Experiment set18S388 for Ralstonia solanacearum GMI1000

Compare to:

Sodium pyruvate carbon source

200 most important genes:

  gene name fitness t score description  
RS_RS06650 -7.7 -5.3 pyridoxal phosphate-dependent aminotransferase compare
RS_RS02250 -6.2 -11.9 FAD-linked oxidase compare
RS_RS07130 -6.0 -10.8 phosphoenolpyruvate synthase compare
RS_RS04495 -6.0 -9.1 prephenate dehydratase compare
RS_RS04490 -5.8 -4.0 3-phosphoserine/phosphohydroxythreonine aminotransferase compare
RS_RS11840 -5.8 -12.4 phosphoenolpyruvate carboxylase compare
RS_RS12155 -5.6 -3.8 sulfate adenylyltransferase subunit CysD compare
RS_RS07885 -5.4 -1.7 chorismate synthase compare
RS_RS24735 -5.3 -8.0 hypothetical protein compare
RS_RS14865 -5.1 -5.0 transposase compare
RS_RS08265 -5.1 -3.8 phosphoserine phosphatase SerB compare
RS_RS22880 -5.0 -1.6 3,4-dihydroxy-2-butanone-4-phosphate synthase compare
RS_RS00135 -5.0 -10.6 homoserine O-acetyltransferase compare
RS_RS14860 -4.9 -11.0 glutamate synthase subunit alpha compare
RS_RS12180 -4.3 -5.1 CysB family HTH-type transcriptional regulator compare
RS_RS01830 -4.2 -2.7 protoheme IX farnesyltransferase compare
RS_RS06760 -4.1 -5.5 CysB family HTH-type transcriptional regulator compare
RS_RS13455 -3.9 -2.7 DNA starvation/stationary phase protection protein compare
RS_RS00460 -3.8 -2.6 methylenetetrahydrofolate reductase [NAD(P)H] compare
RS_RS06700 -3.8 -2.6 sulfate ABC transporter substrate-binding protein compare
RS_RS14430 -3.8 -10.6 anthranilate synthase component I compare
RS_RS14885 -3.8 -2.1 shikimate kinase compare
RS_RS24405 -3.8 -1.2 DUF1059 domain-containing protein compare
RS_RS08045 -3.7 -3.3 DNA-binding response regulator compare
RS_RS10040 -3.6 -2.1 malate dehydrogenase compare
RS_RS08050 -3.6 -11.7 PAS domain-containing sensor histidine kinase compare
RS_RS02605 -3.6 -3.3 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase compare
RS_RS18830 -3.5 -1.1 flagellar P-ring protein FlgI compare
RS_RS00115 -3.5 -16.0 DUF466 domain-containing protein conserved
RS_RS06285 -3.5 -2.4 sterol desaturase family protein compare
RS_RS09735 -3.5 -1.1 membrane protein compare
RS_RS00110 -3.4 -17.9 carbon starvation protein A conserved
RS_RS13320 -3.4 -4.0 3-deoxy-7-phosphoheptulonate synthase compare
RS_RS13895 -3.3 -2.0 energy transducer TonB compare
RS_RS08330 -3.3 -2.3 efflux RND transporter periplasmic adaptor subunit compare
RS_RS08665 -3.3 -2.3 tRNA-Val compare
RS_RS11945 -3.3 -2.8 iron-sulfur cluster carrier protein ApbC compare
RS_RS00100 -3.3 -11.0 DNA-binding response regulator conserved
RS_RS05390 -3.2 -1.0 maleylacetoacetate isomerase compare
RS_RS07010 -3.2 -1.0 cell division protein FtsZ compare
RS_RS04510 -3.2 -1.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
RS_RS10435 -3.1 -2.9 DUF3106 domain-containing protein compare
RS_RS15365 -3.0 -9.1 AGE family epimerase/isomerase compare
RS_RS02220 -3.0 -4.3 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF compare
RS_RS06750 -2.9 -3.1 sulfate ABC transporter permease subunit CysW compare
RS_RS04505 -2.9 -6.5 prephenate dehydrogenase/arogenate dehydrogenase family protein compare
RS_RS00555 -2.8 -8.2 phosphomethylpyrimidine synthase compare
RS_RS06745 -2.8 -4.6 sulfate ABC transporter permease subunit CysT compare
RS_RS10430 -2.8 -4.3 DUF3619 domain-containing protein compare
RS_RS11780 -2.8 -6.0 NAD+ synthase compare
RS_RS18685 -2.7 -1.5 Cd(II)/Pb(II)-responsive transcriptional regulator compare
RS_RS13410 -2.7 -0.9 type IV pilus modification protein PilV compare
RS_RS12150 -2.7 -1.9 sulfate adenylyltransferase subunit 1 compare
RS_RS22170 -2.7 -2.4 EamA/RhaT family transporter compare
RS_RS12295 -2.7 -10.1 quinolinate synthase compare
RS_RS02830 -2.7 -2.8 lipopolysaccharide heptosyltransferase II compare
RS_RS25645 -2.6 -1.6 hypothetical protein compare
RS_RS11005 -2.6 -4.9 nicotinate-nucleotide adenylyltransferase compare
RS_RS14690 -2.5 -1.7 PDZ domain-containing protein compare
RS_RS06870 -2.5 -4.7 lysophospholipid transporter LplT compare
RS_RS07930 -2.5 -2.4 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
RS_RS18825 -2.5 -1.6 flagellar L-ring protein FlgH compare
RS_RS12170 -2.4 -1.7 nitrite/sulfite reductase compare
RS_RS12290 -2.4 -5.5 nicotinate-nucleotide diphosphorylase (carboxylating) compare
RS_RS25480 -2.4 -0.7 hypothetical protein compare
RS_RS16730 -2.3 -0.7 hypothetical protein compare
RS_RS09750 -2.3 -2.4 hypothetical protein compare
RS_RS06445 -2.3 -1.5 23S rRNA pseudouridylate synthase B compare
RS_RS19495 -2.2 -0.9 DUF3005 domain-containing protein compare
RS_RS09715 -2.2 -0.7 tail protein compare
RS_RS09740 -2.2 -0.7 tail protein X compare
RS_RS19165 -2.2 -11.6 TonB-dependent receptor compare
RS_RS12145 -2.2 -2.5 uroporphyrinogen-III C-methyltransferase compare
RS_RS14445 -2.2 -1.2 Anthranilate phosphoribosyltransferase 1 compare
RS_RS20405 -2.2 -4.7 EamA/RhaT family transporter compare
RS_RS07585 -2.2 -0.6 conjugal transfer protein TraR compare
RS_RS00845 -2.2 -2.0 short-chain dehydrogenase compare
RS_RS12160 -2.1 -0.9 phosphoadenylyl-sulfate reductase compare
RS_RS03160 -2.1 -0.6 cytochrome c compare
RS_RS10075 -2.1 -8.1 DUF2863 domain-containing protein compare
RS_RS00925 -2.1 -0.9 hypothetical protein compare
RS_RS04550 -2.0 -1.6 ADP-L-glycero-D-mannoheptose-6-epimerase compare
RS_RS05225 -2.0 -2.3 RNA polymerase sigma factor RpoE compare
RS_RS17960 -2.0 -0.9 hypothetical protein compare
RS_RS01515 -2.0 -1.4 ferritin compare
RS_RS00105 -2.0 -7.1 sensor histidine kinase conserved
RS_RS13890 -2.0 -5.7 shikimate dehydrogenase compare
RS_RS12115 -2.0 -2.3 DNA polymerase III subunit chi compare
RS_RS08960 -2.0 -0.8 GNAT family N-acetyltransferase compare
RS_RS02860 -1.9 -0.8 phosphoglycerate kinase compare
RS_RS10415 -1.9 -0.6 acetolactate synthase small subunit compare
RS_RS01405 -1.9 -1.2 SPOR domain-containing protein compare
RS_RS14805 -1.9 -0.6 BolA family transcriptional regulator compare
RS_RS00520 -1.9 -1.3 hypothetical protein compare
RS_RS08465 -1.9 -0.6 HNH endonuclease compare
RS_RS04470 -1.9 -0.8 glycine zipper 2TM domain-containing protein compare
RS_RS03460 -1.9 -1.8 glycosyltransferase family 2 protein compare
RS_RS08335 -1.9 -4.9 AcrB/AcrD/AcrF family protein compare
RS_RS07295 -1.9 -1.3 7-carboxy-7-deazaguanine synthase compare
RS_RS06585 -1.8 -1.1 inorganic phosphate transporter compare
RS_RS08220 -1.8 -5.2 class I poly(R)-hydroxyalkanoic acid synthase compare
RS_RS15855 -1.8 -1.0 hypothetical protein compare
RS_RS05630 -1.8 -0.5 hypothetical protein compare
RS_RS07925 -1.8 -1.6 RidA family protein compare
RS_RS14365 -1.8 -0.5 23S ribosomal RNA compare
RS_RS00930 -1.8 -0.5 conjugal transfer protein TraR compare
RS_RS08595 -1.8 -2.1 lysozyme compare
RS_RS26480 -1.8 -0.8 hypothetical protein compare
RS_RS22020 -1.7 -7.1 EPS I polysaccharide export inner membrane protein EpsE compare
RS_RS06880 -1.7 -0.7 DNA repair protein RadA compare
RS_RS00450 -1.7 -4.4 5-formyltetrahydrofolate cyclo-ligase compare
RS_RS05130 -1.7 -0.7 hypothetical protein compare
RS_RS01735 -1.7 -0.9 S41 family peptidase compare
RS_RS03505 -1.7 -2.2 protein-L-isoaspartate O-methyltransferase compare
RS_RS01430 -1.7 -1.4 response regulator compare
RS_RS10000 -1.7 -0.7 3-isopropylmalate dehydratase large subunit compare
RS_RS25095 -1.7 -0.5 membrane protein compare
RS_RS10375 -1.7 -2.0 polyribonucleotide nucleotidyltransferase compare
RS_RS23805 -1.6 -1.7 YggT family protein compare
RS_RS01400 -1.6 -1.9 thiol:disulfide interchange protein DsbA/DsbL compare
RS_RS02580 -1.6 -1.8 ribosomal RNA small subunit methyltransferase A compare
RS_RS18380 -1.6 -7.1 sensor domain-containing diguanylate cyclase compare
RS_RS06375 -1.6 -2.3 cell division protein ZapE compare
RS_RS20930 -1.6 -1.0 translesion DNA synthesis-associated protein ImuA compare
RS_RS05360 -1.6 -1.2 glucarate dehydratase compare
RS_RS24690 -1.6 -2.5 LysR family transcriptional regulator compare
RS_RS21400 -1.6 -0.5 2-keto-4-pentenoate hydratase compare
RS_RS07640 -1.6 -1.0 DUF4149 domain-containing protein compare
RS_RS05020 -1.6 -2.3 LacI family transcriptional regulator compare
RS_RS06120 -1.5 -2.0 FtsH protease activity modulator HflK compare
RS_RS14405 -1.5 -2.5 murein transglycosylase compare
RS_RS07540 -1.5 -0.6 aldo/keto reductase compare
RS_RS03495 -1.5 -1.5 channel protein TolC compare
RS_RS02780 -1.5 -0.8 succinate--CoA ligase subunit alpha compare
RS_RS01360 -1.5 -1.4 carbonate dehydratase compare
RS_RS25880 -1.5 -0.8 hypothetical protein compare
RS_RS24710 -1.5 -1.5 arginase compare
RS_RS13355 -1.5 -1.6 glycolate oxidase subunit GlcE compare
RS_RS08205 -1.5 -3.8 RluA family pseudouridine synthase compare
RS_RS25085 -1.4 -0.4 hypothetical protein compare
RS_RS10070 -1.4 -4.1 hypothetical protein compare
RS_RS09960 -1.4 -2.5 site-specific DNA-methyltransferase compare
RS_RS18420 -1.4 -6.1 glucan biosynthesis protein D compare
RS_RS12465 -1.4 -1.2 hypothetical protein compare
RS_RS01645 -1.4 -1.0 O-acetyl-ADP-ribose deacetylase compare
RS_RS08810 -1.4 -1.9 peptidyl-prolyl cis-trans isomerase compare
RS_RS01705 -1.4 -0.6 PTS fructose transporter subunit IIA compare
RS_RS24280 -1.4 -1.9 alpha/beta hydrolase compare
RS_RS10440 -1.4 -0.4 RDD family protein compare
RS_RS07830 -1.4 -1.5 hypothetical protein compare
RS_RS22435 -1.4 -4.7 UDP-glucose 4-epimerase GalE compare
RS_RS15975 -1.4 -2.9 ShlB/FhaC/HecB family hemolysin secretion/activation protein compare
RS_RS21155 -1.4 -0.8 leucine-rich repeat domain-containing protein compare
RS_RS02870 -1.4 -0.9 fructose-bisphosphate aldolase class II compare
RS_RS25365 -1.3 -0.4 DNA cytosine methyltransferase compare
RS_RS09830 -1.3 -1.7 fumarate hydratase compare
RS_RS04485 -1.3 -1.4 DUF2059 domain-containing protein compare
RS_RS03385 -1.3 -0.7 hypothetical protein compare
RS_RS01440 -1.3 -0.4 hypothetical protein compare
RS_RS25240 -1.3 -1.0 hypothetical protein compare
RS_RS08390 -1.3 -0.9 hypothetical protein compare
RS_RS05275 -1.3 -0.9 DNA repair protein RecO compare
RS_RS00350 -1.3 -0.6 peptide deformylase compare
RS_RS00235 -1.3 -7.3 GTP-binding protein conserved
RS_RS15425 -1.3 -0.9 hypothetical protein compare
RS_RS08230 -1.3 -4.9 beta-ketoacyl-ACP reductase compare
RS_RS04695 -1.3 -1.5 DUF615 domain-containing protein compare
RS_RS20775 -1.3 -2.6 hypothetical protein compare
RS_RS08630 -1.2 -0.3 hypothetical protein compare
RS_RS17205 -1.2 -4.3 cold-shock protein compare
RS_RS14590 -1.2 -1.6 energy-dependent translational throttle protein EttA compare
RS_RS08685 -1.2 -1.1 arylesterase compare
RS_RS14340 -1.2 -2.1 ABC transporter permease compare
RS_RS08225 -1.2 -2.3 acetyl-CoA C-acetyltransferase compare
RS_RS25660 -1.2 -1.7 hypothetical protein compare
RS_RS00665 -1.2 -6.1 lauroyl acyltransferase compare
RS_RS03895 -1.2 -0.5 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA compare
RS_RS25625 -1.2 -0.8 hypothetical protein compare
RS_RS00130 -1.2 -4.3 methionine biosynthesis protein MetW compare
RS_RS20360 -1.2 -7.2 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase compare
RS_RS09975 -1.2 -2.4 tRNA pseudouridine(38-40) synthase TruA compare
RS_RS14655 -1.2 -0.6 ClpXP protease specificity-enhancing factor compare
RS_RS03100 -1.2 -0.3 recombination-associated protein RdgC compare
RS_RS05455 -1.2 -1.4 GlxA family transcriptional regulator compare
RS_RS20485 -1.2 -0.3 DUF2783 domain-containing protein compare
RS_RS09755 -1.2 -3.4 phage major capsid protein, P2 family compare
RS_RS11325 -1.1 -0.7 hypothetical protein compare
RS_RS22175 -1.1 -0.3 Hpt domain-containing protein compare
RS_RS08650 -1.1 -2.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
RS_RS02020 -1.1 -1.5 RNA polymerase sigma-54 factor compare
RS_RS05805 -1.1 -1.6 peptidyl-prolyl cis-trans isomerase compare
RS_RS20365 -1.1 -4.9 LysR family transcriptional regulator compare
RS_RS24670 -1.1 -3.3 hypothetical protein compare
RS_RS02765 -1.1 -0.7 regulatory protein RecX compare
RS_RS08440 -1.1 -1.3 hypothetical protein compare
RS_RS25875 -1.1 -0.3 hypothetical protein compare
RS_RS06055 -1.1 -3.4 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD compare
RS_RS03240 -1.1 -1.1 peptidase M48 compare
RS_RS22115 -1.1 -3.8 DNA-binding protein compare
RS_RS19130 -1.1 -0.9 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For carbon source Sodium pyruvate in Ralstonia solanacearum GMI1000

For carbon source Sodium pyruvate across organisms