Experiment set18S36 for Pseudomonas syringae pv. syringae B728a

Compare to:

MBOA 1.2 mM

200 most important genes:

  gene name fitness t score description  
Psyr_5088 -5.2 -10.6 regulatory protein, LuxR:Response regulator receiver compare
Psyr_5089 -3.7 -7.7 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_5090 -3.5 -9.6 ABC transporter compare
Psyr_5091 -3.4 -16.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3698 -2.6 -2.5 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_1613 -2.4 -3.2 septum site-determining protein MinC compare
Psyr_1749 -2.2 -7.8 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_2139 -2.2 -7.1 Kef-type potassium/proton antiporter, CPA2 family compare
Psyr_1400 -1.9 -12.0 outer membrane porin compare
Psyr_4754 -1.9 -1.2 16S rRNA m(2)G-966 methyltransferase compare
Psyr_5040 -1.8 -12.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1762 -1.8 -9.1 conserved hypothetical protein compare
Psyr_4843 -1.8 -5.2 NUDIX hydrolase compare
Psyr_3791 -1.7 -3.3 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_5034 -1.7 -9.0 CBS:Protein of unknown function DUF21:Transporter-associated region compare
Psyr_5039 -1.7 -11.0 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4136 -1.5 -2.3 BolA-like protein compare
Psyr_3179 -1.5 -2.3 DNA translocase FtsK compare
Psyr_5041 -1.5 -9.0 phosphate ABC transporter substrate-binding protein, PhoT family compare
Psyr_0976 -1.4 -2.7 Malate:quinone-oxidoreductase compare
Psyr_4566 -1.3 -5.0 Peptidase M23B compare
Psyr_4887 -1.3 -6.6 Peptidase S41A, C-terminal protease compare
Psyr_0528 -1.3 -1.9 Carbamoyltransferase compare
Psyr_0293 -1.3 -7.7 Polyphosphate kinase compare
Psyr_3014 -1.3 -2.6 protoporphyrin IX magnesium-chelatase compare
Psyr_4839 -1.3 -7.4 hypothetical protein compare
Psyr_3701 -1.2 -2.0 thioredoxin, putative compare
Psyr_3020 -1.2 -1.7 precorrin-4 C11-methyltransferase compare
Psyr_2256 -1.2 -2.1 ABC transporter compare
Psyr_2200 -1.2 -3.1 UreE urease accessory, N-terminal compare
Psyr_4464 -1.1 -1.5 lipoprotein, putative compare
Psyr_5038 -1.1 -6.9 phosphate ABC transporter ATP-binding protein, PhoT family compare
Psyr_4141 -1.1 -2.6 ABC transporter compare
Psyr_4682 -1.1 -1.2 conserved hypothetical protein compare
Psyr_1688 -1.1 -2.2 Protein of unknown function DUF1315 compare
Psyr_3678 -1.1 -3.8 adenosylcobinamide-phosphate synthase compare
Psyr_0215 -1.0 -4.8 Exodeoxyribonuclease III xth compare
Psyr_4116 -1.0 -1.5 Transport-associated protein compare
Psyr_3955 -1.0 -3.1 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF compare
Psyr_4842 -1.0 -4.7 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_1109 -1.0 -4.6 6-phosphogluconate dehydratase compare
Psyr_0811 -1.0 -4.3 Integral membrane protein TerC compare
Psyr_1907 -1.0 -0.6 GTP cyclohydrolase I compare
Psyr_2900 -1.0 -3.8 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase compare
Psyr_1378 -0.9 -1.7 RecA protein compare
Psyr_0574 -0.9 -2.3 protease FtsH subunit HflK compare
Psyr_0524 -0.9 -1.3 Lipopolysaccharide kinase compare
Psyr_0278 -0.9 -3.7 ABC-3 compare
Psyr_4567 -0.9 -2.7 Protein of unknown function UPF0075 compare
Psyr_0579 -0.9 -4.8 RNAse R compare
Psyr_3681 -0.9 -1.3 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_1408 -0.9 -1.5 Holliday junction endonuclease RuvC compare
Psyr_3296 -0.9 -3.0 MOSC:MOSC, N-terminal beta barrel compare
Psyr_4158 -0.9 -4.3 conserved hypothetical protein compare
Psyr_4138 -0.9 -2.5 Toluene tolerance compare
Psyr_1317 -0.9 -1.2 conserved hypothetical protein compare
Psyr_3282 -0.9 -3.6 transcriptional regulator, TetR family compare
Psyr_4087 -0.9 -1.6 Protein of unknown function DUF520 compare
Psyr_1872 -0.9 -2.2 conserved hypothetical protein compare
Psyr_0394 -0.9 -3.2 Heat shock protein HslU compare
Psyr_5067 -0.9 -1.5 conserved hypothetical protein compare
Psyr_0395 -0.8 -2.7 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_4001 -0.8 -3.0 conserved domain protein compare
Psyr_0565 -0.8 -3.6 Protein of unknown function UPF0126 compare
Psyr_0436 -0.8 -1.7 Phosphopantetheine-binding protein compare
Psyr_2897 -0.8 -2.8 regulatory protein, LuxR:Response regulator receiver compare
Psyr_4476 -0.8 -3.0 dTDP-4-dehydrorhamnose reductase compare
Psyr_2253 -0.8 -2.0 Phosphonate metabolism compare
Psyr_0573 -0.8 -3.4 GTP-binding protein HflX compare
Psyr_3597 -0.8 -1.1 ABC transporter compare
Psyr_0214 -0.8 -2.1 conserved hypothetical protein compare
Psyr_3672 -0.8 -1.1 cobalamin-5'-phosphate synthase compare
Psyr_2117 -0.8 -2.1 conserved hypothetical protein compare
Psyr_4415 -0.8 -3.6 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase compare
Psyr_0849 -0.8 -3.4 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_1850 -0.8 -2.5 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase compare
Psyr_4100 -0.8 -3.6 D-alanine--D-alanine ligase compare
Psyr_2467 -0.7 -2.7 3-methylcrotonoyl-CoA carboxylase, alpha subunit compare
Psyr_4115 -0.7 -1.3 phosphoheptose isomerase compare
Psyr_1594 -0.7 -3.3 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_2059 -0.7 -2.5 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_3013 -0.7 -0.8 magnesium chelatase subunit ChlD compare
Psyr_0261 -0.7 -3.3 conserved hypothetical protein compare
Psyr_4408 -0.7 -3.4 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_4278 -0.7 -1.3 regulatory protein, LuxR compare
Psyr_3476 -0.7 -2.4 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_0275 -0.7 -3.6 Periplasmic solute binding protein compare
Psyr_0291 -0.7 -2.7 DedA compare
Psyr_4845 -0.7 -1.8 conserved hypothetical protein compare
Psyr_0364 -0.7 -2.8 sodium/proton antiporter, NhaA family compare
Psyr_4855 -0.7 -3.5 conserved hypothetical protein compare
Psyr_4150 -0.7 -3.1 Uncharacterized P-loop ATPase protein UPF0042 compare
Psyr_4941 -0.7 -2.6 NUDIX hydrolase compare
Psyr_5135 -0.7 -0.9 Protein of unknown function DUF37 compare
Psyr_1410 -0.7 -1.8 Holliday junction DNA helicase RuvB compare
Psyr_5050 -0.7 -2.2 transcriptional regulator, LysR family compare
Psyr_1751 -0.7 -2.2 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_2566 -0.7 -2.7 dihydroxyacetone kinase DhaK subunit compare
Psyr_3637 -0.7 -4.3 Glycosyl transferase, family 4 compare
Psyr_0393 -0.7 -1.7 Protein of unknown function DUF971 compare
Psyr_4333 -0.7 -2.7 Cation efflux protein compare
Psyr_4420 -0.6 -2.2 precorrin-6A reductase compare
Psyr_1544 -0.6 -2.7 SirA-like protein compare
Psyr_0059 -0.6 -4.3 HemY, N-terminal:HemY, N-terminal:HemY, N-terminal compare
Psyr_3290 -0.6 -2.2 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_1419 -0.6 -1.3 preQ(0) biosynthesis protein QueC compare
Psyr_4159 -0.6 -2.9 RNAse G compare
Psyr_0060 -0.6 -2.0 Protein of unknown function DUF513 compare
Psyr_3954 -0.6 -2.0 GTP-binding protein LepA compare
Psyr_2933 -0.6 -1.8 transcriptional regulator, TetR family compare
Psyr_3450 -0.6 -2.2 Hpt compare
Psyr_4788 -0.6 -1.3 lipoprotein, putative compare
Psyr_4122 -0.6 -2.1 AFG1-like ATPase compare
Psyr_3183 -0.6 -3.1 ATP-dependent Clp protease ATP-binding subunit ClpA compare
Psyr_2469 -0.6 -3.1 Propionyl-CoA carboxylase compare
Psyr_4350 -0.6 -1.5 Protein of unknown function DUF218 compare
Psyr_5071 -0.6 -2.1 conserved hypothetical protein compare
Psyr_2462 -0.6 -2.9 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_0017 -0.6 -1.4 16S rRNA m(5)C-967 methyltransferase compare
Psyr_0268 -0.6 -1.2 DSBA oxidoreductase compare
Psyr_0167 -0.6 -2.3 hypothetical protein compare
Psyr_0491 -0.6 -2.0 chemotaxis sensory transducer compare
Psyr_3425 -0.6 -1.4 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_4808 -0.6 -1.2 conserved hypothetical protein compare
Psyr_0366 -0.6 -3.0 transcriptional regulator, GntR family compare
Psyr_1867 -0.6 -3.5 conserved hypothetical protein compare
Psyr_0497 -0.6 -1.4 LamB/YcsF compare
Psyr_3906 -0.6 -1.0 regulatory protein, DeoR compare
Psyr_3028 -0.6 -1.3 Protein of unknown function DUF28 compare
Psyr_2134 -0.6 -1.0 protein of unknown function DUF903 compare
Psyr_3324 -0.6 -1.9 transcriptional regulator, TetR family compare
Psyr_2980 -0.6 -1.4 UDP-glucose pyrophosphorylase compare
Psyr_4161 -0.6 -1.2 Rod shape-determining protein MreD compare
Psyr_3636 -0.6 -4.0 Polysaccharide biosynthesis protein CapD compare
Psyr_2851 -0.5 -1.0 conserved hypothetical protein compare
Psyr_1402 -0.5 -2.0 SlyX compare
Psyr_0479 -0.5 -1.8 NLP/P60 compare
Psyr_0318 -0.5 -2.2 cell division protein ZapA compare
Psyr_2447 -0.5 -3.4 CheB methylesterase compare
Psyr_0137 -0.5 -1.2 outer membrane transport energization protein ExbD compare
Psyr_4417 -0.5 -0.6 Ferredoxin--nitrite reductase compare
Psyr_0916 -0.5 -3.2 GDP-mannose 4,6-dehydratase compare
Psyr_3146 -0.5 -1.3 general secretion pathway protein J, putative compare
Psyr_5132 -0.5 -0.6 Glucose-inhibited division protein A subfamily compare
Psyr_4733 -0.5 -2.8 betaine aldehyde dehydrogenase compare
Psyr_2347 -0.5 -1.3 hypothetical protein compare
Psyr_2464 -0.5 -2.4 methionine synthase (B12-dependent) compare
Psyr_4460 -0.5 -0.8 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_0276 -0.5 -2.1 zinc uptake regulation protein, putative compare
Psyr_2873 -0.5 -2.2 Acyl-CoA dehydrogenase, C-terminal compare
Psyr_2847 -0.5 -1.8 hypothetical protein compare
Psyr_1401 -0.5 -2.5 Histidine triad (HIT) protein compare
Psyr_1596 -0.5 -1.7 Helix-turn-helix motif protein compare
Psyr_0792 -0.5 -2.0 conserved hypothetical protein compare
Psyr_0165 -0.5 -1.7 GCN5-related N-acetyltransferase compare
Psyr_5131 -0.5 -1.8 16S rRNA m(7)G-527 methyltransferase compare
Psyr_2822 -0.5 -1.5 hypothetical protein compare
Psyr_4300 -0.5 -1.8 DNA polymerase III, epsilon subunit compare
Psyr_1160 -0.5 -3.7 Uncharacterized protein conserved in bacteria-like protein compare
Psyr_0232 -0.5 -3.3 gamma-glutamylputrescine oxidase compare
Psyr_2105 -0.5 -1.9 conserved hypothetical protein compare
Psyr_4696 -0.5 -2.6 transcriptional regulator, LacI family compare
Psyr_3202 -0.5 -0.3 NADH dehydrogenase subunit G compare
Psyr_3676 -0.5 -1.1 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_3525 -0.5 -1.2 3-hydroxyisobutyrate dehydrogenase compare
Psyr_1554 -0.5 -2.2 hypothetical protein compare
Psyr_3835 -0.5 -1.1 hypothetical protein compare
Psyr_2628 -0.5 -2.7 ABC transporter compare
Psyr_0439 -0.5 -2.0 conserved hypothetical protein compare
Psyr_2231 -0.5 -2.0 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_4157 -0.5 -2.4 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_1120 -0.5 -3.2 glucose-6-phosphate 1-dehydrogenase compare
Psyr_2201 -0.5 -2.2 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family compare
Psyr_2226 -0.5 -1.7 formyltetrahydrofolate deformylase compare
Psyr_0201 -0.5 -2.0 ATP-dependent DNA helicase RecG compare
Psyr_0920 -0.5 -4.0 Glycosyl transferase, group 1 compare
Psyr_1895 -0.5 -1.1 conserved hypothetical protein compare
Psyr_2327 -0.5 -2.0 GTP cyclohydrolase subunit MoaA compare
Psyr_0692 -0.5 -2.9 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2030 -0.5 -1.4 Calcium-binding EF-hand compare
Psyr_2397 -0.5 -1.9 transcriptional regulator, LysR family compare
Psyr_3446 -0.5 -1.2 Surface presentation of antigens (SPOA) protein compare
Psyr_4663 -0.5 -2.3 hypothetical protein compare
Psyr_1856 -0.5 -1.9 acireductone dioxygenase apoprotein compare
Psyr_4605 -0.5 -2.0 transcriptional regulator PrtN, putative compare
Psyr_2906 -0.5 -1.3 Pilus retraction protein PilT compare
Psyr_0519 -0.5 -2.5 Glutamate-ammonia-ligase adenylyltransferase compare
Psyr_0571 -0.5 -0.5 tRNA isopentenyltransferase compare
Psyr_3321 -0.4 -1.6 transcriptional regulator, LysR family compare
Psyr_3934 -0.4 -1.1 Short-chain dehydrogenase/reductase SDR compare
Psyr_3181 -0.4 -1.6 Arginyltransferase compare
Psyr_2765 -0.4 -1.0 conserved domain protein compare
Psyr_4902 -0.4 -1.0 Protein of unknown function DUF495 compare
Psyr_4627 -0.4 -0.3 dimethyladenosine transferase compare
Psyr_0033 -0.4 -1.0 tryptophan synthase, alpha chain compare
Psyr_0255 -0.4 -1.0 glutamate-cysteine ligase compare
Psyr_2446 -0.4 -2.1 MCP methyltransferase, CheR-type compare
Psyr_2538 -0.4 -1.7 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0549 -0.4 -1.3 Metallophosphoesterase compare
Psyr_4455 -0.4 -1.6 conserved hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress 6-methoxy-2(3H)-benzoxazolone across organisms