Experiment set18S34 for Pseudomonas syringae pv. syringae B728a

Compare to:

MBOA 0.5 mM

200 most detrimental genes:

  gene name fitness t score description  
Psyr_0383 +1.7 2.0 Twin-arginine translocation protein TatB compare
Psyr_3567 +1.4 3.3 L-arginine ABC transporter ATP-binding protein / L-ornithine ABC transporter ATP-binding protein compare
Psyr_1668 +1.3 5.5 amidophosphoribosyltransferase compare
Psyr_2264 +1.2 2.8 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_3198 +1.1 1.7 NADH dehydrogenase subunit B compare
Psyr_4015 +1.1 2.4 conserved domain protein compare
Psyr_1269 +1.0 2.1 phosphoribosylformylglycinamidine synthase compare
Psyr_1121 +1.0 1.2 6-phosphogluconolactonase compare
Psyr_3952 +0.9 2.4 conserved hypothetical protein compare
Psyr_2285 +0.9 1.6 Twin-arginine translocation pathway signal compare
Psyr_3905 +0.9 5.1 glycerol kinase compare
Psyr_2468 +0.8 1.6 Enoyl-CoA hydratase/isomerase compare
Psyr_2118 +0.8 3.7 protein of unknown function DUF883 compare
Psyr_0735 +0.8 2.1 Peptidase S24, S26A and S26B compare
Psyr_2088 +0.8 1.2 2-methylaconitate cis-trans isomerase compare
Psyr_1748 +0.8 3.4 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_3039 +0.8 2.3 protein of unknown function DUF883 compare
Psyr_1021 +0.7 3.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_5072 +0.7 1.1 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_4380 +0.7 1.7 translation initiation factor 1 (eIF-1/SUI1) compare
Psyr_4932 +0.7 5.3 agmatine deiminase compare
Psyr_0132 +0.7 2.5 conserved hypothetical protein compare
Psyr_3293 +0.7 1.2 UspA compare
Psyr_3874 +0.7 4.5 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_3257 +0.7 1.6 multisubunit potassium/proton antiporter, PhaG subunit compare
Psyr_1019 +0.7 4.0 Dihydroneopterin aldolase compare
Psyr_3458 +0.7 1.0 Flagellar hook-basal body complex protein FliE compare
Psyr_0623 +0.7 2.1 Peptidase S24, S26A and S26B compare
Psyr_0580 +0.7 1.5 23S rRNA Gm-2251 2'-O-methyltransferase compare
Psyr_4404 +0.7 2.2 tRNA-U20-dihydrouridine synthase compare
Psyr_2067 +0.7 1.8 ABC transporter compare
Psyr_3419 +0.7 2.1 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_0822 +0.7 1.2 1-phosphofructokinase compare
Psyr_1662 +0.7 3.4 tRNA pseudouridine synthase compare
Psyr_3854 +0.7 1.1 OmpA/MotB compare
Psyr_3878 +0.7 4.4 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_1067 +0.7 1.0 GTP cyclohydrolase subunit MoaC compare
Psyr_4007 +0.7 5.3 Secretion protein HlyD compare
Psyr_0858 +0.6 1.8 conserved hypothetical protein compare
Psyr_4637 +0.6 2.2 acyl-phosphate glycerol-3-phosphate acyltransferase compare
Psyr_4008 +0.6 5.5 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_0545 +0.6 1.2 Permease for cytosine/purines, uracil, thiamine, allantoin compare
Psyr_4381 +0.6 5.2 arginine decarboxylase compare
Psyr_4682 +0.6 1.6 conserved hypothetical protein compare
Psyr_3876 +0.6 5.1 amino acid ABC transporter membrane protein 2, PAAT family compare
Psyr_0070 +0.6 1.2 hypothetical protein compare
Psyr_3904 +0.6 3.4 Major intrinsic protein compare
Psyr_4112 +0.6 3.8 Protein of unknown function UPF0011 compare
Psyr_2386 +0.6 1.8 hypothetical protein compare
Psyr_2114 +0.6 2.3 two component transcriptional regulator, LuxR family compare
Psyr_3473 +0.6 1.9 Flagellar P-ring protein compare
Psyr_3423 +0.6 4.6 coproporphyrinogen III oxidase, anaerobic compare
Psyr_1988 +0.6 1.5 2-keto-3-deoxy-phosphogalactonate aldolase compare
Psyr_4480 +0.6 1.2 outer membrane transport energization protein TonB compare
Psyr_3618 +0.6 2.5 Catalytic LigB subunit of aromatic ring-opening dioxygenase compare
Psyr_3570 +0.6 3.5 L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein compare
Psyr_4490 +0.6 1.2 transcriptional regulator, DeoR family compare
Psyr_4068 +0.6 2.1 conserved hypothetical protein compare
Psyr_3739 +0.6 1.7 conserved hypothetical protein compare
Psyr_3082 +0.6 3.2 MltA-interacting MipA compare
Psyr_4648 +0.6 3.7 hypothetical protein compare
Psyr_4740 +0.6 3.9 thiazole-phosphate synthase compare
Psyr_4933 +0.6 3.0 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_3253 +0.6 2.4 multisubunit potassium/proton antiporter, PhaC subunit compare
Psyr_0453 +0.5 3.4 16S rRNA m(3)U-1498 methyltransferase compare
Psyr_1728 +0.5 1.8 tRNA--hydroxylase compare
Psyr_2752 +0.5 1.7 conserved hypothetical protein compare
Psyr_1124 +0.5 2.9 conserved hypothetical protein compare
Psyr_0371 +0.5 3.3 conserved hypothetical protein compare
Psyr_2590 +0.5 1.3 Periplasmic binding protein compare
Psyr_0831 +0.5 1.1 Two-component response regulator CbrB compare
Psyr_2396 +0.5 2.0 Tartrate dehydrogenase compare
Psyr_0464 +0.5 1.1 hypothetical protein compare
Psyr_4224 +0.5 1.3 conserved hypothetical protein compare
Psyr_2278 +0.5 2.0 luciferase compare
Psyr_4254 +0.5 1.3 conserved hypothetical protein compare
Psyr_0441 +0.5 1.1 conserved hypothetical protein compare
Psyr_1747 +0.5 1.7 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_2830 +0.5 2.1 conserved hypothetical protein compare
Psyr_4911 +0.5 2.7 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_1148 +0.5 2.0 branched chain amino acid aminotransferase apoenzyme compare
Psyr_2501 +0.5 1.8 Hemerythrin compare
Psyr_4874 +0.5 1.0 ABC transporter compare
Psyr_4259 +0.5 3.9 ATP-dependent protease, putative compare
Psyr_3947 +0.5 0.9 Methyltransferase, putative compare
Psyr_0529 +0.5 1.1 Glycosyl transferase, group 1 compare
Psyr_0531 +0.5 0.4 LmbE-like protein compare
Psyr_3742 +0.5 3.4 FAD dependent oxidoreductase:Protein of unknown function DUF752 compare
Psyr_3397 +0.5 2.0 transcriptional regulator, LysR family compare
Psyr_3850 +0.5 1.7 lipoprotein, putative compare
Psyr_1946 +0.5 1.0 diaminobutyrate aminotransferase apoenzyme compare
Psyr_3081 +0.5 1.3 Secretion protein HlyD compare
Psyr_2552 +0.5 1.3 cyclase/dehydrase compare
Psyr_3022 +0.5 1.3 transcriptional regulator, AsnC family compare
Psyr_1999 +0.5 1.9 OmpA/MotB compare
Psyr_0411 +0.5 4.1 glutamate synthase (NADPH) large subunit compare
Psyr_3281 +0.5 0.8 Glycoside hydrolase, family 3, N-terminal compare
Psyr_0550 +0.5 1.4 Protein of unknown function UPF0227 compare
Psyr_2531 +0.5 1.8 transcriptional regulator, LysR family compare
Psyr_0541 +0.5 1.4 Small multidrug resistance protein compare
Psyr_4576 +0.5 2.2 OsmC-like protein compare
Psyr_2265 +0.4 2.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3233 +0.4 1.5 FMN reductase compare
Psyr_2942 +0.4 2.1 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_4912 +0.4 2.6 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_0985 +0.4 2.0 Protein of unknown function UPF0016 compare
Psyr_1424 +0.4 1.2 Peptidase S24, S26A and S26B compare
Psyr_0246 +0.4 2.7 aminomethyltransferase compare
Psyr_4009 +0.4 2.6 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3709 +0.4 1.6 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_3915 +0.4 1.4 Alpha/beta hydrolase fold protein compare
Psyr_1334 +0.4 1.4 Cysteine desulfuration protein SufE compare
Psyr_0726 +0.4 1.5 ribosomal large subunit pseudouridine synthase D compare
Psyr_3337 +0.4 1.4 gluconate kinase, SKI family compare
Psyr_4403 +0.4 1.7 conserved hypothetical protein compare
Psyr_3199 +0.4 0.7 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_4736 +0.4 1.6 conserved hypothetical protein compare
Psyr_0076 +0.4 1.7 Xanthine phosphoribosyltransferase compare
Psyr_2086 +0.4 2.6 2-methylcitrate synthase compare
Psyr_4409 +0.4 2.6 Multiple antibiotic resistance (MarC)-related protein compare
Psyr_3569 +0.4 3.1 L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein compare
Psyr_0344 +0.4 2.3 Secretion protein HlyD compare
Psyr_2543 +0.4 1.7 conserved hypothetical protein compare
Psyr_2833 +0.4 1.2 CDS compare
Psyr_3571 +0.4 2.7 L-arginine-binding protein / L-ornithine-binding protein compare
Psyr_4785 +0.4 2.4 Protein of unknown function DUF1311 compare
Psyr_3568 +0.4 1.9 Succinylglutamate desuccinylase/aspartoacylase compare
Psyr_0746 +0.4 1.7 IS66 Orf2 like protein compare
Psyr_1689 +0.4 2.0 conserved hypothetical protein compare
Psyr_3751 +0.4 1.1 Carbon storage regulator compare
Psyr_1915 +0.4 1.8 Peptidase M20:Peptidase M20 compare
Psyr_4786 +0.4 0.6 hypothetical protein compare
Psyr_4051 +0.4 1.2 transcriptional regulator, ArsR family compare
Psyr_3498 +0.4 3.3 Conserved hypothetical protein 730 compare
Psyr_3777 +0.4 1.6 conserved hypothetical protein compare
Psyr_4336 +0.4 1.4 ribosomal large subunit pseudouridine synthase E compare
Psyr_0986 +0.4 1.3 16S rRNA m(2)G 1207 methyltransferase compare
Psyr_4296 +0.4 2.1 HI0933-like protein compare
Psyr_1716 +0.4 2.6 conserved hypothetical protein compare
Psyr_4836 +0.4 2.9 N-formylglutamate deformylase compare
Psyr_1037 +0.4 1.5 ribosomal subunit interface protein, putative compare
Psyr_2406 +0.4 1.1 Flavin reductase-like protein compare
Psyr_5063 +0.4 2.5 conserved domain protein compare
Psyr_3457 +0.4 2.1 Flagellar FliF M-ring protein compare
Psyr_1193 +0.4 0.9 type III helper protein HrpZ1 compare
Psyr_3958 +0.4 2.6 RNA polymerase, sigma-24 subunit, RpoE compare
Psyr_4634 +0.4 0.6 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_4567 +0.4 1.2 Protein of unknown function UPF0075 compare
Psyr_1190 +0.4 2.0 type III transcriptional regulator HrpR compare
Psyr_3702 +0.4 0.8 Arsenate reductase compare
Psyr_1978 +0.4 1.8 Thioesterase superfamily compare
Psyr_3875 +0.4 3.1 amino acid ABC transporter membrane protein 1, PAAT family compare
Psyr_1609 +0.4 1.8 Aspartyl aminopeptidase compare
Psyr_0546 +0.4 2.0 lipoprotein, putative compare
Psyr_4241 +0.4 2.2 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_1227 +0.4 0.4 Queuosine biosynthesis protein compare
Psyr_4389 +0.4 2.0 Flp/Fap pilin component compare
Psyr_4460 +0.4 0.7 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_1610 +0.4 2.1 ribosomal large subunit pseudouridine synthase A compare
Psyr_3299 +0.4 1.5 two component transcriptional regulator, LuxR family compare
Psyr_2389 +0.4 1.9 oxidoreductase, molybdopterin-binding subunit, putative compare
Psyr_4440 +0.4 1.5 Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_4301 +0.4 1.7 Protein of unknown function DUF88 compare
Psyr_4739 +0.4 2.8 tRNA (guanine-N(7)-)-methyltransferase compare
Psyr_0491 +0.4 1.3 chemotaxis sensory transducer compare
Psyr_1333 +0.4 2.0 UBA/THIF-type NAD/FAD binding fold protein compare
Psyr_0812 +0.4 1.9 stress protein compare
Psyr_1530 +0.4 1.2 hypothetical protein compare
Psyr_1746 +0.4 1.8 Trigger factor compare
Psyr_2060 +0.4 1.2 Sec-independent protein translocase TatD compare
Psyr_2275 +0.4 1.8 glutamate synthase (NADPH) GltB3 subunit compare
Psyr_4991 +0.4 0.5 hypothetical protein compare
Psyr_0837 +0.4 2.7 Sugar fermentation stimulation protein compare
Psyr_1910 +0.4 1.2 VacJ-like lipoprotein compare
Psyr_2332 +0.4 1.1 conserved hypothetical protein compare
Psyr_1987 +0.4 0.8 2-keto-3-deoxygalactonate kinase compare
Psyr_3354 +0.4 1.5 Ankyrin compare
Psyr_0356 +0.4 0.9 L-cystine ABC transporter ATP-binding protein / Diaminopimelate ABC transporter ATP-binding protein compare
Psyr_3837 +0.4 0.8 conserved hypothetical protein compare
Psyr_2221 +0.4 0.6 sarcosine oxidase, gamma subunit compare
Psyr_5073 +0.4 1.7 conserved hypothetical protein compare
Psyr_0815 +0.4 1.6 nicotinate-nucleotide pyrophosphorylase (carboxylating) compare
Psyr_4227 +0.4 2.3 Dihydrodipicolinate synthetase compare
Psyr_2116 +0.4 1.9 Deoxyguanosinetriphosphate triphosphohydrolase compare
Psyr_4473 +0.4 2.4 OmpW compare
Psyr_4092 +0.4 1.6 Glutathione S-transferase, N-terminal compare
Psyr_0437 +0.4 1.1 acyl carrier protein, putative compare
Psyr_0566 +0.4 2.6 4Fe-4S cluster binding protein compare
Psyr_4367 +0.4 0.8 Iojap-related protein compare
Psyr_2093 +0.4 2.2 Mg2+ transporter protein, CorA-like protein compare
Psyr_0774 +0.4 0.9 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_2031 +0.4 1.0 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_1039 +0.4 0.9 FecR protein compare
Psyr_1801 +0.4 1.2 1-aminocyclopropane-1-carboxylate deaminase compare
Psyr_0385 +0.4 1.0 phosphoribosyl-ATP pyrophosphatase compare
Psyr_2623 +0.4 2.1 conserved hypothetical protein compare
Psyr_1534 +0.4 2.3 chromosome partitioning related protein compare
Psyr_1170 +0.4 2.3 Amidase compare
Psyr_2882 +0.4 1.6 transcriptional regulator, AraC family compare
Psyr_1875 +0.4 1.5 Enoyl-CoA hydratase/isomerase compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress 6-methoxy-2(3H)-benzoxazolone across organisms