Experiment set18S34 for Pseudomonas syringae pv. syringae B728a

Compare to:

MBOA 0.5 mM

200 most important genes:

  gene name fitness t score description  
Psyr_5088 -4.7 -12.0 regulatory protein, LuxR:Response regulator receiver compare
Psyr_5091 -3.8 -18.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_5089 -3.4 -7.3 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_5090 -3.1 -7.1 ABC transporter compare
Psyr_2139 -2.4 -8.8 Kef-type potassium/proton antiporter, CPA2 family compare
Psyr_1762 -2.4 -11.5 conserved hypothetical protein compare
Psyr_2900 -2.3 -6.0 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase compare
Psyr_1749 -2.1 -7.6 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_1613 -2.1 -3.4 septum site-determining protein MinC compare
Psyr_0044 -2.0 -2.0 transferase hexapeptide repeat protein compare
Psyr_3425 -1.8 -2.6 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_0857 -1.7 -3.0 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_5041 -1.7 -9.9 phosphate ABC transporter substrate-binding protein, PhoT family compare
Psyr_5040 -1.7 -11.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0214 -1.7 -3.8 conserved hypothetical protein compare
Psyr_5039 -1.6 -10.1 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3282 -1.6 -5.6 transcriptional regulator, TetR family compare
Psyr_1410 -1.5 -3.2 Holliday junction DNA helicase RuvB compare
Psyr_0811 -1.4 -5.3 Integral membrane protein TerC compare
Psyr_4125 -1.4 -1.8 Protein of unknown function DUF1043 compare
Psyr_2897 -1.4 -4.2 regulatory protein, LuxR:Response regulator receiver compare
Psyr_5034 -1.4 -7.1 CBS:Protein of unknown function DUF21:Transporter-associated region compare
Psyr_3906 -1.3 -2.1 regulatory protein, DeoR compare
Psyr_4839 -1.2 -7.5 hypothetical protein compare
Psyr_4115 -1.2 -2.0 phosphoheptose isomerase compare
Psyr_3791 -1.2 -2.1 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_3013 -1.2 -1.1 magnesium chelatase subunit ChlD compare
Psyr_0293 -1.2 -6.3 Polyphosphate kinase compare
Psyr_4136 -1.2 -1.3 BolA-like protein compare
Psyr_4417 -1.2 -1.3 Ferredoxin--nitrite reductase compare
Psyr_0017 -1.2 -3.3 16S rRNA m(5)C-967 methyltransferase compare
Psyr_4415 -1.2 -5.0 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase compare
Psyr_4122 -1.2 -3.8 AFG1-like ATPase compare
Psyr_3262 -1.2 -2.7 dnaK suppressor protein, putative compare
Psyr_0575 -1.2 -1.6 protease FtsH subunit HflC compare
Psyr_0395 -1.2 -3.4 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_5038 -1.1 -6.8 phosphate ABC transporter ATP-binding protein, PhoT family compare
Psyr_0215 -1.1 -5.6 Exodeoxyribonuclease III xth compare
Psyr_3698 -1.1 -2.1 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_2327 -1.1 -3.9 GTP cyclohydrolase subunit MoaA compare
Psyr_0574 -1.1 -2.4 protease FtsH subunit HflK compare
Psyr_4151 -1.1 -1.2 Phosphocarrier HPr protein compare
Psyr_4566 -1.1 -4.6 Peptidase M23B compare
Psyr_3585 -1.1 -3.1 Sua5/YciO/YrdC/YwlC compare
Psyr_1544 -1.0 -4.3 SirA-like protein compare
Psyr_4884 -1.0 -4.3 Rhodanese-like protein compare
Psyr_4843 -1.0 -3.0 NUDIX hydrolase compare
Psyr_1400 -1.0 -7.4 outer membrane porin compare
Psyr_0291 -1.0 -3.3 DedA compare
Psyr_1408 -1.0 -1.4 Holliday junction endonuclease RuvC compare
Psyr_3678 -1.0 -2.9 adenosylcobinamide-phosphate synthase compare
Psyr_4842 -0.9 -3.3 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_0364 -0.9 -3.4 sodium/proton antiporter, NhaA family compare
Psyr_0817 -0.9 -3.1 N-acetylmuramoyl-L-alanine amidase, family 2 compare
Psyr_2823 -0.9 -1.7 hypothetical protein compare
Psyr_3053 -0.9 -2.8 conserved hypothetical protein compare
Psyr_0487 -0.9 -0.8 glutathione synthase compare
Psyr_4420 -0.9 -2.7 precorrin-6A reductase compare
Psyr_4414 -0.9 -2.7 precorrin-3 methyltransferase compare
Psyr_3673 -0.9 -1.2 Phosphoglycerate/bisphosphoglycerate mutase compare
Psyr_3889 -0.9 -2.5 conserved hypothetical protein compare
Psyr_2807 -0.9 -1.4 NinB compare
Psyr_3226 -0.8 -3.9 Transcriptional activator RfaH compare
Psyr_4941 -0.8 -2.0 NUDIX hydrolase compare
Psyr_0579 -0.8 -4.5 RNAse R compare
Psyr_3676 -0.8 -1.6 adenosylcobyric acid synthase (glutamine-hydrolysing) compare
Psyr_4418 -0.8 -1.2 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_0081 -0.8 -1.3 ABC transporter compare
Psyr_2201 -0.8 -2.1 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family compare
Psyr_4158 -0.8 -4.0 conserved hypothetical protein compare
Psyr_2196 -0.8 -2.3 Urease accessory protein UreG compare
Psyr_0532 -0.8 -2.1 conserved hypothetical protein compare
Psyr_2256 -0.8 -2.2 ABC transporter compare
Psyr_1499 -0.8 -2.6 Protein of unknown function DUF compare
Psyr_3637 -0.8 -5.0 Glycosyl transferase, family 4 compare
Psyr_2894 -0.8 -1.4 conserved hypothetical protein compare
Psyr_4586 -0.8 -2.8 tail protein, putative compare
Psyr_3193 -0.7 -1.0 Transcription factor jumonji, jmjC compare
Psyr_3611 -0.7 -3.7 Protein of unknown function DUF815 compare
Psyr_1407 -0.7 -2.9 Protein of unknown function DUF28 compare
Psyr_3934 -0.7 -1.6 Short-chain dehydrogenase/reductase SDR compare
Psyr_3014 -0.7 -1.4 protoporphyrin IX magnesium-chelatase compare
Psyr_4887 -0.7 -4.1 Peptidase S41A, C-terminal protease compare
Psyr_1378 -0.7 -1.2 RecA protein compare
Psyr_3932 -0.7 -1.5 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_0444 -0.7 -0.9 Malonate decarboxylase delta subunit compare
Psyr_1691 -0.7 -3.6 hypothetical protein compare
Psyr_3162 -0.7 -1.9 Metalloprotease inhibitor/calysin compare
Psyr_0573 -0.7 -3.4 GTP-binding protein HflX compare
Psyr_4141 -0.7 -1.8 ABC transporter compare
Psyr_2253 -0.7 -1.0 Phosphonate metabolism compare
Psyr_0393 -0.7 -2.2 Protein of unknown function DUF971 compare
Psyr_4978 -0.7 -2.4 hypothetical protein compare
Psyr_3841 -0.7 -1.2 conserved hypothetical protein compare
Psyr_5104 -0.7 -3.1 transport system permease protein compare
Psyr_3120 -0.7 -2.4 D-glucarate dehydratase compare
Psyr_1160 -0.7 -4.9 Uncharacterized protein conserved in bacteria-like protein compare
Psyr_3675 -0.7 -1.3 adenosylcobinamide kinase compare
Psyr_3258 -0.7 -1.8 conserved hypothetical protein compare
Psyr_1419 -0.7 -1.4 preQ(0) biosynthesis protein QueC compare
Psyr_1594 -0.7 -2.5 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_4155 -0.7 -1.6 Protein of unknown function DUF615 compare
Psyr_4178 -0.7 -2.5 tRNA pseudouridine synthase B compare
Psyr_4822 -0.7 -1.7 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_0137 -0.7 -1.2 outer membrane transport energization protein ExbD compare
Psyr_2469 -0.7 -3.2 Propionyl-CoA carboxylase compare
Psyr_4346 -0.7 -3.2 PhoH-like protein compare
Psyr_3755 -0.6 -1.2 conserved hypothetical protein compare
Psyr_3677 -0.6 -1.3 Aminotransferase, class I and II compare
Psyr_2464 -0.6 -3.2 methionine synthase (B12-dependent) compare
Psyr_5131 -0.6 -2.0 16S rRNA m(7)G-527 methyltransferase compare
Psyr_5135 -0.6 -1.1 Protein of unknown function DUF37 compare
Psyr_0278 -0.6 -3.1 ABC-3 compare
Psyr_4802 -0.6 -2.6 Secretion protein HlyD compare
Psyr_3867 -0.6 -1.0 hypothetical protein compare
Psyr_0535 -0.6 -1.1 toluene tolerance protein, putative compare
Psyr_0549 -0.6 -1.1 Metallophosphoesterase compare
Psyr_3808 -0.6 -1.1 hypothetical protein compare
Psyr_3793 -0.6 -1.7 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_4159 -0.6 -3.5 RNAse G compare
Psyr_0519 -0.6 -3.4 Glutamate-ammonia-ligase adenylyltransferase compare
Psyr_0436 -0.6 -1.2 Phosphopantetheine-binding protein compare
Psyr_4476 -0.6 -2.3 dTDP-4-dehydrorhamnose reductase compare
Psyr_2847 -0.6 -2.3 hypothetical protein compare
Psyr_3694 -0.6 -2.6 MazG, bacterial compare
Psyr_4837 -0.6 -4.5 Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase compare
Psyr_2757 -0.6 -1.4 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3241 -0.6 -2.2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein compare
Psyr_0201 -0.6 -2.2 ATP-dependent DNA helicase RecG compare
Psyr_0674 -0.6 -1.7 Protein of unknown function UPF0029 compare
Psyr_1688 -0.6 -1.1 Protein of unknown function DUF1315 compare
Psyr_0954 -0.6 -1.9 Protein of unknown function UPF0153 compare
Psyr_4754 -0.6 -0.6 16S rRNA m(2)G-966 methyltransferase compare
Psyr_0630 -0.6 -2.4 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
Psyr_3023 -0.6 -1.7 conserved hypothetical protein compare
Psyr_0275 -0.6 -2.9 Periplasmic solute binding protein compare
Psyr_0255 -0.6 -1.2 glutamate-cysteine ligase compare
Psyr_0059 -0.6 -3.8 HemY, N-terminal:HemY, N-terminal:HemY, N-terminal compare
Psyr_2059 -0.5 -2.7 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_0134 -0.5 -2.5 Aminotransferase, class V compare
Psyr_0849 -0.5 -2.3 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_3636 -0.5 -3.9 Polysaccharide biosynthesis protein CapD compare
Psyr_3681 -0.5 -0.9 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
Psyr_0447 -0.5 -1.6 malonate decarboxylase subunit, putative compare
Psyr_2461 -0.5 -1.6 Uncharacterized conserved protein UCP030820 compare
Psyr_2411 -0.5 -2.0 Short-chain dehydrogenase/reductase SDR compare
Psyr_1820 -0.5 -2.2 conserved hypothetical protein compare
Psyr_4407 -0.5 -0.8 phosphoribosylamine--glycine ligase compare
Psyr_0565 -0.5 -2.7 Protein of unknown function UPF0126 compare
Psyr_0174 -0.5 -2.1 Sodium:dicarboxylate symporter compare
Psyr_0845 -0.5 -1.0 conserved hypothetical protein compare
Psyr_5050 -0.5 -1.2 transcriptional regulator, LysR family compare
Psyr_3280 -0.5 -2.1 methylthioadenosine phosphorylase compare
Psyr_0261 -0.5 -2.1 conserved hypothetical protein compare
Psyr_3812 -0.5 -1.6 CDS compare
Psyr_2467 -0.5 -2.1 3-methylcrotonoyl-CoA carboxylase, alpha subunit compare
Psyr_0056 -0.5 -3.0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ compare
Psyr_0394 -0.5 -2.0 Heat shock protein HslU compare
Psyr_3693 -0.5 -2.2 conserved hypothetical protein compare
Psyr_3545 -0.5 -1.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_4408 -0.5 -2.4 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_0920 -0.5 -4.1 Glycosyl transferase, group 1 compare
Psyr_3644 -0.5 -1.6 prephenate dehydrogenase compare
Psyr_2243 -0.5 -1.7 Endoribonuclease L-PSP compare
Psyr_2562 -0.5 -0.9 hypothetical protein compare
Psyr_2095 -0.5 -1.9 Conserved TM helix compare
Psyr_1079 -0.5 -2.6 conserved hypothetical protein compare
Psyr_0053 -0.5 -1.6 conserved hypothetical protein compare
Psyr_4140 -0.5 -0.9 Protein of unknown function DUF140 compare
Psyr_1198 -0.5 -1.1 type III secretion protein HrpF compare
Psyr_2925 -0.5 -1.4 Helix-turn-helix motif protein compare
Psyr_1140 -0.5 -1.2 Disulfide bond formation protein DsbB compare
Psyr_0559 -0.5 -2.5 thiosulfate sulfurtransferase compare
Psyr_1895 -0.5 -1.5 conserved hypothetical protein compare
Psyr_0432 -0.5 -2.3 conserved hypothetical protein compare
Psyr_3377 -0.5 -1.3 transcriptional regulator, MarR family compare
Psyr_4466 -0.5 -1.3 Thioredoxin compare
Psyr_3055 -0.5 -1.3 Aminoglycoside phosphotransferase compare
Psyr_1638 -0.5 -0.7 RNAse E compare
Psyr_2270 -0.5 -1.6 transferase hexapeptide repeat protein compare
Psyr_1975 -0.5 -1.4 Integrase, catalytic region compare
Psyr_0699 -0.5 -1.2 CDS compare
Psyr_0947 -0.5 -2.2 TPR repeat protein:TPR repeat protein compare
Psyr_1546 -0.5 -2.4 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen compare
Psyr_3031 -0.5 -1.5 Thiolase compare
Psyr_3933 -0.5 -1.3 conserved hypothetical protein compare
Psyr_3476 -0.5 -1.3 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_4830 -0.5 -1.1 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4882 -0.5 -2.2 protein translocase subunit secB compare
Psyr_2071 -0.5 -1.2 outer membrane lipoprotein OprI compare
Psyr_0492 -0.5 -3.3 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt compare
Psyr_4596 -0.5 -1.5 conserved hypothetical protein compare
Psyr_2292 -0.5 -1.1 L-glutaminase compare
Psyr_2973 -0.5 -0.8 Glyoxalase I compare
Psyr_2339 -0.5 -1.5 hypothetical protein compare
Psyr_0405 -0.5 -2.0 Pilus assembly protein, PilO compare
Psyr_1270 -0.5 -1.0 conserved hypothetical protein compare
Psyr_2594 -0.5 -0.8 unknown conserved protein in bacilli compare
Psyr_4612 -0.5 -2.1 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2431 -0.5 -3.0 Zinc-containing alcohol dehydrogenase superfamily compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress 6-methoxy-2(3H)-benzoxazolone across organisms