Experiment set18S38 for Pseudomonas syringae pv. syringae B728a

Compare to:

MBOA 2.5 mM

200 most important genes:

  gene name fitness t score description  
Psyr_5088 -5.3 -9.6 regulatory protein, LuxR:Response regulator receiver compare
Psyr_5090 -3.8 -8.8 ABC transporter compare
Psyr_5091 -3.6 -17.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3013 -3.5 -2.4 magnesium chelatase subunit ChlD compare
Psyr_2900 -3.5 -6.6 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase compare
Psyr_2139 -2.4 -8.0 Kef-type potassium/proton antiporter, CPA2 family compare
Psyr_5089 -2.3 -4.9 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_1749 -2.1 -6.7 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_0857 -2.1 -3.3 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_1613 -2.0 -2.7 septum site-determining protein MinC compare
Psyr_1400 -2.0 -11.7 outer membrane porin compare
Psyr_0033 -2.0 -2.3 tryptophan synthase, alpha chain compare
Psyr_1762 -1.8 -9.0 conserved hypothetical protein compare
Psyr_3184 -1.8 -4.4 ATP-dependent Clp protease adaptor protein ClpS compare
Psyr_3675 -1.7 -2.6 adenosylcobinamide kinase compare
Psyr_5034 -1.7 -7.4 CBS:Protein of unknown function DUF21:Transporter-associated region compare
Psyr_3585 -1.6 -2.6 Sua5/YciO/YrdC/YwlC compare
Psyr_0976 -1.6 -2.2 Malate:quinone-oxidoreductase compare
Psyr_3290 -1.6 -3.4 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_5041 -1.6 -8.8 phosphate ABC transporter substrate-binding protein, PhoT family compare
Psyr_5040 -1.6 -10.7 Binding-protein-dependent transport systems inner membrane component compare
Psyr_5039 -1.6 -10.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2196 -1.5 -3.5 Urease accessory protein UreG compare
Psyr_3886 -1.5 -1.4 methionyl-tRNA synthetase compare
Psyr_3476 -1.5 -2.7 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_4887 -1.4 -6.8 Peptidase S41A, C-terminal protease compare
Psyr_5050 -1.4 -2.2 transcriptional regulator, LysR family compare
Psyr_0395 -1.4 -3.5 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_4843 -1.4 -4.3 NUDIX hydrolase compare
Psyr_3677 -1.4 -2.3 Aminotransferase, class I and II compare
Psyr_4566 -1.4 -4.4 Peptidase M23B compare
Psyr_4750 -1.4 -2.2 cell division ATP-binding protein FtsE compare
Psyr_0393 -1.3 -3.2 Protein of unknown function DUF971 compare
Psyr_4136 -1.3 -1.8 BolA-like protein compare
Psyr_1410 -1.3 -2.6 Holliday junction DNA helicase RuvB compare
Psyr_1910 -1.3 -1.5 VacJ-like lipoprotein compare
Psyr_4839 -1.3 -7.8 hypothetical protein compare
Psyr_2344 -1.3 -2.8 CDS compare
Psyr_4141 -1.3 -2.3 ABC transporter compare
Psyr_1946 -1.2 -2.9 diaminobutyrate aminotransferase apoenzyme compare
Psyr_2897 -1.2 -3.5 regulatory protein, LuxR:Response regulator receiver compare
Psyr_0293 -1.2 -5.8 Polyphosphate kinase compare
Psyr_4115 -1.2 -1.8 phosphoheptose isomerase compare
Psyr_0255 -1.2 -1.7 glutamate-cysteine ligase compare
Psyr_1109 -1.2 -5.8 6-phosphogluconate dehydratase compare
Psyr_4417 -1.2 -1.3 Ferredoxin--nitrite reductase compare
Psyr_3601 -1.2 -2.4 conserved hypothetical protein compare
Psyr_3282 -1.2 -3.0 transcriptional regulator, TetR family compare
Psyr_2471 -1.1 -2.0 hydroxymethylglutaryl-CoA lyase compare
Psyr_1408 -1.1 -1.3 Holliday junction endonuclease RuvC compare
Psyr_0849 -1.1 -3.5 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_2538 -1.1 -1.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0493 -1.1 -1.7 CheW-like protein compare
Psyr_1308 -1.1 -3.1 Protein-glutamate methylesterase compare
Psyr_0575 -1.1 -1.4 protease FtsH subunit HflC compare
Psyr_1407 -1.1 -2.5 Protein of unknown function DUF28 compare
Psyr_4481 -1.1 -3.6 outer membrane transport energization protein ExbB compare
Psyr_3110 -1.1 -2.5 Nucleoside 2-deoxyribosyltransferase compare
Psyr_4567 -1.1 -2.9 Protein of unknown function UPF0075 compare
Psyr_3287 -1.1 -1.5 DNA topoisomerase I compare
Psyr_4122 -1.1 -3.8 AFG1-like ATPase compare
Psyr_0519 -1.0 -5.7 Glutamate-ammonia-ligase adenylyltransferase compare
Psyr_0811 -1.0 -4.0 Integral membrane protein TerC compare
Psyr_4424 -1.0 -4.0 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_2253 -1.0 -1.8 Phosphonate metabolism compare
Psyr_4367 -1.0 -2.4 Iojap-related protein compare
Psyr_0497 -1.0 -2.7 LamB/YcsF compare
Psyr_5038 -1.0 -5.9 phosphate ABC transporter ATP-binding protein, PhoT family compare
Psyr_1069 -1.0 -2.2 molybdopterin synthase subunit MoaE compare
Psyr_0278 -1.0 -3.6 ABC-3 compare
Psyr_0524 -1.0 -1.1 Lipopolysaccharide kinase compare
Psyr_4019 -1.0 -2.5 H-NS family protein MvaT compare
Psyr_3674 -1.0 -1.5 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_5067 -1.0 -1.9 conserved hypothetical protein compare
Psyr_3701 -1.0 -1.8 thioredoxin, putative compare
Psyr_0291 -0.9 -3.1 DedA compare
Psyr_0557 -0.9 -4.8 phosphoserine phosphatase compare
Psyr_0153 -0.9 -2.0 conserved hypothetical protein compare
Psyr_4408 -0.9 -3.6 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_1544 -0.9 -3.5 SirA-like protein compare
Psyr_3672 -0.9 -1.6 cobalamin-5'-phosphate synthase compare
Psyr_0259 -0.9 -1.6 Osmolarity sensor protein envZ compare
Psyr_4158 -0.9 -4.0 conserved hypothetical protein compare
Psyr_4151 -0.9 -1.0 Phosphocarrier HPr protein compare
Psyr_3791 -0.9 -2.0 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_3258 -0.9 -1.8 conserved hypothetical protein compare
Psyr_3906 -0.9 -1.4 regulatory protein, DeoR compare
Psyr_0983 -0.9 -3.8 Protein of unknown function DUF159 compare
Psyr_1944 -0.9 -2.5 Thioesterase compare
Psyr_2071 -0.9 -1.1 outer membrane lipoprotein OprI compare
Psyr_0680 -0.9 -2.2 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_2256 -0.8 -2.5 ABC transporter compare
Psyr_0535 -0.8 -1.3 toluene tolerance protein, putative compare
Psyr_0017 -0.8 -2.0 16S rRNA m(5)C-967 methyltransferase compare
Psyr_3262 -0.8 -1.4 dnaK suppressor protein, putative compare
Psyr_0070 -0.8 -1.6 hypothetical protein compare
Psyr_1614 -0.8 -0.9 lipid A biosynthesis acyltransferase compare
Psyr_1270 -0.8 -1.5 conserved hypothetical protein compare
Psyr_1594 -0.8 -3.0 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_4159 -0.8 -3.8 RNAse G compare
Psyr_0137 -0.8 -1.5 outer membrane transport energization protein ExbD compare
Psyr_0914 -0.8 -4.9 Glycosyl transferase, group 1 compare
Psyr_4454 -0.8 -1.7 HupE/UreJ protein compare
Psyr_3281 -0.8 -1.3 Glycoside hydrolase, family 3, N-terminal compare
Psyr_4140 -0.8 -1.5 Protein of unknown function DUF140 compare
Psyr_1850 -0.8 -2.3 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase compare
Psyr_1198 -0.8 -2.2 type III secretion protein HrpF compare
Psyr_0060 -0.8 -2.5 Protein of unknown function DUF513 compare
Psyr_2342 -0.8 -3.3 CBS:Transporter-associated region:Integral membrane protein TerC compare
Psyr_3007 -0.7 -2.0 Protein of unknown function DUF1294 compare
Psyr_3676 -0.7 -1.7 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_4736 -0.7 -2.0 conserved hypothetical protein compare
Psyr_2469 -0.7 -2.8 Propionyl-CoA carboxylase compare
Psyr_0574 -0.7 -1.9 protease FtsH subunit HflK compare
Psyr_3680 -0.7 -1.7 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase compare
Psyr_2464 -0.7 -3.3 methionine synthase (B12-dependent) compare
Psyr_4116 -0.7 -0.8 Transport-associated protein compare
Psyr_1455 -0.7 -2.9 conserved hypothetical protein compare
Psyr_4842 -0.7 -2.6 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_4464 -0.7 -0.9 lipoprotein, putative compare
Psyr_3084 -0.7 -1.9 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_0571 -0.7 -0.7 tRNA isopentenyltransferase compare
Psyr_1670 -0.7 -1.6 Short-chain dehydrogenase/reductase SDR compare
Psyr_0215 -0.7 -3.4 Exodeoxyribonuclease III xth compare
Psyr_4138 -0.7 -1.8 Toluene tolerance compare
Psyr_0579 -0.7 -3.5 RNAse R compare
Psyr_4788 -0.7 -1.3 lipoprotein, putative compare
Psyr_0532 -0.7 -1.7 conserved hypothetical protein compare
Psyr_2979 -0.7 -3.6 NADPH-glutathione reductase compare
Psyr_3425 -0.6 -1.7 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_5029 -0.6 -1.5 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_2906 -0.6 -2.0 Pilus retraction protein PilT compare
Psyr_3299 -0.6 -2.8 two component transcriptional regulator, LuxR family compare
Psyr_0982 -0.6 -1.7 conserved hypothetical protein compare
Psyr_0919 -0.6 -4.3 Chromosome segregation ATPase-like protein compare
Psyr_0261 -0.6 -1.7 conserved hypothetical protein compare
Psyr_4837 -0.6 -4.6 Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase compare
Psyr_0212 -0.6 -2.0 Conserved hypothetical protein 255 compare
Psyr_0885 -0.6 -1.4 conserved hypothetical protein compare
Psyr_3947 -0.6 -1.0 Methyltransferase, putative compare
Psyr_5096 -0.6 -1.7 hypothetical protein compare
Psyr_3593 -0.6 -4.0 K+ transporter Trk compare
Psyr_3578 -0.6 -3.1 Major facilitator superfamily compare
Psyr_1947 -0.6 -1.7 MbtH-like protein compare
Psyr_4944 -0.6 -3.0 transcriptional regulator, LysR family compare
Psyr_0268 -0.6 -1.3 DSBA oxidoreductase compare
Psyr_2117 -0.6 -1.4 conserved hypothetical protein compare
Psyr_2975 -0.6 -2.4 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen compare
Psyr_2069 -0.6 -0.8 conserved hypothetical protein compare
Psyr_1418 -0.6 -0.9 Radical SAM compare
Psyr_3691 -0.6 -3.0 conserved hypothetical protein compare
Psyr_0053 -0.6 -2.2 conserved hypothetical protein compare
Psyr_4415 -0.6 -2.6 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase compare
Psyr_3198 -0.6 -0.8 NADH dehydrogenase subunit B compare
Psyr_RNA78 -0.6 -2.4 5S ribosomal RNA compare
Psyr_2347 -0.6 -1.6 hypothetical protein compare
Psyr_3146 -0.6 -1.1 general secretion pathway protein J, putative compare
Psyr_1160 -0.6 -4.2 Uncharacterized protein conserved in bacteria-like protein compare
Psyr_3179 -0.6 -0.9 DNA translocase FtsK compare
Psyr_3637 -0.6 -3.9 Glycosyl transferase, family 4 compare
Psyr_4802 -0.6 -1.8 Secretion protein HlyD compare
Psyr_4730 -0.6 -1.3 FecR protein compare
Psyr_3889 -0.6 -1.3 conserved hypothetical protein compare
Psyr_2588 -0.6 -1.9 HpcH/HpaI aldolase compare
Psyr_1528 -0.6 -1.7 Arc-like DNA binding protein compare
Psyr_4942 -0.6 -1.8 HAD-superfamily hydrolase, subfamily IA, variant 3 compare
Psyr_3900 -0.6 -1.8 conserved hypothetical protein compare
Psyr_4066 -0.6 -2.3 conserved hypothetical protein compare
Psyr_0920 -0.6 -4.6 Glycosyl transferase, group 1 compare
Psyr_2915 -0.6 -1.6 transcriptional regulator, AraC family with amidase-like domain protein compare
Psyr_3130 -0.6 -2.3 Secretion protein HlyD compare
Psyr_0947 -0.6 -2.4 TPR repeat protein:TPR repeat protein compare
Psyr_0704 -0.5 -3.1 glutamate 5-kinase compare
Psyr_4733 -0.5 -2.6 betaine aldehyde dehydrogenase compare
Psyr_2415 -0.5 -1.8 hypothetical protein compare
Psyr_2356 -0.5 -2.3 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_2933 -0.5 -1.7 transcriptional regulator, TetR family compare
Psyr_0016 -0.5 -3.3 TrkA-N:TrkA-C compare
Psyr_4077 -0.5 -1.9 Methylated-DNA-[protein]-cysteine S-methyltransferase compare
Psyr_0038 -0.5 -2.0 Protein of unknown function DUF1161 compare
Psyr_1033 -0.5 -1.7 YebG compare
Psyr_1234 -0.5 -2.1 RNA methyltransferase TrmH, group 1 compare
Psyr_0275 -0.5 -2.8 Periplasmic solute binding protein compare
Psyr_2604 -0.5 -2.8 conserved hypothetical protein; putative membrane protein compare
Psyr_2327 -0.5 -1.5 GTP cyclohydrolase subunit MoaA compare
Psyr_3967 -0.5 -1.5 membrane protein TctB, putative compare
Psyr_2874 -0.5 -2.2 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_1856 -0.5 -2.3 acireductone dioxygenase apoprotein compare
Psyr_2092 -0.5 -1.2 Protein of unknown function 1935 compare
Psyr_0179 -0.5 -1.3 Protein of unknown function DUF1289 compare
Psyr_4100 -0.5 -2.1 D-alanine--D-alanine ligase compare
Psyr_4160 -0.5 -2.3 Maf-like protein compare
Psyr_5053 -0.5 -2.2 asparaginase compare
Psyr_1268 -0.5 -1.0 extracellular solute-binding protein, family 3:SLT compare
Psyr_4335 -0.5 -1.0 transcriptional regulator, AsnC family compare
Psyr_1915 -0.5 -2.1 Peptidase M20:Peptidase M20 compare
Psyr_2446 -0.5 -2.2 MCP methyltransferase, CheR-type compare
Psyr_5130 -0.5 -2.6 chromosome segregation ATPase compare
Psyr_4420 -0.5 -1.6 precorrin-6A reductase compare
Psyr_4143 -0.5 -1.1 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress 6-methoxy-2(3H)-benzoxazolone across organisms