Experiment set18S33 for Pseudomonas syringae pv. syringae B728a

Compare to:

MBOA 0.5 mM

200 most detrimental genes:

  gene name fitness t score description  
Psyr_3567 +1.7 6.5 L-arginine ABC transporter ATP-binding protein / L-ornithine ABC transporter ATP-binding protein compare
Psyr_1668 +1.5 7.0 amidophosphoribosyltransferase compare
Psyr_1269 +1.5 4.3 phosphoribosylformylglycinamidine synthase compare
Psyr_1021 +1.3 7.3 Short-chain dehydrogenase/reductase SDR compare
Psyr_4491 +1.1 2.2 Deoxyribose-phosphate aldolase compare
Psyr_4380 +1.1 2.0 translation initiation factor 1 (eIF-1/SUI1) compare
Psyr_4480 +1.1 2.1 outer membrane transport energization protein TonB compare
Psyr_3701 +1.0 3.1 thioredoxin, putative compare
Psyr_3199 +1.0 1.7 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_0383 +0.9 1.1 Twin-arginine translocation protein TatB compare
Psyr_4860 +0.9 1.6 Integrase, catalytic region compare
Psyr_3905 +0.9 5.4 glycerol kinase compare
Psyr_2386 +0.9 3.1 hypothetical protein compare
Psyr_1968 +0.8 2.1 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_0350 +0.8 2.6 ABC transporter compare
Psyr_2562 +0.8 2.1 hypothetical protein compare
Psyr_4932 +0.8 6.0 agmatine deiminase compare
Psyr_2067 +0.8 1.6 ABC transporter compare
Psyr_3874 +0.8 5.1 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_1987 +0.8 2.2 2-keto-3-deoxygalactonate kinase compare
Psyr_2285 +0.8 1.2 Twin-arginine translocation pathway signal compare
Psyr_4955 +0.8 2.1 Protein of unknown function DUF1316 compare
Psyr_3674 +0.8 1.2 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase compare
Psyr_1748 +0.8 3.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_0822 +0.8 0.9 1-phosphofructokinase compare
Psyr_3896 +0.7 2.0 BFD-like [2Fe-2S]-binding region compare
Psyr_1334 +0.7 2.4 Cysteine desulfuration protein SufE compare
Psyr_1019 +0.7 3.4 Dihydroneopterin aldolase compare
Psyr_3915 +0.7 2.6 Alpha/beta hydrolase fold protein compare
Psyr_2719 +0.7 2.7 transcriptional regulator, TetR family compare
Psyr_0726 +0.7 2.3 ribosomal large subunit pseudouridine synthase D compare
Psyr_3934 +0.7 1.0 Short-chain dehydrogenase/reductase SDR compare
Psyr_4112 +0.7 4.9 Protein of unknown function UPF0011 compare
Psyr_2278 +0.7 3.0 luciferase compare
Psyr_3423 +0.7 5.2 coproporphyrinogen III oxidase, anaerobic compare
Psyr_1791 +0.7 1.9 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_1733 +0.7 1.6 Peptidyl-prolyl cis-trans isomerase, cyclophilin type compare
Psyr_1247 +0.7 1.1 conserved hypothetical protein compare
Psyr_2088 +0.7 1.2 2-methylaconitate cis-trans isomerase compare
Psyr_4007 +0.6 4.8 Secretion protein HlyD compare
Psyr_3566 +0.6 2.9 transcriptional regulator, AraC family compare
Psyr_2501 +0.6 1.2 Hemerythrin compare
Psyr_1722 +0.6 2.6 Amidohydrolase 2 compare
Psyr_1651 +0.6 3.7 Protein of unknown function DUF175 compare
Psyr_4008 +0.6 5.7 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_1097 +0.6 1.5 glycine cleavage system H protein compare
Psyr_4637 +0.6 2.3 acyl-phosphate glycerol-3-phosphate acyltransferase compare
Psyr_4916 +0.6 2.2 conserved hypothetical protein compare
Psyr_2557 +0.6 1.1 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein compare
Psyr_3458 +0.6 0.8 Flagellar hook-basal body complex protein FliE compare
Psyr_1085 +0.6 2.4 23S rRNA m(6)A-1618 methyltransferase compare
Psyr_4682 +0.6 1.6 conserved hypothetical protein compare
Psyr_4259 +0.6 4.8 ATP-dependent protease, putative compare
Psyr_1152 +0.6 1.7 transcriptional regulator, ArsR family compare
Psyr_4381 +0.6 5.1 arginine decarboxylase compare
Psyr_2894 +0.6 2.0 conserved hypothetical protein compare
Psyr_4463 +0.6 2.1 Protein of unknown function DUF193 compare
Psyr_1662 +0.6 3.0 tRNA pseudouridine synthase compare
Psyr_4786 +0.6 1.4 hypothetical protein compare
Psyr_0535 +0.6 1.4 toluene tolerance protein, putative compare
Psyr_2617 +0.6 2.4 Secretion protein HlyD compare
Psyr_3777 +0.6 2.5 conserved hypothetical protein compare
Psyr_4404 +0.6 1.6 tRNA-U20-dihydrouridine synthase compare
Psyr_3876 +0.6 4.8 amino acid ABC transporter membrane protein 2, PAAT family compare
Psyr_RNA28 +0.6 1.1 tRNA-Val compare
Psyr_2572 +0.6 2.8 ribose-5-phosphate isomerase compare
Psyr_3958 +0.6 3.7 RNA polymerase, sigma-24 subunit, RpoE compare
Psyr_1039 +0.6 1.8 FecR protein compare
Psyr_2493 +0.6 3.0 Major facilitator superfamily compare
Psyr_0132 +0.6 2.2 conserved hypothetical protein compare
Psyr_4285 +0.6 1.6 Ferredoxin:[2Fe-2S]-binding protein compare
Psyr_2668 +0.6 2.3 Helix-turn-helix, Fis-type compare
Psyr_3878 +0.6 3.9 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_2264 +0.6 1.8 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_1424 +0.6 1.3 Peptidase S24, S26A and S26B compare
Psyr_2765 +0.6 1.4 conserved domain protein compare
Psyr_1037 +0.5 2.7 ribosomal subunit interface protein, putative compare
Psyr_1329 +0.5 2.6 conserved hypothetical protein compare
Psyr_3224 +0.5 2.5 Low molecular weight phosphotyrosine protein phosphatase compare
Psyr_3703 +0.5 2.3 Flavodoxin/nitric oxide synthase compare
Psyr_4294 +0.5 2.0 Histone deacetylase family protein compare
Psyr_2118 +0.5 1.3 protein of unknown function DUF883 compare
Psyr_3739 +0.5 1.9 conserved hypothetical protein compare
Psyr_1154 +0.5 1.5 Copper/Zinc superoxide dismutase compare
Psyr_0858 +0.5 1.0 conserved hypothetical protein compare
Psyr_5135 +0.5 0.9 Protein of unknown function DUF37 compare
Psyr_2026 +0.5 1.4 conserved hypothetical protein compare
Psyr_0376 +0.5 1.8 D-tyrosyl-tRNA(Tyr) deacylase compare
Psyr_4278 +0.5 1.8 regulatory protein, LuxR compare
Psyr_3840 +0.5 2.0 conserved hypothetical protein compare
Psyr_4911 +0.5 2.8 amino acid ABC transporter ATP-binding protein, PAAT family compare
Psyr_4940 +0.5 1.0 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_1333 +0.5 2.3 UBA/THIF-type NAD/FAD binding fold protein compare
Psyr_0470 +0.5 1.8 conserved hypothetical protein compare
Psyr_1264 +0.5 2.7 hypothetical protein compare
Psyr_4799 +0.5 2.3 Heavy metal sensor kinase compare
Psyr_1458 +0.5 1.4 hypothetical protein compare
Psyr_5029 +0.5 1.5 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_2422 +0.5 1.7 transcriptional regulator, LysR family compare
Psyr_0690 +0.5 2.6 3-hydroxyisobutyrate dehydrogenase compare
Psyr_4015 +0.5 1.3 conserved domain protein compare
Psyr_4836 +0.5 3.3 N-formylglutamate deformylase compare
Psyr_3875 +0.5 3.3 amino acid ABC transporter membrane protein 1, PAAT family compare
Psyr_1614 +0.5 0.8 lipid A biosynthesis acyltransferase compare
Psyr_1190 +0.5 1.5 type III transcriptional regulator HrpR compare
Psyr_4933 +0.5 2.7 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_3118 +0.5 2.1 transcriptional regulator, GntR family compare
Psyr_0070 +0.5 1.5 hypothetical protein compare
Psyr_0639 +0.5 2.3 lipoprotein, putative compare
Psyr_0371 +0.5 3.2 conserved hypothetical protein compare
Psyr_3779 +0.5 1.4 GCN5-related N-acetyltransferase compare
Psyr_3377 +0.5 1.7 transcriptional regulator, MarR family compare
Psyr_2360 +0.5 1.8 CBS compare
Psyr_1138 +0.5 1.0 GCN5-related N-acetyltransferase compare
Psyr_3462 +0.5 1.4 conserved hypothetical protein compare
Psyr_1388 +0.5 2.5 Protein of unknown function UPF0066 compare
Psyr_0411 +0.5 4.0 glutamate synthase (NADPH) large subunit compare
Psyr_3257 +0.5 1.3 multisubunit potassium/proton antiporter, PhaG subunit compare
Psyr_2507 +0.4 1.0 Endoribonuclease L-PSP compare
Psyr_0173 +0.4 2.9 SSU ribosomal protein S6P modification protein compare
Psyr_4910 +0.4 1.9 hypothetical protein compare
Psyr_0076 +0.4 2.0 Xanthine phosphoribosyltransferase compare
Psyr_1868 +0.4 2.3 hypothetical protein compare
Psyr_4357 +0.4 3.3 HopAJ2 protein compare
Psyr_2227 +0.4 1.0 conserved hypothetical protein compare
Psyr_0979 +0.4 1.6 conserved hypothetical protein compare
Psyr_1140 +0.4 1.2 Disulfide bond formation protein DsbB compare
Psyr_3107 +0.4 1.0 conserved hypothetical protein compare
Psyr_3904 +0.4 2.8 Major intrinsic protein compare
Psyr_4130 +0.4 3.0 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF compare
Psyr_2337 +0.4 1.5 conserved hypothetical protein compare
Psyr_3286 +0.4 2.8 conserved hypothetical protein compare
Psyr_3479 +0.4 2.0 Flagellar hook capping protein compare
Psyr_0831 +0.4 0.8 Two-component response regulator CbrB compare
Psyr_0875 +0.4 2.0 outer membrane transport energization protein TonB compare
Psyr_1018 +0.4 1.2 Protein of unknown function DUF1244 compare
Psyr_1210 +0.4 2.3 type III secretion protein HrcQa compare
Psyr_4431 +0.4 1.9 Urease accessory protein UreD compare
Psyr_1554 +0.4 1.5 hypothetical protein compare
Psyr_1573 +0.4 1.2 cyclic nucleotide-binding protein compare
Psyr_3381 +0.4 1.7 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3256 +0.4 2.2 multisubunit potassium/proton antiporter, PhaF subunit compare
Psyr_3844 +0.4 1.3 conserved hypothetical protein compare
Psyr_4473 +0.4 2.6 OmpW compare
Psyr_0090 +0.4 3.1 4-aminobutyrate aminotransferase apoenzyme compare
Psyr_1721 +0.4 2.5 moxR protein, putative compare
Psyr_1372 +0.4 1.6 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_5036 +0.4 1.2 Response regulator receiver compare
Psyr_0160 +0.4 2.1 GCN5-related N-acetyltransferase compare
Psyr_0161 +0.4 2.8 Protein of unknown function DUF861 compare
Psyr_2126 +0.4 1.4 4-carboxymuconolactone decarboxylase compare
Psyr_3359 +0.4 1.6 Phenazine biosynthesis PhzC/PhzF protein compare
Psyr_3624 +0.4 2.0 transcriptional regulator, LysR family compare
Psyr_3568 +0.4 1.5 Succinylglutamate desuccinylase/aspartoacylase compare
Psyr_1949 +0.4 1.1 ABC-3 compare
Psyr_0314 +0.4 2.1 Flagellar basal body-associated protein FliL compare
Psyr_3569 +0.4 2.7 L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein compare
Psyr_2838 +0.4 1.5 conserved hypothetical protein compare
Psyr_2978 +0.4 2.3 PAS compare
Psyr_2212 +0.4 2.1 Arginase/agmatinase/formiminoglutamase compare
Psyr_1408 +0.4 0.5 Holliday junction endonuclease RuvC compare
Psyr_4739 +0.4 2.5 tRNA (guanine-N(7)-)-methyltransferase compare
Psyr_4388 +0.4 1.9 Response regulator receiver compare
Psyr_4418 +0.4 0.7 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_2752 +0.4 1.5 conserved hypothetical protein compare
Psyr_3774 +0.4 1.7 PAS compare
Psyr_0239 +0.4 1.9 cytochrome c5 compare
Psyr_4169 +0.4 1.5 4-carboxymuconolactone decarboxylase compare
Psyr_0812 +0.4 1.7 stress protein compare
Psyr_0356 +0.4 0.6 L-cystine ABC transporter ATP-binding protein / Diaminopimelate ABC transporter ATP-binding protein compare
Psyr_0281 +0.4 1.4 ABC transporter compare
Psyr_3571 +0.4 2.4 L-arginine-binding protein / L-ornithine-binding protein compare
Psyr_3394 +0.4 1.5 conserved hypothetical protein compare
Psyr_2247 +0.4 1.3 ABC transporter compare
Psyr_3879 +0.4 1.8 hypothetical protein compare
Psyr_0404 +0.4 1.3 Fimbrial assembly compare
Psyr_1859 +0.4 1.6 conserved hypothetical protein compare
Psyr_2189 +0.4 2.2 transcriptional regulator, ArsR family compare
Psyr_0887 +0.4 3.0 sensory box protein compare
Psyr_4296 +0.4 2.0 HI0933-like protein compare
Psyr_1127 +0.4 0.8 Heavy metal response regulator compare
Psyr_1642 +0.4 1.2 Maf-like protein compare
Psyr_0546 +0.4 1.4 lipoprotein, putative compare
Psyr_4092 +0.4 1.5 Glutathione S-transferase, N-terminal compare
Psyr_3151 +0.4 2.4 type II secretion system protein E (GspE) compare
Psyr_2960 +0.4 2.0 Binding-protein-dependent transport systems inner membrane component compare
Psyr_1609 +0.4 1.9 Aspartyl aminopeptidase compare
Psyr_4155 +0.4 1.3 Protein of unknown function DUF615 compare
Psyr_4874 +0.4 0.8 ABC transporter compare
Psyr_1746 +0.4 1.7 Trigger factor compare
Psyr_0986 +0.4 1.4 16S rRNA m(2)G 1207 methyltransferase compare
Psyr_3842 +0.4 1.6 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_2471 +0.4 0.7 hydroxymethylglutaryl-CoA lyase compare
Psyr_1153 +0.4 2.1 Zinc-containing alcohol dehydrogenase superfamily compare
Psyr_4601 +0.4 0.7 hypothetical protein compare
Psyr_1712 +0.4 1.9 conserved hypothetical protein compare
Psyr_3310 +0.4 1.9 transferase hexapeptide repeat protein compare
Psyr_1335 +0.4 1.7 Aminotransferase, class V compare
Psyr_3837 +0.4 1.2 conserved hypothetical protein compare
Psyr_2114 +0.4 1.4 two component transcriptional regulator, LuxR family compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress 6-methoxy-2(3H)-benzoxazolone across organisms