare
RS_RS09735 -2.6 -1.0 membrane protein compare
RS_RS13455 -2.5 -1.7 DNA starvation/stationary phase protection protein compare
RS_RS00460 -2.5 -1.7 methylenetetrahydrofolate reductase [NAD(P)H] compare
RS_RS19165 -2.5 -8.3 TonB-dependent receptor compare
RS_RS14885 -2.5 -1.6 shikimate kinase compare
RS_RS06700 -2.4 -1.7 sulfate ABC transporter substrate-binding protein compare
RS_RS01625 -2.4 -6.5 C4-dicarboxylate transporter 1 conserved
RS_RS01630 -2.3 -3.6 sensor histidine kinase conserved
RS_RS23150 -2.3 -0.9 hypothetical protein compare
RS_RS05390 -2.3 -0.9 maleylacetoacetate isomerase compare
RS_RS16165 -2.3 -2.0 hypothetical protein compare
RS_RS09350 -2.3 -1.6 MarR family transcriptional regulator compare
RS_RS04510 -2.3 -1.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
RS_RS02830 -2.3 -1.8 lipopolysaccharide heptosyltransferase II compare
RS_RS18825 -2.3 -1.5 flagellar L-ring protein FlgH compare
RS_RS12295 -2.2 -7.0 quinolinate synthase compare
RS_RS06880 -2.2 -0.8 DNA repair protein RadA compare
RS_RS05740 -2.2 -0.8 LysR family transcriptional regulator compare
RS_RS13845 -2.1 -6.1 NADP-dependent malic enzyme compare
RS_RS11945 -2.1 -1.9 iron-sulfur cluster carrier protein ApbC compare
RS_RS14430 -2.1 -8.0 anthranilate synthase component I compare
RS_RS05935 -2.1 -0.8 membrane protein compare
RS_RS13005 -2.0 -0.8 glutathione S-transferase family protein compare
RS_RS26075 -2.0 -0.8 hypothetical protein compare
RS_RS08665 -2.0 -1.3 tRNA-Val compare
RS_RS12830 -2.0 -8.5 membrane protein compare
RS_RS08330 -1.9 -1.3 efflux RND transporter periplasmic adaptor subunit compare
RS_RS21390 -1.9 -1.1 class II aldolase family protein compare
RS_RS13410 -1.9 -0.7 type IV pilus modification protein PilV compare
RS_RS14840 -1.9 -3.5 ABC transporter permease compare
RS_RS25070 -1.9 -2.5 acyl carrier protein compare
RS_RS08150 -1.9 -1.8 tRNA-Met compare
RS_RS10040 -1.8 -1.7 malate dehydrogenase compare
RS_RS05770 -1.8 -0.7 GMP synthase compare
RS_RS11870 -1.8 -1.3 RNA 2',3'-cyclic phosphodiesterase compare
RS_RS10980 -1.8 -1.0 uracil phosphoribosyltransferase compare
RS_RS22805 -1.8 -0.7 hypothetical protein compare
RS_RS14825 -1.8 -12.4 hypothetical protein compare
RS_RS06750 -1.8 -2.4 sulfate ABC transporter permease subunit CysW compare
RS_RS03965 -1.7 -2.4 RNA-binding S4 domain-containing protein compare
RS_RS24570 -1.7 -1.6 hypothetical protein compare
RS_RS10435 -1.7 -2.4 DUF3106 domain-containing protein compare
RS_RS08685 -1.7 -1.3 arylesterase compare
RS_RS08335 -1.7 -2.3 AcrB/AcrD/AcrF family protein compare
RS_RS24410 -1.7 -3.2 helix-turn-helix transcriptional regulator compare
RS_RS22170 -1.7 -1.3 EamA/RhaT family transporter compare
RS_RS13320 -1.7 -2.3 3-deoxy-7-phosphoheptulonate synthase compare
RS_RS23805 -1.7 -1.1 YggT family protein compare
RS_RS14845 -1.7 -12.0 ABC transporter ATP-binding protein compare
RS_RS24405 -1.6 -0.9 DUF1059 domain-containing protein compare
RS_RS00275 -1.6 -0.6 dienelactone hydrolase compare
RS_RS12215 -1.6 -6.1 NAD-dependent dehydratase compare
RS_RS19160 -1.6 -2.6 RNA polymerase sigma factor compare
RS_RS25400 -1.6 -1.5 hypothetical protein compare
RS_RS22120 -1.6 -1.2 DUF2282 domain-containing protein compare
RS_RS17330 -1.6 -1.1 DNA-binding protein compare
RS_RS10365 -1.6 -3.7 NAD(P)H quinone oxidoreductase compare
RS_RS14830 -1.5 -12.2 ABC transporter compare
RS_RS24670 -1.5 -4.1 hypothetical protein compare
RS_RS07805 -1.5 -1.0 hypothetical protein compare
RS_RS09435 -1.5 -1.8 AlpA family phage regulatory protein compare
RS_RS14835 -1.5 -11.2 outer membrane lipid asymmetry maintenance protein MlaD compare
RS_RS16730 -1.5 -0.6 hypothetical protein compare
RS_RS01645 -1.5 -0.7 O-acetyl-ADP-ribose deacetylase compare
RS_RS10715 -1.5 -0.6 hypothetical protein compare
RS_RS06055 -1.5 -4.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD compare
RS_RS00665 -1.5 -5.7 lauroyl acyltransferase compare
RS_RS05080 -1.5 -0.6 Fe-S assembly protein IscX compare
RS_RS13280 -1.4 -1.4 hypothetical protein compare
RS_RS14590 -1.4 -3.3 energy-dependent translational throttle protein EttA compare
RS_RS20405 -1.4 -4.4 EamA/RhaT family transporter compare
RS_RS02015 -1.4 -2.0 ribosomal subunit interface protein compare
RS_RS13660 -1.4 -2.8 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha compare
RS_RS18685 -1.4 -0.9 Cd(II)/Pb(II)-responsive transcriptional regulator compare
RS_RS09740 -1.4 -0.5 tail protein X compare
RS_RS08545 -1.4 -3.5 phage tail protein compare
RS_RS07560 -1.3 -0.7 universal stress protein compare
RS_RS08045 -1.3 -2.0 DNA-binding response regulator compare
RS_RS20410 -1.3 -2.8 AraC family transcriptional regulator compare
RS_RS19130 -1.3 -1.0 hypothetical protein compare
RS_RS25240 -1.3 -0.9 hypothetical protein compare
RS_RS12115 -1.3 -1.7 DNA polymerase III subunit chi compare
RS_RS03160 -1.3 -0.5 cytochrome c compare
RS_RS12890 -1.3 -2.4 metal-binding protein compare
RS_RS00835 -1.3 -0.9 oxidoreductase compare
RS_RS01525 -1.2 -0.5 SPOR domain-containing protein compare
RS_RS12160 -1.2 -0.7 phosphoadenylyl-sulfate reductase compare
RS_RS21155 -1.2 -0.9 leucine-rich repeat domain-containing protein compare
RS_RS07585 -1.2 -0.5 conjugal transfer protein TraR compare
RS_RS02430 -1.2 -3.9 OsmC family protein compare
RS_RS16830 -1.2 -3.2 HU family DNA-binding protein compare
RS_RS12150 -1.2 -1.4 sulfate adenylyltransferase subunit 1 compare
RS_RS06285 -1.2 -1.2 sterol desaturase family protein compare
RS_RS25655 -1.2 -1.0 hypothetical protein compare
RS_RS00925 -1.2 -0.7 hypothetical protein compare
RS_RS01430 -1.2 -0.8 response regulator compare
RS_RS06300 -1.2 -0.4 rhodanese-like domain-containing protein compare
RS_RS04170 -1.2 -3.3 hypothetical protein compare
RS_RS11920 -1.2 -0.4 formate dehydrogenase compare
RS_RS11860 -1.2 -1.0 membrane protein compare
RS_RS05225 -1.2 -1.1 RNA polymerase sigma factor RpoE compare
RS_RS14690 -1.2 -0.8 PDZ domain-containing protein compare
RS_RS15510 -1.2 -6.2 tripartite tricarboxylate transporter substrate binding protein compare
RS_RS06225 -1.1 -1.8 sugar ABC transporter ATP-binding protein compare
RS_RS09750 -1.1 -1.3 hypothetical protein compare
RS_RS08050 -1.1 -5.5 PAS domain-containing sensor histidine kinase compare
RS_RS01635 -1.1 -0.9 sigma-54-dependent Fis family transcriptional regulator compare
RS_RS13805 -1.1 -0.5 2-dehydro-3-deoxygalactonokinase compare
RS_RS22445 -1.1 -1.4 trehalose-phosphatase compare
RS_RS02860 -1.1 -0.6 phosphoglycerate kinase compare
RS_RS08220 -1.1 -3.3 class I poly(R)-hydroxyalkanoic acid synthase compare
RS_RS07930 -1.1 -0.8 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
RS_RS10375 -1.1 -1.4 polyribonucleotide nucleotidyltransferase compare
RS_RS11220 -1.1 -1.0 DNA-dependent helicase compare
RS_RS10210 -1.1 -0.6 urease subunit gamma compare
RS_RS00990 -1.1 -1.9 Hsp20/alpha crystallin family protein compare
RS_RS18420 -1.1 -3.6 glucan biosynthesis protein D compare
RS_RS24985 -1.1 -0.6 hypothetical protein compare
RS_RS24690 -1.1 -0.8 LysR family transcriptional regulator compare
RS_RS04485 -1.1 -1.2 DUF2059 domain-containing protein compare
RS_RS11825 -1.1 -4.9 heme biosynthesis protein HemY compare
RS_RS01765 -1.1 -0.4 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL compare
RS_RS10415 -1.1 -0.4 acetolactate synthase small subunit compare
RS_RS03610 -1.1 -2.3 type IV pilin protein compare
RS_RS12145 -1.1 -1.3 uroporphyrinogen-III C-methyltransferase compare
RS_RS08650 -1.1 -1.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
RS_RS10425 -1.1 -1.0 RNA polymerase sigma factor compare
RS_RS08960 -1.1 -0.6 GNAT family N-acetyltransferase compare
RS_RS10070 -1.1 -2.6 hypothetical protein compare
RS_RS14805 -1.0 -0.4 BolA family transcriptional regulator compare
RS_RS24325 -1.0 -1.5 potassium transporter Kef compare
RS_RS14675 -1.0 -3.0 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
RS_RS08465 -1.0 -0.4 HNH endonuclease compare
RS_RS12760 -1.0 -2.6 Cys-tRNA(Pro) deacylase compare
RS_RS20120 -1.0 -1.1 ferredoxin protein compare
RS_RS04470 -1.0 -0.6 glycine zipper 2TM domain-containing protein compare
RS_RS10650 -1.0 -4.5 NADP-dependent malic enzyme compare
RS_RS05775 -1.0 -2.7 XRE family transcriptional regulator compare
RS_RS08550 -1.0 -2.2 tail fiber assembly protein compare
RS_RS03455 -1.0 -1.7 glycosyltransferase family 2 protein compare
RS_RS10945 -1.0 -0.7 radical SAM protein compare
RS_RS14405 -1.0 -1.2 murein transglycosylase compare
RS_RS25990 -1.0 -1.0 hypothetical protein compare
RS_RS06315 -1.0 -0.7 PAS domain-containing sensor histidine kinase compare
RS_RS04375 -1.0 -0.7 hypothetical protein compare
RS_RS21875 -1.0 -1.5 4-hydroxybutyrate dehydrogenase compare
RS_RS24710 -1.0 -1.2 arginase compare
RS_RS23815 -1.0 -1.6 AraC family transcriptional regulator compare
RS_RS06940 -1.0 -1.2 D-aminopeptidase compare
RS_RS09760 -0.9 -3.6 capsid scaffolding protein compare
RS_RS03745 -0.9 -1.5 3-deoxy-7-phosphoheptulonate synthase compare
RS_RS00735 -0.9 -1.4 MarR family transcriptional regulator compare
RS_RS03550 -0.9 -1.7 DUF4337 domain-containing protein compare
RS_RS22995 -0.9 -1.0 DUF2239 domain-containing protein compare
RS_RS26480 -0.9 -0.5 hypothetical protein compare
RS_RS06375 -0.9 -0.6 cell division protein ZapE compare
RS_RS14935 -0.9 -1.3 sulfoxide reductase heme-binding subunit YedZ compare
RS_RS05805 -0.9 -1.3 peptidyl-prolyl cis-trans isomerase compare
RS_RS01685 -0.9 -1.3 nitrogen regulatory protein P-II 1 compare
RS_RS14365 -0.9 -0.3 23S ribosomal RNA compare
RS_RS00465 -0.9 -2.0 phage holin family protein compare
RS_RS09830 -0.9 -0.6 fumarate hydratase compare
RS_RS08810 -0.9 -2.2 peptidyl-prolyl cis-trans isomerase compare
RS_RS07295 -0.9 -0.5 7-carboxy-7-deazaguanine synthase compare
RS_RS03715 -0.9 -1.6 7-cyano-7-deazaguanine synthase compare
RS_RS21195 -0.9 -4.4 FecR family protein compare
RS_RS14490 -0.9 -1.0 thiol:disulfide interchange protein compare
RS_RS24575 -0.9 -1.2 hypothetical protein compare
RS_RS05175 -0.9 -0.5 S-adenosylmethionine-dependent methyltransferase compare
RS_RS13895 -0.9 -1.0 energy transducer TonB compare
RS_RS06745 -0.9 -2.8 sulfate ABC transporter permease subunit CysT compare
RS_RS19170 -0.9 -1.6 siderophore biosynthesis protein SbnA compare
RS_RS09175 -0.9 -0.7 cupin domain-containing protein compare
RS_RS08100 -0.9 -3.1 D-alanyl-D-alanine endopeptidase compare


Specific Phenotypes

For 1 genes in this experiment

For carbon source Sodium succinate dibasic hexahydrate in Ralstonia solanacearum GMI1000

For carbon source Sodium succinate dibasic hexahydrate across organisms