Experiment set18S37 for Pseudomonas syringae pv. syringae B728a

Compare to:

MBOA 2.5 mM

200 most detrimental genes:

  gene name fitness t score description  
Psyr_1668 +1.4 5.3 amidophosphoribosyltransferase compare
Psyr_0444 +1.3 2.5 Malonate decarboxylase delta subunit compare
Psyr_4008 +1.3 11.3 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_3567 +1.2 4.3 L-arginine ABC transporter ATP-binding protein / L-ornithine ABC transporter ATP-binding protein compare
Psyr_4007 +1.1 7.8 Secretion protein HlyD compare
Psyr_2386 +1.1 2.5 hypothetical protein compare
Psyr_0726 +1.0 3.8 ribosomal large subunit pseudouridine synthase D compare
Psyr_1021 +1.0 3.9 Short-chain dehydrogenase/reductase SDR compare
Psyr_2752 +0.9 3.7 conserved hypothetical protein compare
Psyr_3600 +0.9 2.8 transcriptional regulator, LysR family compare
Psyr_4874 +0.9 1.3 ABC transporter compare
Psyr_3739 +0.9 2.8 conserved hypothetical protein compare
Psyr_4491 +0.9 2.1 Deoxyribose-phosphate aldolase compare
Psyr_3610 +0.9 2.2 GAF compare
Psyr_2562 +0.8 2.8 hypothetical protein compare
Psyr_1024 +0.8 1.2 Flavodoxin/nitric oxide synthase compare
Psyr_4582 +0.8 1.5 hypothetical protein compare
Psyr_2406 +0.8 2.4 Flavin reductase-like protein compare
Psyr_4932 +0.8 5.8 agmatine deiminase compare
Psyr_0263 +0.8 2.7 Two-component response regulator AlgB compare
Psyr_1019 +0.8 4.3 Dihydroneopterin aldolase compare
Psyr_4009 +0.7 4.1 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3776 +0.7 1.9 Cytosine deaminase compare
Psyr_4380 +0.7 1.4 translation initiation factor 1 (eIF-1/SUI1) compare
Psyr_3296 +0.7 2.9 MOSC:MOSC, N-terminal beta barrel compare
Psyr_0453 +0.7 3.9 16S rRNA m(3)U-1498 methyltransferase compare
Psyr_3458 +0.7 0.9 Flagellar hook-basal body complex protein FliE compare
Psyr_1212 +0.7 2.0 type III secretion protein HrpO compare
Psyr_2984 +0.7 2.7 conserved hypothetical protein compare
Psyr_3934 +0.7 1.2 Short-chain dehydrogenase/reductase SDR compare
Psyr_1662 +0.7 3.8 tRNA pseudouridine synthase compare
Psyr_1269 +0.7 1.5 phosphoribosylformylglycinamidine synthase compare
Psyr_3878 +0.7 4.1 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_3874 +0.7 4.4 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_3896 +0.6 2.0 BFD-like [2Fe-2S]-binding region compare
Psyr_4637 +0.6 3.7 acyl-phosphate glycerol-3-phosphate acyltransferase compare
Psyr_0541 +0.6 1.3 Small multidrug resistance protein compare
Psyr_0735 +0.6 1.5 Peptidase S24, S26A and S26B compare
Psyr_4920 +0.6 1.5 conserved hypothetical bacteriophage protein compare
Psyr_4092 +0.6 3.0 Glutathione S-transferase, N-terminal compare
Psyr_3050 +0.6 3.3 Aldo/keto reductase compare
Psyr_4933 +0.6 3.5 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_0445 +0.6 2.0 malonate decarboxylase, beta subunit compare
Psyr_3837 +0.6 1.9 conserved hypothetical protein compare
Psyr_1190 +0.6 2.4 type III transcriptional regulator HrpR compare
Psyr_4407 +0.6 1.3 phosphoribosylamine--glycine ligase compare
Psyr_3812 +0.6 2.3 CDS compare
Psyr_0985 +0.6 3.0 Protein of unknown function UPF0016 compare
Psyr_3462 +0.6 1.5 conserved hypothetical protein compare
Psyr_4068 +0.6 1.7 conserved hypothetical protein compare
Psyr_1802 +0.6 1.2 transcriptional regulator, AsnC family compare
Psyr_3130 +0.6 2.8 Secretion protein HlyD compare
Psyr_2531 +0.6 2.1 transcriptional regulator, LysR family compare
Psyr_4693 +0.6 3.2 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4835 +0.6 3.0 imidazolonepropionase compare
Psyr_0411 +0.6 5.0 glutamate synthase (NADPH) large subunit compare
Psyr_1196 +0.6 1.7 type III secretion protein HrpD compare
Psyr_2557 +0.6 1.0 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein compare
Psyr_3423 +0.6 4.5 coproporphyrinogen III oxidase, anaerobic compare
Psyr_4860 +0.6 0.9 Integrase, catalytic region compare
Psyr_2620 +0.5 1.6 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_1587 +0.5 2.0 Bile acid:sodium symporter compare
Psyr_0550 +0.5 2.3 Protein of unknown function UPF0227 compare
Psyr_5029 +0.5 1.5 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_4130 +0.5 4.0 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF compare
Psyr_3305 +0.5 2.3 Glycosyl transferase, group 1 compare
Psyr_2067 +0.5 1.2 ABC transporter compare
Psyr_4381 +0.5 4.7 arginine decarboxylase compare
Psyr_3852 +0.5 2.2 lipoprotein SlyB, putative compare
Psyr_0270 +0.5 2.1 DNA polymerase I compare
Psyr_4254 +0.5 1.5 conserved hypothetical protein compare
Psyr_1507 +0.5 1.8 hypothetical protein compare
Psyr_0149 +0.5 3.1 succinate semialdehyde dehydrogenase compare
Psyr_0295 +0.5 1.5 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_3777 +0.5 2.2 conserved hypothetical protein compare
Psyr_3007 +0.5 1.9 Protein of unknown function DUF1294 compare
Psyr_4259 +0.5 4.2 ATP-dependent protease, putative compare
Psyr_1968 +0.5 1.5 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3876 +0.5 4.4 amino acid ABC transporter membrane protein 2, PAAT family compare
Psyr_0580 +0.5 1.2 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_4388 +0.5 2.1 Response regulator receiver compare
Psyr_4015 +0.5 1.0 conserved domain protein compare
Psyr_0864 +0.5 1.7 Protein of unknown function DUF393 compare
Psyr_1334 +0.5 1.2 Cysteine desulfuration protein SufE compare
Psyr_2324 +0.5 2.6 conserved hypothetical protein compare
Psyr_4908 +0.5 2.2 conserved hypothetical protein compare
Psyr_4881 +0.5 1.3 RNA methyltransferase TrmH, group 2 compare
Psyr_1097 +0.5 0.8 glycine cleavage system H protein compare
Psyr_3116 +0.5 2.2 transcriptional regulator, CdaR family compare
Psyr_3570 +0.5 2.5 L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein compare
Psyr_3946 +0.5 1.7 Proteobacterial methyltransferase compare
Psyr_3397 +0.5 1.9 transcriptional regulator, LysR family compare
Psyr_1610 +0.5 2.3 ribosomal large subunit pseudouridine synthase A compare
Psyr_0069 +0.5 2.9 Na+/Pi-cotransporter:Na/Pi cotransporter II-related protein compare
Psyr_1645 +0.5 1.6 phosphate:acyl-[acyl carrier protein] acyltransferase compare
Psyr_3286 +0.5 3.2 conserved hypothetical protein compare
Psyr_3952 +0.5 1.8 conserved hypothetical protein compare
Psyr_2039 +0.5 1.1 Fimbrial protein compare
Psyr_3958 +0.5 3.0 RNA polymerase, sigma-24 subunit, RpoE compare
Psyr_4093 +0.5 1.7 glutamate N-acetyltransferase compare
Psyr_3905 +0.5 2.7 glycerol kinase compare
Psyr_RNA28 +0.5 1.1 tRNA-Val compare
Psyr_4112 +0.5 3.0 Protein of unknown function UPF0011 compare
Psyr_2278 +0.5 2.0 luciferase compare
Psyr_4285 +0.5 1.2 Ferredoxin:[2Fe-2S]-binding protein compare
Psyr_3875 +0.5 3.2 amino acid ABC transporter membrane protein 1, PAAT family compare
Psyr_3877 +0.5 2.4 Succinylglutamate desuccinylase/aspartoacylase compare
Psyr_3842 +0.5 2.0 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_4995 +0.4 1.9 RHS protein compare
Psyr_2776 +0.4 3.0 hypothetical protein compare
Psyr_0566 +0.4 3.3 4Fe-4S cluster binding protein compare
Psyr_1875 +0.4 1.2 Enoyl-CoA hydratase/isomerase compare
Psyr_3862 +0.4 1.6 conserved hypothetical protein compare
Psyr_1099 +0.4 2.4 Response regulator receiver compare
Psyr_2481 +0.4 1.6 thiol peroxidase (atypical 2-Cys peroxiredoxin) compare
Psyr_4256 +0.4 1.6 conserved hypothetical protein compare
Psyr_2541 +0.4 2.1 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_0791 +0.4 1.2 MOSC compare
Psyr_2211 +0.4 1.8 monooxygenase, NtaA/SnaA/SoxA family compare
Psyr_1388 +0.4 2.1 Protein of unknown function UPF0066 compare
Psyr_1717 +0.4 1.7 TPR repeat:von Willebrand factor, type A compare
Psyr_2221 +0.4 1.1 sarcosine oxidase, gamma subunit compare
Psyr_0406 +0.4 1.8 Pilus assembly protein, PilQ compare
Psyr_2787 +0.4 0.9 hypothetical protein compare
Psyr_3701 +0.4 1.0 thioredoxin, putative compare
Psyr_3695 +0.4 3.2 RelA/SpoT protein compare
Psyr_3779 +0.4 1.5 GCN5-related N-acetyltransferase compare
Psyr_0243 +0.4 2.0 cyclic nucleotide-binding protein compare
Psyr_1193 +0.4 0.8 type III helper protein HrpZ1 compare
Psyr_2733 +0.4 1.1 Short-chain dehydrogenase/reductase SDR compare
Psyr_4001 +0.4 1.1 conserved domain protein compare
Psyr_1335 +0.4 2.0 Aminotransferase, class V compare
Psyr_0449 +0.4 1.6 Malonate transporter MadL subunit compare
Psyr_4752 +0.4 2.1 Insulinase-like:Peptidase M16, C-terminal compare
Psyr_2820 +0.4 1.5 RecT protein compare
Psyr_3103 +0.4 1.6 phosphate ABC transporter ATP-binding protein, PhoT family compare
Psyr_1126 +0.4 1.5 Heavy metal sensor kinase compare
Psyr_3592 +0.4 2.2 Nitroreductase compare
Psyr_0533 +0.4 1.5 conserved hypothetical protein compare
Psyr_0033 +0.4 1.1 tryptophan synthase, alpha chain compare
Psyr_2808 +0.4 1.3 hypothetical protein compare
Psyr_3569 +0.4 3.0 L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein compare
Psyr_3998 +0.4 2.1 Heat shock protein DnaJ, N-terminal compare
Psyr_0986 +0.4 1.5 16S rRNA m(2)G 1207 methyltransferase compare
Psyr_2850 +0.4 1.4 hypothetical protein compare
Psyr_1719 +0.4 1.0 conserved hypothetical protein compare
Psyr_3359 +0.4 1.6 Phenazine biosynthesis PhzC/PhzF protein compare
Psyr_2965 +0.4 2.3 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_4294 +0.4 1.2 Histone deacetylase family protein compare
Psyr_0858 +0.4 1.5 conserved hypothetical protein compare
Psyr_0446 +0.4 1.3 Malonate decarboxylase gamma subunit compare
Psyr_0160 +0.4 2.0 GCN5-related N-acetyltransferase compare
Psyr_4911 +0.4 2.1 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_2086 +0.4 2.5 2-methylcitrate synthase compare
Psyr_3596 +0.4 1.3 Selenoprotein W-related protein compare
Psyr_4658 +0.4 0.9 CDS compare
Psyr_1972 +0.4 1.1 conserved hypothetical protein compare
Psyr_3783 +0.4 1.8 conserved hypothetical protein compare
Psyr_0376 +0.4 1.2 D-tyrosyl-tRNA(Tyr) deacylase compare
Psyr_0822 +0.4 0.4 1-phosphofructokinase compare
Psyr_0955 +0.4 2.5 membrane protein, putative compare
Psyr_4671 +0.4 1.4 coenzyme PQQ synthesis protein B compare
Psyr_0246 +0.4 2.4 aminomethyltransferase compare
Psyr_2312 +0.4 0.8 Protein of unknown function DUF24 compare
Psyr_4447 +0.4 1.7 hypothetical protein compare
Psyr_1333 +0.4 1.4 UBA/THIF-type NAD/FAD binding fold protein compare
Psyr_3105 +0.4 1.6 phosphate ABC transporter membrane protein 1, PhoT family compare
Psyr_1846 +0.4 1.8 hypothetical protein compare
Psyr_0173 +0.4 2.3 SSU ribosomal protein S6P modification protein compare
Psyr_5064 +0.4 1.3 transcriptional regulator, RpiR family compare
Psyr_4657 +0.4 1.8 CDS compare
Psyr_0412 +0.4 2.6 glutamate synthase (NADPH) small subunit compare
Psyr_1350 +0.4 1.4 site-2 protease, Metallo peptidase, MEROPS family M50B compare
Psyr_1716 +0.4 2.0 conserved hypothetical protein compare
Psyr_1650 +0.4 0.9 aminodeoxychorismate lyase apoprotein compare
Psyr_4043 +0.4 1.0 hypothetical protein compare
Psyr_3151 +0.4 1.9 type II secretion system protein E (GspE) compare
Psyr_0769 +0.4 1.9 conserved hypothetical membrane-anchored protein compare
Psyr_3790 +0.4 1.4 conserved hypothetical protein compare
Psyr_3889 +0.4 1.3 conserved hypothetical protein compare
Psyr_1148 +0.4 1.7 branched chain amino acid aminotransferase apoenzyme compare
Psyr_1245 +0.4 1.6 23S rRNA m(2)A-2503 methyltransferase compare
Psyr_0674 +0.4 1.2 Protein of unknown function UPF0029 compare
Psyr_2115 +0.4 1.1 Response regulator receiver compare
Psyr_2195 +0.3 1.6 Urease accessory protein UreD compare
Psyr_0546 +0.3 1.6 lipoprotein, putative compare
Psyr_4806 +0.3 2.1 hypothetical protein compare
Psyr_4989 +0.3 1.3 hypothetical protein compare
Psyr_2450 +0.3 1.8 PAS compare
Psyr_3174 +0.3 1.5 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase compare
Psyr_4067 +0.3 2.3 Lipopolysaccharide kinase compare
Psyr_1859 +0.3 1.4 conserved hypothetical protein compare
Psyr_0555 +0.3 1.6 Protein of unknown function DUF330 compare
Psyr_2060 +0.3 1.2 Sec-independent protein translocase TatD compare
Psyr_3473 +0.3 1.3 Flagellar P-ring protein compare
Psyr_3854 +0.3 0.5 OmpA/MotB compare
Psyr_2668 +0.3 1.3 Helix-turn-helix, Fis-type compare
Psyr_1146 +0.3 2.4 Glycosyl transferase, family 2 compare
Psyr_3115 +0.3 1.5 Glycerate kinase compare
Psyr_0694 +0.3 1.4 ABC transporter compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress 6-methoxy-2(3H)-benzoxazolone across organisms