Experiment set18S35 for Pseudomonas syringae pv. syringae B728a

Compare to:

MBOA 1.2 mM

200 most important genes:

  gene name fitness t score description  
Psyr_5090 -4.2 -11.3 ABC transporter compare
Psyr_5088 -4.0 -10.8 regulatory protein, LuxR:Response regulator receiver compare
Psyr_5091 -3.6 -18.0 Binding-protein-dependent transport systems inner membrane component compare
Psyr_5089 -3.3 -9.7 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_2139 -2.5 -7.3 Kef-type potassium/proton antiporter, CPA2 family compare
Psyr_2900 -2.3 -6.3 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase compare
Psyr_1762 -2.2 -10.4 conserved hypothetical protein compare
Psyr_0857 -2.1 -3.5 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_1400 -2.0 -11.8 outer membrane porin compare
Psyr_3425 -2.0 -2.9 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_3698 -1.9 -2.8 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_5040 -1.8 -12.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1749 -1.7 -6.4 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_3676 -1.7 -3.0 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_0976 -1.6 -2.6 Malate:quinone-oxidoreductase compare
Psyr_5041 -1.6 -9.0 phosphate ABC transporter substrate-binding protein, PhoT family compare
Psyr_1613 -1.5 -2.6 septum site-determining protein MinC compare
Psyr_5039 -1.5 -10.1 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4887 -1.5 -6.8 Peptidase S41A, C-terminal protease compare
Psyr_4750 -1.5 -2.7 cell division ATP-binding protein FtsE compare
Psyr_1410 -1.4 -3.2 Holliday junction DNA helicase RuvB compare
Psyr_4115 -1.4 -2.1 phosphoheptose isomerase compare
Psyr_4843 -1.4 -4.8 NUDIX hydrolase compare
Psyr_4161 -1.3 -2.3 Rod shape-determining protein MreD compare
Psyr_0044 -1.3 -1.3 transferase hexapeptide repeat protein compare
Psyr_1408 -1.3 -1.5 Holliday junction endonuclease RuvC compare
Psyr_1688 -1.3 -2.2 Protein of unknown function DUF1315 compare
Psyr_4424 -1.3 -5.0 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_0293 -1.3 -6.4 Polyphosphate kinase compare
Psyr_5067 -1.3 -1.9 conserved hypothetical protein compare
Psyr_2897 -1.3 -4.0 regulatory protein, LuxR:Response regulator receiver compare
Psyr_3282 -1.3 -4.4 transcriptional regulator, TetR family compare
Psyr_0528 -1.2 -1.6 Carbamoyltransferase compare
Psyr_3681 -1.2 -1.8 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_1040 -1.2 -2.9 RNA polymerase sigma factor, ECF subfamily compare
Psyr_5050 -1.2 -3.6 transcriptional regulator, LysR family compare
Psyr_4839 -1.2 -7.1 hypothetical protein compare
Psyr_3324 -1.2 -3.5 transcriptional regulator, TetR family compare
Psyr_0574 -1.1 -2.4 protease FtsH subunit HflK compare
Psyr_0849 -1.1 -3.9 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_1638 -1.1 -1.6 RNAse E compare
Psyr_2471 -1.1 -2.1 hydroxymethylglutaryl-CoA lyase compare
Psyr_5034 -1.1 -4.5 CBS:Protein of unknown function DUF21:Transporter-associated region compare
Psyr_4416 -1.1 -2.0 precorrin-8X methylmutase compare
Psyr_4822 -1.1 -2.7 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_5038 -1.1 -5.9 phosphate ABC transporter ATP-binding protein, PhoT family compare
Psyr_4566 -1.1 -4.5 Peptidase M23B compare
Psyr_0137 -1.0 -1.7 outer membrane transport energization protein ExbD compare
Psyr_3906 -1.0 -1.7 regulatory protein, DeoR compare
Psyr_3674 -1.0 -1.6 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_0395 -1.0 -3.0 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_0549 -1.0 -2.5 Metallophosphoesterase compare
Psyr_4158 -1.0 -4.6 conserved hypothetical protein compare
Psyr_3677 -1.0 -2.0 Aminotransferase, class I and II compare
Psyr_0575 -1.0 -1.5 protease FtsH subunit HflC compare
Psyr_0201 -1.0 -4.0 ATP-dependent DNA helicase RecG compare
Psyr_0033 -1.0 -1.8 tryptophan synthase, alpha chain compare
Psyr_0811 -1.0 -4.6 Integral membrane protein TerC compare
Psyr_3672 -1.0 -1.9 cobalamin-5'-phosphate synthase compare
Psyr_4420 -0.9 -2.5 precorrin-6A reductase compare
Psyr_4408 -0.9 -4.0 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_4122 -0.9 -3.9 AFG1-like ATPase compare
Psyr_3262 -0.9 -2.3 dnaK suppressor protein, putative compare
Psyr_0827 -0.9 -2.8 pantothenate synthetase compare
Psyr_4415 -0.9 -4.0 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase compare
Psyr_1013 -0.9 -2.3 hypothetical protein compare
Psyr_0579 -0.9 -4.5 RNAse R compare
Psyr_0364 -0.8 -2.2 sodium/proton antiporter, NhaA family compare
Psyr_4178 -0.8 -3.0 tRNA pseudouridine synthase B compare
Psyr_2151 -0.8 -1.9 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_1594 -0.8 -3.5 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_0261 -0.8 -2.8 conserved hypothetical protein compare
Psyr_0215 -0.8 -4.4 Exodeoxyribonuclease III xth compare
Psyr_0214 -0.8 -1.8 conserved hypothetical protein compare
Psyr_1910 -0.8 -1.8 VacJ-like lipoprotein compare
Psyr_4941 -0.8 -2.9 NUDIX hydrolase compare
Psyr_1544 -0.8 -3.3 SirA-like protein compare
Psyr_0275 -0.8 -3.4 Periplasmic solute binding protein compare
Psyr_4596 -0.8 -2.1 conserved hypothetical protein compare
Psyr_4842 -0.8 -3.5 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_2467 -0.7 -2.7 3-methylcrotonoyl-CoA carboxylase, alpha subunit compare
Psyr_5135 -0.7 -1.2 Protein of unknown function DUF37 compare
Psyr_1109 -0.7 -3.5 6-phosphogluconate dehydratase compare
Psyr_1160 -0.7 -4.8 Uncharacterized protein conserved in bacteria-like protein compare
Psyr_1614 -0.7 -0.9 lipid A biosynthesis acyltransferase compare
Psyr_0291 -0.7 -2.4 DedA compare
Psyr_1953 -0.7 -1.0 conserved hypothetical protein compare
Psyr_2201 -0.7 -2.6 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family compare
Psyr_0519 -0.7 -4.0 Glutamate-ammonia-ligase adenylyltransferase compare
Psyr_0255 -0.7 -1.2 glutamate-cysteine ligase compare
Psyr_3955 -0.7 -2.0 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF compare
Psyr_4140 -0.7 -1.1 Protein of unknown function DUF140 compare
Psyr_2073 -0.7 -2.4 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase compare
Psyr_0493 -0.7 -1.4 CheW-like protein compare
Psyr_0059 -0.7 -4.3 HemY, N-terminal:HemY, N-terminal:HemY, N-terminal compare
Psyr_4884 -0.7 -2.9 Rhodanese-like protein compare
Psyr_0983 -0.7 -3.2 Protein of unknown function DUF159 compare
Psyr_RNA61 -0.7 -1.9 tRNA-Gly compare
Psyr_3585 -0.7 -1.7 Sua5/YciO/YrdC/YwlC compare
Psyr_3055 -0.7 -1.6 Aminoglycoside phosphotransferase compare
Psyr_3399 -0.7 -2.9 Endoribonuclease L-PSP compare
Psyr_4125 -0.6 -0.6 Protein of unknown function DUF1043 compare
Psyr_4830 -0.6 -1.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4991 -0.6 -0.4 hypothetical protein compare
Psyr_4581 -0.6 -1.6 anthranilate synthase, component II compare
Psyr_2256 -0.6 -2.2 ABC transporter compare
Psyr_0699 -0.6 -1.8 CDS compare
Psyr_3636 -0.6 -4.7 Polysaccharide biosynthesis protein CapD compare
Psyr_0659 -0.6 -3.0 transcriptional regulator, LysR family compare
Psyr_1378 -0.6 -1.2 RecA protein compare
Psyr_4159 -0.6 -3.1 RNAse G compare
Psyr_4019 -0.6 -2.2 H-NS family protein MvaT compare
Psyr_1947 -0.6 -2.3 MbtH-like protein compare
Psyr_2456 -0.6 -1.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_2398 -0.6 -2.0 ABC transporter compare
Psyr_2970 -0.6 -2.9 TPR repeat protein:TPR repeat protein compare
Psyr_2469 -0.6 -2.9 Propionyl-CoA carboxylase compare
Psyr_0817 -0.6 -2.4 N-acetylmuramoyl-L-alanine amidase, family 2 compare
Psyr_2017 -0.6 -3.0 Heat shock protein Hsp90:ATP-binding region, ATPase-like protein compare
Psyr_3820 -0.6 -3.1 conserved domain protein compare
Psyr_2927 -0.6 -1.2 transcriptional regulator, TetR family compare
Psyr_3755 -0.6 -0.7 conserved hypothetical protein compare
Psyr_1317 -0.6 -1.6 conserved hypothetical protein compare
Psyr_4754 -0.6 -0.5 16S rRNA m(2)G-966 methyltransferase compare
Psyr_0278 -0.6 -2.8 ABC-3 compare
Psyr_3290 -0.6 -1.7 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_3450 -0.6 -2.3 Hpt compare
Psyr_1811 -0.6 -2.1 transcriptional regulator, GntR family compare
Psyr_3427 -0.6 -1.2 conserved hypothetical protein compare
Psyr_1407 -0.6 -2.2 Protein of unknown function DUF28 compare
Psyr_2449 -0.6 -1.9 Response regulator receiver compare
Psyr_0573 -0.6 -2.7 GTP-binding protein HflX compare
Psyr_2461 -0.6 -1.3 Uncharacterized conserved protein UCP030820 compare
Psyr_0497 -0.6 -1.7 LamB/YcsF compare
Psyr_0432 -0.6 -2.3 conserved hypothetical protein compare
Psyr_2987 -0.6 -2.2 Cof protein:HAD-superfamily hydrolase, subfamily IIB compare
Psyr_3678 -0.6 -2.0 adenosylcobinamide-phosphate synthase compare
Psyr_0982 -0.6 -1.3 conserved hypothetical protein compare
Psyr_0914 -0.6 -3.8 Glycosyl transferase, group 1 compare
Psyr_4476 -0.6 -2.8 dTDP-4-dehydrorhamnose reductase compare
Psyr_0532 -0.6 -1.6 conserved hypothetical protein compare
Psyr_4940 -0.6 -1.4 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_1663 -0.6 -2.1 phosphoribosylanthranilate isomerase compare
Psyr_4813 -0.6 -1.4 Short-chain dehydrogenase/reductase SDR compare
Psyr_1386 -0.6 -2.6 transcriptional regulator, LysR family compare
Psyr_3954 -0.6 -1.8 GTP-binding protein LepA compare
Psyr_4786 -0.6 -0.7 hypothetical protein compare
Psyr_4567 -0.6 -1.6 Protein of unknown function UPF0075 compare
Psyr_2680 -0.6 -1.6 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3562 -0.6 -2.4 succinylglutamic semialdehyde dehydrogenase compare
Psyr_2860 -0.5 -1.9 hypothetical protein compare
Psyr_3637 -0.5 -3.7 Glycosyl transferase, family 4 compare
Psyr_2628 -0.5 -2.3 ABC transporter compare
Psyr_0704 -0.5 -2.9 glutamate 5-kinase compare
Psyr_4837 -0.5 -4.2 Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase compare
Psyr_5132 -0.5 -0.5 Glucose-inhibited division protein A subfamily compare
Psyr_2765 -0.5 -1.2 conserved domain protein compare
Psyr_1090 -0.5 -2.3 DNA polymerase III, chi subunit compare
Psyr_3475 -0.5 -1.8 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_3675 -0.5 -1.3 adenosylcobinamide kinase compare
Psyr_2190 -0.5 -1.7 NADH:flavin oxidoreductase/NADH oxidase compare
Psyr_2030 -0.5 -1.5 Calcium-binding EF-hand compare
Psyr_0081 -0.5 -0.6 ABC transporter compare
Psyr_4464 -0.5 -0.8 lipoprotein, putative compare
Psyr_0806 -0.5 -2.7 conserved hypothetical protein compare
Psyr_3183 -0.5 -3.0 ATP-dependent Clp protease ATP-binding subunit ClpA compare
Psyr_0919 -0.5 -3.5 Chromosome segregation ATPase-like protein compare
Psyr_3110 -0.5 -1.5 Nucleoside 2-deoxyribosyltransferase compare
Psyr_5009 -0.5 -3.0 conserved hypothetical protein compare
Psyr_4100 -0.5 -2.3 D-alanine--D-alanine ligase compare
Psyr_1402 -0.5 -1.3 SlyX compare
Psyr_0920 -0.5 -4.2 Glycosyl transferase, group 1 compare
Psyr_0680 -0.5 -1.3 DNA helicase/exodeoxyribonuclease V, gamma subunit compare
Psyr_2446 -0.5 -2.6 MCP methyltransferase, CheR-type compare
Psyr_0228 -0.5 -2.6 Major facilitator superfamily compare
Psyr_4160 -0.5 -2.4 Maf-like protein compare
Psyr_2084 -0.5 -2.6 transcriptional regulator, GntR family compare
Psyr_4454 -0.5 -1.6 HupE/UreJ protein compare
Psyr_1937 -0.5 -1.9 UspA compare
Psyr_4362 -0.5 -1.2 Rare lipoprotein A compare
Psyr_4942 -0.5 -1.3 HAD-superfamily hydrolase, subfamily IA, variant 3 compare
Psyr_1370 -0.5 -1.8 tRNA pseudouridine synthase D, TruD compare
Psyr_4077 -0.5 -2.0 Methylated-DNA-[protein]-cysteine S-methyltransferase compare
Psyr_1419 -0.5 -1.0 preQ(0) biosynthesis protein QueC compare
Psyr_3287 -0.5 -0.9 DNA topoisomerase I compare
Psyr_2117 -0.5 -1.0 conserved hypothetical protein compare
Psyr_4673 -0.5 -1.4 Coenzyme PQQ synthesis D compare
Psyr_5131 -0.5 -1.5 16S rRNA m(7)G-527 methyltransferase compare
Psyr_4855 -0.5 -1.8 conserved hypothetical protein compare
Psyr_4414 -0.5 -1.5 precorrin-3 methyltransferase compare
Psyr_0435 -0.5 -0.8 membrane protein, putative compare
Psyr_4733 -0.5 -2.0 betaine aldehyde dehydrogenase compare
Psyr_2259 -0.5 -0.9 Beta-lactamase-like protein compare
Psyr_3593 -0.5 -3.3 K+ transporter Trk compare
Psyr_0087 -0.5 -2.3 Fatty acid desaturase compare
Psyr_2904 -0.5 -3.1 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1800 -0.5 -1.4 transcriptional regulator, LysR family compare
Psyr_4946 -0.5 -3.2 Oxidoreductase alpha (molybdopterin) subunit compare
Psyr_4025 -0.5 -2.0 ATPase compare
Psyr_0884 -0.5 -2.7 conserved hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress 6-methoxy-2(3H)-benzoxazolone across organisms