Experiment set18S33 for Pseudomonas syringae pv. syringae B728a

Compare to:

MBOA 0.5 mM

200 most important genes:

  gene name fitness t score description  
Psyr_5088 -4.7 -10.9 regulatory protein, LuxR:Response regulator receiver compare
Psyr_5091 -4.0 -18.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_5089 -3.9 -7.0 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_5090 -3.3 -9.5 ABC transporter compare
Psyr_4417 -2.8 -1.9 Ferredoxin--nitrite reductase compare
Psyr_3675 -2.4 -2.5 adenosylcobinamide kinase compare
Psyr_3698 -2.3 -2.2 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_1749 -2.3 -7.6 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_2139 -2.0 -7.8 Kef-type potassium/proton antiporter, CPA2 family compare
Psyr_0857 -2.0 -3.4 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_3886 -1.9 -1.3 methionyl-tRNA synthetase compare
Psyr_5040 -1.9 -11.7 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1762 -1.8 -9.6 conserved hypothetical protein compare
Psyr_0493 -1.8 -2.5 CheW-like protein compare
Psyr_1400 -1.8 -11.5 outer membrane porin compare
Psyr_4843 -1.8 -4.3 NUDIX hydrolase compare
Psyr_5039 -1.7 -11.3 Binding-protein-dependent transport systems inner membrane component compare
Psyr_3755 -1.6 -2.3 conserved hypothetical protein compare
Psyr_1419 -1.6 -2.3 preQ(0) biosynthesis protein QueC compare
Psyr_5041 -1.6 -9.6 phosphate ABC transporter substrate-binding protein, PhoT family compare
Psyr_2897 -1.5 -4.2 regulatory protein, LuxR:Response regulator receiver compare
Psyr_5034 -1.5 -6.5 CBS:Protein of unknown function DUF21:Transporter-associated region compare
Psyr_0885 -1.4 -3.0 conserved hypothetical protein compare
Psyr_0575 -1.4 -1.6 protease FtsH subunit HflC compare
Psyr_1688 -1.4 -2.7 Protein of unknown function DUF1315 compare
Psyr_3282 -1.4 -5.1 transcriptional regulator, TetR family compare
Psyr_2900 -1.3 -3.7 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase compare
Psyr_4730 -1.3 -3.1 FecR protein compare
Psyr_3281 -1.3 -1.5 Glycoside hydrolase, family 3, N-terminal compare
Psyr_4407 -1.3 -1.8 phosphoribosylamine--glycine ligase compare
Psyr_3791 -1.2 -2.7 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_4839 -1.2 -7.7 hypothetical protein compare
Psyr_0033 -1.2 -2.5 tryptophan synthase, alpha chain compare
Psyr_0849 -1.2 -4.0 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4141 -1.2 -2.6 ABC transporter compare
Psyr_3906 -1.2 -2.2 regulatory protein, DeoR compare
Psyr_4887 -1.2 -6.0 Peptidase S41A, C-terminal protease compare
Psyr_4566 -1.1 -4.6 Peptidase M23B compare
Psyr_4415 -1.1 -4.8 cobalt-factor II C20-methyltransferase / precorrin-2 C20-methyltransferase compare
Psyr_5050 -1.1 -2.7 transcriptional regulator, LysR family compare
Psyr_1613 -1.1 -2.5 septum site-determining protein MinC compare
Psyr_3638 -1.1 -2.8 UDP-glucose 4-epimerase, putative compare
Psyr_0293 -1.1 -5.8 Polyphosphate kinase compare
Psyr_3585 -1.1 -2.1 Sua5/YciO/YrdC/YwlC compare
Psyr_5067 -1.1 -1.9 conserved hypothetical protein compare
Psyr_5038 -1.1 -6.4 phosphate ABC transporter ATP-binding protein, PhoT family compare
Psyr_1910 -1.1 -1.9 VacJ-like lipoprotein compare
Psyr_4460 -1.1 -1.5 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_2327 -1.1 -3.8 GTP cyclohydrolase subunit MoaA compare
Psyr_4161 -1.1 -1.3 Rod shape-determining protein MreD compare
Psyr_3262 -1.1 -2.5 dnaK suppressor protein, putative compare
Psyr_4178 -1.0 -3.4 tRNA pseudouridine synthase B compare
Psyr_0017 -1.0 -3.4 16S rRNA m(5)C-967 methyltransferase compare
Psyr_4138 -1.0 -2.8 Toluene tolerance compare
Psyr_1109 -1.0 -5.1 6-phosphogluconate dehydratase compare
Psyr_0215 -1.0 -4.9 Exodeoxyribonuclease III xth compare
Psyr_3198 -1.0 -1.3 NADH dehydrogenase subunit B compare
Psyr_4750 -1.0 -2.4 cell division ATP-binding protein FtsE compare
Psyr_0524 -0.9 -1.2 Lipopolysaccharide kinase compare
Psyr_4842 -0.9 -3.9 Phosphoenolpyruvate-protein phosphotransferase compare
Psyr_4093 -0.9 -3.0 glutamate N-acetyltransferase compare
Psyr_0817 -0.9 -2.4 N-acetylmuramoyl-L-alanine amidase, family 2 compare
Psyr_0811 -0.9 -5.1 Integral membrane protein TerC compare
Psyr_3013 -0.9 -1.0 magnesium chelatase subunit ChlD compare
Psyr_4115 -0.9 -1.5 phosphoheptose isomerase compare
Psyr_3867 -0.9 -2.4 hypothetical protein compare
Psyr_0059 -0.9 -5.0 HemY, N-terminal:HemY, N-terminal:HemY, N-terminal compare
Psyr_0579 -0.8 -4.4 RNAse R compare
Psyr_3476 -0.8 -2.6 Flagellar basal body rod protein:Protein of unknown function DUF1078 compare
Psyr_4754 -0.8 -0.7 16S rRNA m(2)G-966 methyltransferase compare
Psyr_1885 -0.8 -1.5 hypothetical protein compare
Psyr_1040 -0.8 -1.6 RNA polymerase sigma factor, ECF subfamily compare
Psyr_3146 -0.8 -1.8 general secretion pathway protein J, putative compare
Psyr_4159 -0.8 -4.1 RNAse G compare
Psyr_1872 -0.8 -3.4 conserved hypothetical protein compare
Psyr_1160 -0.8 -5.9 Uncharacterized protein conserved in bacteria-like protein compare
Psyr_2137 -0.8 -2.1 molybdopterin molybdochelatase compare
Psyr_2032 -0.8 -4.0 two component transcriptional regulator, winged helix family compare
Psyr_4582 -0.8 -1.0 hypothetical protein compare
Psyr_0976 -0.7 -1.8 Malate:quinone-oxidoreductase compare
Psyr_2201 -0.7 -3.1 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family compare
Psyr_4822 -0.7 -1.5 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) compare
Psyr_2851 -0.7 -1.8 conserved hypothetical protein compare
Psyr_2456 -0.7 -1.8 Short-chain dehydrogenase/reductase SDR compare
Psyr_2259 -0.7 -2.7 Beta-lactamase-like protein compare
Psyr_4158 -0.7 -3.6 conserved hypothetical protein compare
Psyr_2292 -0.7 -1.5 L-glutaminase compare
Psyr_0983 -0.7 -3.2 Protein of unknown function DUF159 compare
Psyr_0497 -0.7 -1.8 LamB/YcsF compare
Psyr_0475 -0.7 -1.7 Protein of unknown function YGGT compare
Psyr_3459 -0.7 -1.6 Helix-turn-helix, Fis-type compare
Psyr_0394 -0.7 -2.5 Heat shock protein HslU compare
Psyr_1633 -0.7 -1.8 MotA/TolQ/ExbB proton channel compare
Psyr_4408 -0.7 -3.1 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_2669 -0.7 -2.1 Aminoglycoside phosphotransferase compare
Psyr_1780 -0.7 -1.7 transcriptional regulator, TetR family compare
Psyr_3176 -0.7 -2.1 camphor resistance protein CrcB compare
Psyr_4476 -0.7 -2.4 dTDP-4-dehydrorhamnose reductase compare
Psyr_0201 -0.7 -3.0 ATP-dependent DNA helicase RecG compare
Psyr_0437 -0.7 -1.5 acyl carrier protein, putative compare
Psyr_2112 -0.7 -1.2 Protein with unknown function DUF469 compare
Psyr_0519 -0.7 -4.2 Glutamate-ammonia-ligase adenylyltransferase compare
Psyr_0395 -0.7 -1.6 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_0436 -0.7 -1.2 Phosphopantetheine-binding protein compare
Psyr_2128 -0.7 -2.0 Protein of unknown function DUF6 compare
Psyr_4855 -0.7 -3.0 conserved hypothetical protein compare
Psyr_3324 -0.7 -2.2 transcriptional regulator, TetR family compare
Psyr_3954 -0.7 -2.2 GTP-binding protein LepA compare
Psyr_1544 -0.7 -3.0 SirA-like protein compare
Psyr_4941 -0.7 -1.9 NUDIX hydrolase compare
Psyr_4144 -0.6 -1.4 Protein of unknown function DUF1239 compare
Psyr_3947 -0.6 -1.5 Methyltransferase, putative compare
Psyr_4100 -0.6 -3.2 D-alanine--D-alanine ligase compare
Psyr_4454 -0.6 -1.5 HupE/UreJ protein compare
Psyr_2151 -0.6 -1.5 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_1499 -0.6 -2.5 Protein of unknown function DUF compare
Psyr_3808 -0.6 -0.9 hypothetical protein compare
Psyr_4781 -0.6 -3.5 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224 compare
Psyr_1594 -0.6 -2.8 FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type compare
Psyr_RNA61 -0.6 -2.1 tRNA-Gly compare
Psyr_4122 -0.6 -2.3 AFG1-like ATPase compare
Psyr_2017 -0.6 -3.1 Heat shock protein Hsp90:ATP-binding region, ATPase-like protein compare
Psyr_5096 -0.6 -2.0 hypothetical protein compare
Psyr_0806 -0.6 -3.7 conserved hypothetical protein compare
Psyr_4774 -0.6 -1.2 Hypothetical protein compare
Psyr_4622 -0.6 -1.6 Nucleotidyl transferase compare
Psyr_4140 -0.6 -1.0 Protein of unknown function DUF140 compare
Psyr_3315 -0.6 -1.7 conserved hypothetical protein compare
Psyr_0616 -0.6 -1.2 conserved domain protein compare
Psyr_0214 -0.6 -2.0 conserved hypothetical protein compare
Psyr_4420 -0.6 -1.9 precorrin-6A reductase compare
Psyr_0393 -0.6 -1.9 Protein of unknown function DUF971 compare
Psyr_0261 -0.6 -2.2 conserved hypothetical protein compare
Psyr_3955 -0.6 -2.0 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF compare
Psyr_0377 -0.6 -1.7 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_0573 -0.6 -2.4 GTP-binding protein HflX compare
Psyr_1751 -0.6 -1.9 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_3692 -0.6 -1.3 conserved hypothetical protein compare
Psyr_4898 -0.6 -3.3 aromatic amino acid aminotransferase apoenzyme compare
Psyr_2059 -0.6 -2.4 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer compare
Psyr_4050 -0.6 -1.8 Protein of unknown function DUF479 compare
Psyr_0845 -0.6 -1.5 conserved hypothetical protein compare
Psyr_4051 -0.6 -1.3 transcriptional regulator, ArsR family compare
Psyr_3450 -0.6 -2.2 Hpt compare
Psyr_4316 -0.6 -1.5 conserved hypothetical protein compare
Psyr_0275 -0.6 -2.7 Periplasmic solute binding protein compare
Psyr_2051 -0.6 -2.7 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_4995 -0.6 -1.6 RHS protein compare
Psyr_1786 -0.6 -2.3 membrane protein, putative compare
Psyr_2873 -0.5 -2.7 Acyl-CoA dehydrogenase, C-terminal compare
Psyr_2757 -0.5 -1.4 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0574 -0.5 -1.6 protease FtsH subunit HflK compare
Psyr_4944 -0.5 -2.4 transcriptional regulator, LysR family compare
Psyr_0784 -0.5 -1.4 CheW-like protein compare
Psyr_2461 -0.5 -2.0 Uncharacterized conserved protein UCP030820 compare
Psyr_0772 -0.5 -1.7 Protein of unknown function DUF1355 compare
Psyr_0914 -0.5 -2.9 Glycosyl transferase, group 1 compare
Psyr_2317 -0.5 -1.7 CDS compare
Psyr_0053 -0.5 -1.9 conserved hypothetical protein compare
Psyr_2030 -0.5 -1.7 Calcium-binding EF-hand compare
Psyr_3826 -0.5 -1.7 Peptidyl-prolyl cis-trans isomerase, cyclophilin type compare
Psyr_0212 -0.5 -2.0 Conserved hypothetical protein 255 compare
Psyr_1948 -0.5 -2.0 ABC transporter, periplasmic substrate-binding protein, putative compare
Psyr_4153 -0.5 -2.0 conserved hypothetical protein compare
Psyr_0267 -0.5 -2.5 Endonuclease/exonuclease/phosphatase compare
Psyr_1249 -0.5 -1.7 histidyl-tRNA synthetase compare
Psyr_0435 -0.5 -1.0 membrane protein, putative compare
Psyr_2848 -0.5 -2.1 hypothetical protein compare
Psyr_2847 -0.5 -1.1 hypothetical protein compare
Psyr_0673 -0.5 -2.5 nucleoside ABC transporter ATP-binding protein compare
Psyr_0034 -0.5 -1.2 tryptophan synthase, beta chain compare
Psyr_2977 -0.5 -2.5 cointegrate resolution protein T compare
Psyr_1118 -0.5 -1.6 Aldose 1-epimerase compare
Psyr_0364 -0.5 -1.9 sodium/proton antiporter, NhaA family compare
Psyr_2628 -0.5 -2.0 ABC transporter compare
Psyr_3425 -0.5 -1.3 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp compare
Psyr_4136 -0.5 -0.5 BolA-like protein compare
Psyr_2684 -0.5 -3.7 arginine deiminase compare
Psyr_0046 -0.5 -1.4 conserved hypothetical protein compare
Psyr_0936 -0.5 -3.3 Glycosyl transferase, group 1 compare
Psyr_3553 -0.5 -1.8 conserved hypothetical protein compare
Psyr_0565 -0.5 -2.4 Protein of unknown function UPF0126 compare
Psyr_0490 -0.5 -2.4 CheW-like protein compare
Psyr_0060 -0.5 -1.9 Protein of unknown function DUF513 compare
Psyr_1104 -0.5 -1.4 Heme oxygenase compare
Psyr_3183 -0.5 -2.4 ATP-dependent Clp protease ATP-binding subunit ClpA compare
Psyr_0492 -0.5 -3.3 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt compare
Psyr_5118 -0.5 -2.3 transcriptional regulator, DeoR family compare
Psyr_1410 -0.5 -1.2 Holliday junction DNA helicase RuvB compare
Psyr_4620 -0.5 -1.9 conserved hypothetical protein compare
Psyr_4733 -0.5 -2.2 betaine aldehyde dehydrogenase compare
Psyr_0303 -0.5 -1.7 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_1937 -0.5 -1.6 UspA compare
Psyr_0307 -0.5 -2.8 hypothetical protein compare
Psyr_2253 -0.5 -1.0 Phosphonate metabolism compare
Psyr_4598 -0.5 -1.9 lipoprotein, putative compare
Psyr_0982 -0.5 -0.8 conserved hypothetical protein compare
Psyr_3202 -0.5 -0.3 NADH dehydrogenase subunit G compare
Psyr_1069 -0.5 -1.7 molybdopterin synthase subunit MoaE compare
Psyr_2462 -0.5 -1.8 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress 6-methoxy-2(3H)-benzoxazolone across organisms